RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 HOXA7P31268 230 aaPredicted RBP13.42□□□□□ -0.26
HMGCL-202ENST00000374487 CBX1P83916 185 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 ARHGAP4P98171 946 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 ZNF569Q5MCW4 686 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 FBXO38Q6PIJ6 1188 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 SPICE1Q8N0Z3 855 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 BRI3BPQ8WY22 251 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 DNAJC7Q99615 494 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 CHP1Q99653 195 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 TSG101Q99816 390 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 HERC5Q9UII4 1024 aaKnown RBP13.42□□□□□ -0.26
HMGCL-202ENST00000374487 EPN1Q9Y6I3 576 aaPredicted RBP13.42□□□□□ -0.26
HMGCL-202ENST00000374487 A0A0U1RQJ8 604 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 FOSP01100 380 aaPredicted RBP13.42□□□□□ -0.26
HMGCL-202ENST00000374487 PTPRAP18433 802 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 LRRC63Q05C16 580 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 PRR16Q569H4 304 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 ATRIPQ8WXE1 791 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 HOOK2Q96ED9 719 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 KCNMB3Q9NPA1 279 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 PANK4Q9NVE7 773 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 MRFAP1Q9Y605 127 aa13.42□□□□□ -0.26
HMGCL-202ENST00000374487 COL2A1P02458 1487 aaPredicted RBP13.42□□□□□ -0.26
HMGCL-202ENST00000374487 TBC1D12O60347 775 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 NDUFA10O95299 355 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 HSPA8P11142 646 aaKnown RBP13.41□□□□□ -0.26
HMGCL-202ENST00000374487 PPP2R3AQ06190 1150 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 LRRC41Q15345 812 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 COL13A1Q5TAT6 717 aaPredicted RBP13.41□□□□□ -0.26
HMGCL-202ENST00000374487 MOXD1Q6UVY6 613 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 ERO1BQ86YB8 467 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 SCYL3Q8IZE3 742 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 ARHGEF10LQ9HCE6 1279 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 CTAGE9A4FU28 777 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 E9PMD0 336 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 TADA3O75528 432 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 ZBTB48P10074 688 aaPredicted RBP13.41□□□□□ -0.26
HMGCL-202ENST00000374487 CAP2P40123 477 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 MIIPQ5JXC2 388 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 HYIQ5T013 277 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 CCDC65Q8IXS2 484 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 MYOCDQ8IZQ8 938 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 AGPAT5Q9NUQ2 364 aa13.41□□□□□ -0.26
HMGCL-202ENST00000374487 CCL15-CCL14A0A0B4J2E2 113 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 A0A1W2PRG0 241 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 POTEB3A0JP26 581 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 CTNND1O60716 968 aaKnown RBP13.4□□□□□ -0.26
HMGCL-202ENST00000374487 KRT18P05783 430 aaKnown RBP13.4□□□□□ -0.26
HMGCL-202ENST00000374487 PLA2G4BP0C869 781 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 STAT3P40763 770 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 TM4SF4P48230 202 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 KLK7P49862 253 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 COASYQ13057 564 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 CCL15Q16663 113 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 VWA3BQ502W6 1294 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 NOL9Q5SY16 702 aaKnown RBP13.4□□□□□ -0.26
HMGCL-202ENST00000374487 HAUS3Q68CZ6 603 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 POTEBQ6S5H4 581 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 IFNL1Q8IU54 200 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 ERMNQ8TAM6 284 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 DNAJC19Q96DA6 116 aa13.4□□□□□ -0.26
HMGCL-202ENST00000374487 ARGLU1Q9NWB6 273 aaPredicted RBP13.4□□□□□ -0.26
HMGCL-202ENST00000374487 SLC26A4O43511 780 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 IPO7O95373 1038 aaKnown RBP13.39□□□□□ -0.27
HMGCL-202ENST00000374487 ZNF76P36508 570 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 STAT2P52630 851 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 ZBED6P86452 979 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 TRAF1Q13077 416 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 FAM26FQ5R3K3 315 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 BTNL9Q6UXG8 535 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 GPBP1Q86WP2 473 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 MBOAT7Q96N66 472 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 ERGIC2Q96RQ1 377 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 BEGAINQ9BUH8 593 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 NDST4Q9H3R1 872 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 GOPCQ9HD26 462 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 OGFRQ9NZT2 677 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 MYO1AQ9UBC5 1043 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 PRR12Q9ULL5 1215 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 SYNPO2Q9UMS6 1093 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 TBX3O15119 743 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 ECM2O94769 699 aaPredicted RBP13.39□□□□□ -0.27
HMGCL-202ENST00000374487 HOXA13P31271 388 aaPredicted RBP13.39□□□□□ -0.27
HMGCL-202ENST00000374487 KRT83P78385 493 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 PPATQ06203 517 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 EHHADHQ08426 723 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 MOGSQ13724 837 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 MAN2A1Q16706 1144 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 Q4G0T1 1027 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 HERC4Q5GLZ8 1057 aaPredicted RBP13.39□□□□□ -0.27
HMGCL-202ENST00000374487 NCAPH2Q6IBW4 605 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 WDR59Q6PJI9 974 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 IQCDQ96DY2 449 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 PICK1Q9NRD5 415 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 TBC1D7Q9P0N9 293 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 AFG3L2Q9Y4W6 797 aa13.39□□□□□ -0.27
HMGCL-202ENST00000374487 UNCXA6NJT0 531 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 KIF20AO95235 890 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 CYLC1P35663 651 aaPredicted RBP13.38□□□□□ -0.27
HMGCL-202ENST00000374487 SREBF1P36956 1147 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms