RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 FBXO2Q9UK22 296 aaPredicted RBP9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 GOLGA4Q13439 2230 aaKnown RBP9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 TRAPPC10P48553 1259 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 STK4Q13043 487 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 RETREG2Q8NC44 543 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 HAUS1Q96CS2 278 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 CEP170P1Q96L14 293 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 ZNF341Q9BYN7 854 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 ZNF277Q9NRM2 450 aaPredicted RBP9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 FAM184BQ9ULE4 1060 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 CD2APQ9Y5K6 639 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 POC1B-GALNT4F8VUJ3 575 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 TCP1P17987 556 aaKnown RBP9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 CDC25BP30305 580 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 PEX3P56589 373 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 MTM1Q13496 603 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 CASP8Q14790 479 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 ASPRV1Q53RT3 343 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 CC2D2BQ6DHV5 1058 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 OTUD6AQ7L8S5 288 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 CERS3Q8IU89 383 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 SULF1Q8IWU6 871 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 ZNF526Q8TF50 670 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 DHTKD1Q96HY7 919 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 TEKT3Q9BXF9 490 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 ABHD10Q9NUJ1 306 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 TXNDC16Q9P2K2 825 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 CAPN7Q9Y6W3 813 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 INO80B-WBP1J3KQ70 363 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 EEF1GP26641 437 aaKnown RBP9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 GCLMP48507 274 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 ZBED6P86452 979 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 ALKBH5Q6P6C2 394 aaKnown RBP9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 SCARA5Q6ZMJ2 495 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 VSIG1Q86XK7 387 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 RNF34Q969K3 372 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 LRRC45Q96CN5 670 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 BRIP1Q9BX63 1249 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 INO80BQ9C086 356 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 PI4KBQ9UBF8 816 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 RGS17Q9UGC6 210 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 PCDHA13Q9Y5I0 950 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 ADGRG1Q9Y653 693 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 IVNS1ABPQ9Y6Y0 642 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 KDM3AQ9Y4C1 1321 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 DLG5Q8TDM6 1919 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 F5H6K3 240 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 ZBTB22O15209 634 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 RGS16O15492 202 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 CRKP46108 304 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 POLGP54098 1239 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 CCZ1BP86790 482 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 CCZ1P86791 482 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 KLRC3Q07444 240 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 PPFIA1Q13136 1202 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 QRICH1Q2TAL8 776 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 LMBRD2Q68DH5 695 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 ANKRD40Q6AI12 368 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 NAP1L4Q99733 375 aaKnown RBP9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 MRPL11Q9Y3B7 192 aaKnown RBP9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 SCN11AQ9UI33 1791 aa9.93□□□□□ -0.82
SMARCA1-202ENST00000371122 TUBBP07437 444 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 TSGA10IPQ3SY00 556 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 PASD1Q8IV76 773 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 GLT8D2Q9H1C3 349 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 ZNF148Q9UQR1 794 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 SRGAP2CP0DJJ0 459 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 SAT1P21673 171 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 STAT2P52630 851 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 ZNF131P52739 623 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 IFT88Q13099 833 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 FAM47CQ5HY64 1035 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 DENND2CQ68D51 928 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 SARM1Q6SZW1 724 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 C3orf67Q6ZVT6 689 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 ADGRA1Q86SQ6 560 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 SGMS1Q86VZ5 419 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 FMNL3Q8IVF7 1028 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 LINC00116Q8NCU8 138 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 HEMGNQ9BXL5 484 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 RAVER2Q9HCJ3 691 aaKnown RBP9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 TRPC5Q9UL62 973 aaPredicted RBP9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 HNRNPH2P55795 449 aaKnown RBP9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 TFAMQ00059 246 aaKnown RBP9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 SYDE2Q5VT97 1194 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 RAD9BQ6WBX8 426 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 SLFN12Q8IYM2 578 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 ADGRF4Q8IZF3 695 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 CAPS2Q9BXY5 557 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 PPP1R12CQ9BZL4 782 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 FAM169AQ9Y6X4 670 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 ABCC12Q96J65 1359 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 CAMTA2O94983 1202 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 MAN1A1P33908 653 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 MYL7Q01449 175 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 EVX2Q03828 476 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 TRIM28Q13263 835 aaKnown RBP9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 CCDC17Q96LX7 622 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms