RNA–Protein interactions for RNA: ENST00000384619.1

RNVU1-17-201, Transcript of RNA, variant U1 small nuclear 17, humanhuman

BASIC

Gene RNVU1-17, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-17-201ENST00000384619 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 A6NJR5 290 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 DDX39AO00148 427 aaKnown RBP11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 PRPF40AO75400 957 aaKnown RBP11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 RPA1P27694 616 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 CCND3P30281 292 aaPredicted RBP11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 SLC26A2P50443 739 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 GJA9P57773 515 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 UBE2HP62256 183 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 SPIRE1Q08AE8 756 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 TRIM32Q13049 653 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 DGKDQ16760 1214 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 AXDND1Q5T1B0 1012 aaPredicted RBP11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 NCAPH2Q6IBW4 605 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 ABHD15Q6UXT9 468 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 RNF180Q86T96 592 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 TLK2Q86UE8 772 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 PCSK9Q8NBP7 692 aaKnown RBP11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 SH3TC2Q8TF17 1288 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 ATP6V0A1Q93050 837 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 ARMC5Q96C12 935 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 CCDC34Q96HJ3 373 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 CDK5RAP3Q96JB5 506 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 UIMC1Q96RL1 719 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 GPR20Q99678 358 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 HSD17B14Q9BPX1 270 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 POLR3CQ9BUI4 534 aaPredicted RBP11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 CCSER1Q9C0I3 900 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 NT5C3AQ9H0P0 336 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 SMARCAD1Q9H4L7 1026 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 GDPD2Q9HCC8 539 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 TUFT1Q9NNX1 390 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 XPNPEP3Q9NQH7 507 aa11.16□□□□□ -0.62
RNVU1-17-201ENST00000384619 KDM3AQ9Y4C1 1321 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 COL11A1P12107 1806 aaPredicted RBP11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 DDX11L8A8MPP1 907 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 BACH1O14867 736 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 CHMP2AO43633 222 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 CCNE2O96020 404 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 SUPT20HL2P0C7V6 817 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 XRCC6P12956 609 aaKnown RBP eCLIP11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 TCF7P36402 384 aaPredicted RBP11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 CCT6AP40227 531 aaKnown RBP11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 QARSP47897 775 aaKnown RBP11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 STAT5BP51692 787 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 PSMC5P62195 406 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 FSCN1Q16658 493 aaKnown RBP11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 HSDL1Q3SXM5 330 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 GNASQ5JWF2 1037 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 RESP18Q5W5W9 173 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 SWSAP1Q6NVH7 229 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 OTUD6AQ7L8S5 288 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 PLPPR4Q7Z2D5 763 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 CABP7Q86V35 215 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 RASSF8Q8NHQ8 419 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 AFG1LQ8WV93 481 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 COPS5Q92905 334 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 GJA10Q969M2 543 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 CHAMP1Q96JM3 812 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 CLIC6Q96NY7 704 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 EIF2AK1Q9BQI3 630 aaKnown RBP11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 RNF208Q9H0X6 261 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 UPF3AQ9H1J1 476 aaKnown RBP11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 ZSWIM4Q9H7M6 989 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 NRBP2Q9NSY0 501 aa11.15□□□□□ -0.62
RNVU1-17-201ENST00000384619 IGKV6D-21A0A0A0MT36 114 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 GSTTP1A0A1W2PQM5 241 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 POTEMA6NI47 508 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 SLITRK3O94933 977 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 C6orf222P0C671 652 aaPredicted RBP11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 HOXD8P13378 290 aaPredicted RBP11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 CCL5P13501 91 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 MCM4P33991 863 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 SP4Q02446 784 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 SHC4Q6S5L8 630 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 CCDC73Q6ZRK6 1079 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 TPH2Q8IWU9 490 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 C4orf19Q8IY42 314 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 IQUBQ8NA54 791 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 AFAP1L1Q8TED9 768 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 SNX29Q8TEQ0 813 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 MRPS27Q92552 414 aaKnown RBP11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 GLG1Q92896 1179 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 ZNF333Q96JL9 665 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 NACC1Q96RE7 527 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 TSEN34Q9BSV6 310 aaKnown RBP11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 BCAS3Q9H6U6 928 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 PAK6Q9NQU5 681 aaPredicted RBP11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 ZNF302Q9NR11 478 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 USP25Q9UHP3 1055 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 ZNF215Q9UL58 517 aaPredicted RBP11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 DNM3Q9UQ16 869 aa11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 MAFBQ9Y5Q3 323 aaPredicted RBP11.14□□□□□ -0.63
RNVU1-17-201ENST00000384619 FAM237AA0A1B0GTK4 181 aa11.13□□□□□ -0.63
RNVU1-17-201ENST00000384619 EML1O00423 815 aa11.13□□□□□ -0.63
RNVU1-17-201ENST00000384619 LGR5O75473 907 aa11.13□□□□□ -0.63
RNVU1-17-201ENST00000384619 CABYRO75952 493 aa11.13□□□□□ -0.63
RNVU1-17-201ENST00000384619 LYPLA2O95372 231 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms