RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 HELBQ8NG08 1087 aaPredicted RBP22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 ATXN2LQ8WWM7 1075 aaKnown RBP22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 NAF1Q96HR8 494 aaKnown RBP22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 DISC1Q9NRI5 854 aa22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 MYH1P12882 1939 aa22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 MAP3K13O43283 966 aa22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 ALX1Q15699 326 aa22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 SLC4A9Q96Q91 983 aa22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 ABCA3Q99758 1704 aa22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 F8VZ95 297 aa22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 DAPK3O43293 454 aa22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 PDE8AO60658 829 aa22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 CYP19A1P11511 503 aaPredicted RBP22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 ARID4AP29374 1257 aaPredicted RBP22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 ROR2Q01974 943 aaKnown RBP22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 IFI16Q16666 785 aaKnown RBP22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 TRIM68Q6AZZ1 485 aa22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 BAP1Q92560 729 aa22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 SELENOSQ9BQE4 189 aa22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 AP1M1Q9BXS5 423 aa22.5■■□□□ 1.19
TMEFF1-201ENST00000374879 TCRBV5S4A2TA0A5A2 114 aa22.49■■□□□ 1.19
TMEFF1-201ENST00000374879 DHX9Q08211 1270 aaKnown RBP22.49■■□□□ 1.19
TMEFF1-201ENST00000374879 TDRD12Q587J7 1177 aaKnown RBP22.49■■□□□ 1.19
TMEFF1-201ENST00000374879 NLRP3Q96P20 1036 aa22.49■■□□□ 1.19
TMEFF1-201ENST00000374879 PIDD1Q9HB75 910 aa22.49■■□□□ 1.19
TMEFF1-201ENST00000374879 ADAM22Q9P0K1 906 aa22.49■■□□□ 1.19
TMEFF1-201ENST00000374879 KAT6BQ8WYB5 2073 aa22.49■■□□□ 1.19
TMEFF1-201ENST00000374879 PP2D1A8MPX8 630 aa22.49■■□□□ 1.19
TMEFF1-201ENST00000374879 NAB2Q15742 525 aa22.49■■□□□ 1.19
TMEFF1-201ENST00000374879 CCDC178Q5BJE1 867 aa22.49■■□□□ 1.19
TMEFF1-201ENST00000374879 HGSNATQ68CP4 663 aa22.49■■□□□ 1.19
TMEFF1-201ENST00000374879 MYH3P11055 1940 aa22.49■■□□□ 1.19
TMEFF1-201ENST00000374879 SPDYE5A6NIY4 337 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 KCNK3O14649 394 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 PYGLP06737 847 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 VIMP08670 466 aaKnown RBP22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 UQCRFS1P1P0C7P4 283 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 VWA3BQ502W6 1294 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 CACNA2D4Q7Z3S7 1137 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 SCFD2Q8WU76 684 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 IQCDQ96DY2 449 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 BICDL2A1A5D9 508 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 BHMG1C9JSJ3 638 aaPredicted RBP22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 ADAMTS3O15072 1205 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 PLEKHA8P1O95397 391 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 CCNG1P51959 295 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 PUM3Q15397 648 aaKnown RBP22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 TMTC2Q8N394 836 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 KLHL29Q96CT2 875 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 PRMT1Q99873 361 aaKnown RBP22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 DDX47Q9H0S4 455 aaKnown RBP22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 ADAM7Q9H2U9 754 aa22.48■■□□□ 1.19
TMEFF1-201ENST00000374879 SPDYE3A6NKU9 549 aa22.47■■□□□ 1.19
TMEFF1-201ENST00000374879 SHBGP04278 402 aa22.47■■□□□ 1.19
TMEFF1-201ENST00000374879 TUBP50607 506 aa22.47■■□□□ 1.19
TMEFF1-201ENST00000374879 FUT2Q10981 343 aa22.47■■□□□ 1.19
TMEFF1-201ENST00000374879 STK4Q13043 487 aa22.47■■□□□ 1.19
TMEFF1-201ENST00000374879 LAMB3Q13751 1172 aa22.47■■□□□ 1.19
TMEFF1-201ENST00000374879 ZCWPW1Q9H0M4 648 aa22.47■■□□□ 1.19
TMEFF1-201ENST00000374879 MYH2Q9UKX2 1941 aa22.47■■□□□ 1.19
TMEFF1-201ENST00000374879 LONP1P36776 959 aaKnown RBP22.47■■□□□ 1.19
TMEFF1-201ENST00000374879 ANO7Q6IWH7 933 aa22.47■■□□□ 1.19
TMEFF1-201ENST00000374879 CHD4Q14839 1912 aa22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 PRPF3O43395 683 aaKnown RBP22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 KIF5BP33176 963 aa22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 MSH2P43246 934 aa22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 GCLCP48506 637 aaPredicted RBP22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 PDXDC1Q6P996 788 aa22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 TEX9Q8N6V9 391 aa22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 BTG4Q9NY30 223 aa22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 CD2APQ9Y5K6 639 aa22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 ITGB4P16144 1822 aa22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 RBAK-RBAKDNI3L0D1 243 aa22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 PRKAB2O43741 272 aa22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 RPUSD2Q8IZ73 545 aaKnown RBP22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 MAGEB6Q8N7X4 407 aa22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 TAF4BQ92750 862 aa22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 EZH1Q92800 747 aaPredicted RBP22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 ARMT1Q9H993 441 aa22.46■■□□□ 1.19
TMEFF1-201ENST00000374879 SSU72P8A0A1W2PR75 194 aa22.45■■□□□ 1.19
TMEFF1-201ENST00000374879 CEP104O60308 925 aa22.45■■□□□ 1.19
TMEFF1-201ENST00000374879 MBD4O95243 580 aa22.45■■□□□ 1.19
TMEFF1-201ENST00000374879 FCER1AP12319 257 aa22.45■■□□□ 1.19
TMEFF1-201ENST00000374879 MXRA7P84157 204 aa22.45■■□□□ 1.19
TMEFF1-201ENST00000374879 DZIP3Q86Y13 1208 aaKnown RBP22.45■■□□□ 1.19
TMEFF1-201ENST00000374879 SPATA5Q8NB90 893 aa22.45■■□□□ 1.19
TMEFF1-201ENST00000374879 LRRC15Q8TF66 581 aa22.45■■□□□ 1.19
TMEFF1-201ENST00000374879 TEKT4Q8WW24 435 aa22.45■■□□□ 1.19
TMEFF1-201ENST00000374879 AMACRQ9UHK6 382 aa22.45■■□□□ 1.19
TMEFF1-201ENST00000374879 ATP8A1Q9Y2Q0 1164 aa22.45■■□□□ 1.19
TMEFF1-201ENST00000374879 SNAP23O00161 211 aa22.45■■□□□ 1.18
TMEFF1-201ENST00000374879 MMP13P45452 471 aa22.45■■□□□ 1.18
TMEFF1-201ENST00000374879 PDE4DQ08499 809 aa22.45■■□□□ 1.18
TMEFF1-201ENST00000374879 PTPROQ16827 1216 aa22.45■■□□□ 1.18
TMEFF1-201ENST00000374879 GALNTL6Q49A17 601 aa22.45■■□□□ 1.18
TMEFF1-201ENST00000374879 GALNT15Q8N3T1 639 aa22.45■■□□□ 1.18
TMEFF1-201ENST00000374879 TRIM33Q9UPN9 1127 aa22.45■■□□□ 1.18
TMEFF1-201ENST00000374879 FGFR2P21802 821 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 SEPT2Q15019 361 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms