RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CATSPERGQ6ZRH7 1159 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 CNGA4Q8IV77 575 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 MB21D1Q8N884 522 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 REPS2Q8NFH8 660 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 DYDC2Q96IM9 177 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 UNC45AQ9H3U1 944 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 A0A1W2PQC6 194 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 RAD51AP2Q09MP3 1159 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 CTTNQ14247 550 aaKnown RBP27.75■■■□□ 2.03
CTSA-203ENST00000372459 SLC30A10Q6XR72 485 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 GLIS3Q8NEA6 775 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 IL31RAQ8NI17 732 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 CPLX3Q8WVH0 158 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 TAAR1Q96RJ0 339 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 BHMT2Q9H2M3 363 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 RNF146Q9NTX7 359 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 UBIAD1Q9Y5Z9 338 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 RLFQ13129 1914 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 PES1O00541 588 aaKnown RBP27.74■■■□□ 2.03
CTSA-203ENST00000372459 MFAP3LO75121 409 aa27.74■■■□□ 2.03
CTSA-203ENST00000372459 GYPCP04921 128 aa27.74■■■□□ 2.03
CTSA-203ENST00000372459 YBX3P16989 372 aaKnown RBP eCLIP27.74■■■□□ 2.03
CTSA-203ENST00000372459 MTIF2P46199 727 aaKnown RBP27.74■■■□□ 2.03
CTSA-203ENST00000372459 DNM2P50570 870 aa27.74■■■□□ 2.03
CTSA-203ENST00000372459 MAP3K9P80192 1104 aa27.74■■■□□ 2.03
CTSA-203ENST00000372459 EPHA7Q15375 998 aa27.74■■■□□ 2.03
CTSA-203ENST00000372459 CEP135Q66GS9 1140 aa27.74■■■□□ 2.03
CTSA-203ENST00000372459 B3GNT9Q6UX72 402 aa27.74■■■□□ 2.03
CTSA-203ENST00000372459 NYAP1Q6ZVC0 841 aa27.74■■■□□ 2.03
CTSA-203ENST00000372459 TPH2Q8IWU9 490 aa27.74■■■□□ 2.03
CTSA-203ENST00000372459 RBM46Q8TBY0 533 aaKnown RBP27.74■■■□□ 2.03
CTSA-203ENST00000372459 ZNF507Q8TCN5 953 aa27.74■■■□□ 2.03
CTSA-203ENST00000372459 CCDC51Q96ER9 411 aa27.74■■■□□ 2.03
CTSA-203ENST00000372459 KCNH7Q9NS40 1196 aa27.74■■■□□ 2.03
CTSA-203ENST00000372459 CASP14P31944 242 aa27.73■■■□□ 2.03
CTSA-203ENST00000372459 C9orf131Q5VYM1 1079 aa27.73■■■□□ 2.03
CTSA-203ENST00000372459 NSMFQ6X4W1 530 aa27.73■■■□□ 2.03
CTSA-203ENST00000372459 EEF2KMTQ96G04 330 aa27.73■■■□□ 2.03
CTSA-203ENST00000372459 PPP1R13BQ96KQ4 1090 aa27.73■■■□□ 2.03
CTSA-203ENST00000372459 NAA15Q9BXJ9 866 aaKnown RBP27.73■■■□□ 2.03
CTSA-203ENST00000372459 JADE2Q9NQC1 790 aa27.73■■■□□ 2.03
CTSA-203ENST00000372459 TBC1D7Q9P0N9 293 aa27.73■■■□□ 2.03
CTSA-203ENST00000372459 TKFCQ3LXA3 575 aa27.73■■■□□ 2.03
CTSA-203ENST00000372459 SH3D19Q5HYK7 790 aa27.73■■■□□ 2.03
CTSA-203ENST00000372459 SNRNP48Q6IEG0 339 aaKnown RBP27.73■■■□□ 2.03
CTSA-203ENST00000372459 REEP2Q9BRK0 252 aa27.73■■■□□ 2.03
CTSA-203ENST00000372459 ZHX3Q9H4I2 956 aa27.73■■■□□ 2.03
CTSA-203ENST00000372459 SNCAIPQ9Y6H5 919 aa27.73■■■□□ 2.03
CTSA-203ENST00000372459 EIF2AK2P19525 551 aaKnown RBP27.72■■■□□ 2.03
CTSA-203ENST00000372459 MRPS9P82933 396 aaKnown RBP27.72■■■□□ 2.03
CTSA-203ENST00000372459 VGLL4Q14135 290 aa27.72■■■□□ 2.03
CTSA-203ENST00000372459 PGM5Q15124 567 aa27.72■■■□□ 2.03
CTSA-203ENST00000372459 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.72■■■□□ 2.03
CTSA-203ENST00000372459 RMDN3Q96TC7 470 aa27.72■■■□□ 2.03
CTSA-203ENST00000372459 RIPK3Q9Y572 518 aa27.72■■■□□ 2.03
CTSA-203ENST00000372459 COL11A1P12107 1806 aaPredicted RBP27.72■■■□□ 2.03
CTSA-203ENST00000372459 PPP1R12BO60237 982 aaPredicted RBP27.71■■■□□ 2.03
CTSA-203ENST00000372459 NEK9Q8TD19 979 aa27.71■■■□□ 2.03
CTSA-203ENST00000372459 NOC4LQ9BVI4 516 aaKnown RBP27.71■■■□□ 2.03
CTSA-203ENST00000372459 PXMP2Q9NR77 195 aa27.71■■■□□ 2.03
CTSA-203ENST00000372459 HOXC10Q9NYD6 342 aa27.71■■■□□ 2.03
CTSA-203ENST00000372459 ZNF214Q9UL59 606 aaPredicted RBP27.71■■■□□ 2.03
CTSA-203ENST00000372459 MYPNQ86TC9 1320 aa27.71■■■□□ 2.03
CTSA-203ENST00000372459 B4DLN1 442 aa27.71■■■□□ 2.03
CTSA-203ENST00000372459 ADM5C9JUS6 153 aa27.71■■■□□ 2.03
CTSA-203ENST00000372459 ATP2A1O14983 1001 aa27.71■■■□□ 2.03
CTSA-203ENST00000372459 NACC1Q96RE7 527 aa27.71■■■□□ 2.03
CTSA-203ENST00000372459 AGO4Q9HCK5 861 aaKnown RBP27.71■■■□□ 2.03
CTSA-203ENST00000372459 KIF2AO00139 706 aaPredicted RBP27.7■■■□□ 2.03
CTSA-203ENST00000372459 FXR1P51114 621 aaKnown RBP eCLIP27.7■■■□□ 2.03
CTSA-203ENST00000372459 MTMR1Q13613 665 aa27.7■■■□□ 2.03
CTSA-203ENST00000372459 ZCWPW2Q504Y3 356 aa27.7■■■□□ 2.03
CTSA-203ENST00000372459 ARHGEF16Q5VV41 709 aa27.7■■■□□ 2.03
CTSA-203ENST00000372459 PDCD2LQ9BRP1 358 aa27.7■■■□□ 2.03
CTSA-203ENST00000372459 FGFBP2Q9BYJ0 223 aa27.7■■■□□ 2.03
CTSA-203ENST00000372459 CSADQ9Y600 493 aa27.7■■■□□ 2.03
CTSA-203ENST00000372459 FKBP3Q00688 224 aaKnown RBP27.69■■■□□ 2.02
CTSA-203ENST00000372459 TMEM132BQ14DG7 1078 aa27.69■■■□□ 2.02
CTSA-203ENST00000372459 PIGOQ8TEQ8 1089 aa27.69■■■□□ 2.02
CTSA-203ENST00000372459 RUSC1Q9BVN2 902 aa27.69■■■□□ 2.02
CTSA-203ENST00000372459 WDR90Q96KV7 1748 aa27.69■■■□□ 2.02
CTSA-203ENST00000372459 ZSCAN12O43309 604 aa27.69■■■□□ 2.02
CTSA-203ENST00000372459 TBCAO75347 108 aaKnown RBP27.69■■■□□ 2.02
CTSA-203ENST00000372459 BAATQ14032 418 aaPredicted RBP27.69■■■□□ 2.02
CTSA-203ENST00000372459 RINT1Q6NUQ1 792 aa27.69■■■□□ 2.02
CTSA-203ENST00000372459 DPY19L2Q6NUT2 758 aa27.69■■■□□ 2.02
CTSA-203ENST00000372459 LRRC55Q6ZSA7 311 aa27.69■■■□□ 2.02
CTSA-203ENST00000372459 SCFD1Q8WVM8 642 aa27.69■■■□□ 2.02
CTSA-203ENST00000372459 TEX13BQ9BXU2 312 aa27.69■■■□□ 2.02
CTSA-203ENST00000372459 DDX39AO00148 427 aaKnown RBP27.68■■■□□ 2.02
CTSA-203ENST00000372459 TBC1D8BQ0IIM8 1120 aa27.68■■■□□ 2.02
CTSA-203ENST00000372459 MIIPQ5JXC2 388 aa27.68■■■□□ 2.02
CTSA-203ENST00000372459 XRRA1Q6P2D8 792 aa27.68■■■□□ 2.02
CTSA-203ENST00000372459 DLK2Q6UY11 383 aa27.68■■■□□ 2.02
CTSA-203ENST00000372459 MIER3Q7Z3K6 550 aa27.68■■■□□ 2.02
CTSA-203ENST00000372459 COL4A3BPQ9Y5P4 624 aa27.68■■■□□ 2.02
CTSA-203ENST00000372459 MYCLP12524 364 aaPredicted RBP27.68■■■□□ 2.02
CTSA-203ENST00000372459 SFR1Q86XK3 245 aa27.68■■■□□ 2.02
CTSA-203ENST00000372459 LXNQ9BS40 222 aa27.68■■■□□ 2.02
CTSA-203ENST00000372459 TBC1D22BQ9NU19 505 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms