RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 RPAP3Q9H6T3 665 aaPredicted RBP10.72□□□□□ -0.69
SCAF11-202ENST00000369367 PFASO15067 1338 aa10.71□□□□□ -0.69
SCAF11-202ENST00000369367 DPYSL4O14531 572 aa10.71□□□□□ -0.69
SCAF11-202ENST00000369367 ARL4AP40617 200 aa10.71□□□□□ -0.69
SCAF11-202ENST00000369367 CCDC6Q16204 474 aa10.71□□□□□ -0.69
SCAF11-202ENST00000369367 LINC00116Q8NCU8 138 aa10.71□□□□□ -0.69
SCAF11-202ENST00000369367 FBXO41Q8TF61 875 aa10.71□□□□□ -0.69
SCAF11-202ENST00000369367 P2RX5Q93086 422 aa10.71□□□□□ -0.69
SCAF11-202ENST00000369367 VPS33BQ9H267 617 aa10.71□□□□□ -0.69
SCAF11-202ENST00000369367 MXI1P50539 228 aa10.71□□□□□ -0.69
SCAF11-202ENST00000369367 LRRC63Q05C16 580 aa10.71□□□□□ -0.69
SCAF11-202ENST00000369367 MAN2A1Q16706 1144 aa10.71□□□□□ -0.69
SCAF11-202ENST00000369367 NME8Q8N427 588 aa10.71□□□□□ -0.69
SCAF11-202ENST00000369367 MYCP01106 439 aaPredicted RBP10.71□□□□□ -0.69
SCAF11-202ENST00000369367 RPLP2P05387 115 aaKnown RBP10.71□□□□□ -0.69
SCAF11-202ENST00000369367 MCM6Q14566 821 aa10.71□□□□□ -0.69
SCAF11-202ENST00000369367 BZW1Q7L1Q6 419 aaKnown RBP10.71□□□□□ -0.69
SCAF11-202ENST00000369367 ZNF512BQ96KM6 892 aaPredicted RBP10.71□□□□□ -0.69
SCAF11-202ENST00000369367 SLC38A10Q9HBR0 1119 aa10.71□□□□□ -0.69
SCAF11-202ENST00000369367 ALDH1A1P00352 501 aa10.71□□□□□ -0.7
SCAF11-202ENST00000369367 DPEP1P16444 411 aa10.71□□□□□ -0.7
SCAF11-202ENST00000369367 PFKFB3Q16875 520 aaPredicted RBP10.71□□□□□ -0.7
SCAF11-202ENST00000369367 CEP95Q96GE4 821 aa10.71□□□□□ -0.7
SCAF11-202ENST00000369367 ELP3Q9H9T3 547 aa10.71□□□□□ -0.7
SCAF11-202ENST00000369367 STXBP3O00186 592 aa10.71□□□□□ -0.7
SCAF11-202ENST00000369367 HOXA13P31271 388 aaPredicted RBP10.71□□□□□ -0.7
SCAF11-202ENST00000369367 GTF2A2P52657 109 aa10.71□□□□□ -0.7
SCAF11-202ENST00000369367 RABL6Q3YEC7 729 aaPredicted RBP10.71□□□□□ -0.7
SCAF11-202ENST00000369367 SPATA24Q86W54 205 aa10.71□□□□□ -0.7
SCAF11-202ENST00000369367 ATRIPQ8WXE1 791 aa10.71□□□□□ -0.7
SCAF11-202ENST00000369367 TIPINQ9BVW5 301 aa10.71□□□□□ -0.7
SCAF11-202ENST00000369367 USP11P51784 963 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 SYT10Q6XYQ8 523 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 INTS8Q75QN2 995 aaKnown RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 GGA3Q9NZ52 723 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 SRPRBQ9Y5M8 271 aaKnown RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 CLDN3O15551 220 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 TRAPPC3O43617 180 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 P4HBP07237 508 aaKnown RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 PPARGP37231 505 aaPredicted RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 KIF23Q02241 960 aaPredicted RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 ZNF658Q5TYW1 1059 aaPredicted RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 SLITRK6Q9H5Y7 841 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 NBPF26B4DH59 902 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 PPP2R5DQ14738 602 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 ZNF667Q5HYK9 610 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 C10orf76Q5T2E6 689 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 NBPF10Q6P3W6 841 aaKnown RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 HDXQ7Z353 690 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 NBPF15Q8N660 670 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 ADARB2Q9NS39 739 aaKnown RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 EMILIN3Q9NT22 766 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 CYP2D7A0A087X1C5 515 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 CTNND1O60716 968 aaKnown RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 EZH2Q15910 746 aaKnown RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 ANGEL2Q5VTE6 544 aaKnown RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 XRRA1Q6P2D8 792 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 CDKL2Q92772 493 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 SPATA33Q96N06 139 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 MTRQ99707 1265 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 MAP3K20Q9NYL2 800 aaKnown RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 ZNF70Q9UC06 446 aaPredicted RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 QARSP47897 775 aaKnown RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 GMPSP49915 693 aaPredicted RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 FCGRTP55899 365 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 POLR2FP61218 127 aaKnown RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 CPLX4Q7Z7G2 160 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 TECPR2O15040 1411 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 HUS1O60921 280 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 MARK3P27448 753 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 HMGCS2P54868 508 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 ZNF445P59923 1031 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 PSMC5P62195 406 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 PALM2Q8IXS6 379 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 CNOT6LQ96LI5 555 aaKnown RBP10.7□□□□□ -0.7
SCAF11-202ENST00000369367 MYOZ2Q9NPC6 264 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 NYAP2Q9P242 653 aa10.7□□□□□ -0.7
SCAF11-202ENST00000369367 I3L4J1 428 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 SCARF1Q14162 830 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 LONRF2Q1L5Z9 754 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 HAUS4Q9H6D7 363 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 KIAA0391O15091 583 aaKnown RBP10.69□□□□□ -0.7
SCAF11-202ENST00000369367 SLC26A4O43511 780 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 AP3M2P53677 418 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 ARPP19P56211 112 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 UBE2SQ16763 222 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 TRMT44Q8IYL2 757 aaKnown RBP10.69□□□□□ -0.7
SCAF11-202ENST00000369367 RASGRP4Q8TDF6 673 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 USP32Q8NFA0 1604 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 EFNA5P52803 228 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 BFSP1Q12934 665 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 VEPH1Q14D04 833 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 KRT222Q8N1A0 295 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 PGBD4Q96DM1 585 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 NUDT12Q9BQG2 462 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 TUBGCP2Q9BSJ2 902 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.69□□□□□ -0.7
SCAF11-202ENST00000369367 CCL15-CCL14A0A0B4J2E2 113 aa10.69□□□□□ -0.7
SCAF11-202ENST00000369367 ZNF189O75820 626 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms