RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 HHIPQ96QV1 700 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 POP1Q99575 1024 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 TRIM55Q9BYV6 548 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 CXorf56Q9H5V9 222 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 SRA1Q9HD15 236 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 NGRNQ9NPE2 291 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 SOX13Q9UN79 622 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 FAM208BQ5VWN6 2430 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 A0A096LPE4 126 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 A0A1W2PPZ6 126 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 FAM170AA1A519 330 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 PPIP5K2O43314 1243 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 HOXB4P17483 251 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 GSTT1P30711 240 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 HOXC9P31274 260 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 CDKN1CP49918 316 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 IRX3P78415 501 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 WASHC5Q12768 1159 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 C9orf50Q5SZB4 431 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 FAM117BQ6P1L5 589 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 SUGP1Q8IWZ8 645 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 SPICE1Q8N0Z3 855 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 IL22RA1Q8N6P7 574 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 GLIS3Q8NEA6 775 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 SKA1Q96BD8 255 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 CRELD1Q96HD1 420 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 ABCB6Q9NP58 842 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 FAM8A1Q9UBU6 413 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 ZNF652Q9Y2D9 606 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 DIS3Q9Y2L1 958 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 SLC45A1Q9Y2W3 748 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 AK5Q9Y6K8 562 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 MAP3K19Q56UN5 1328 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 ASH1LQ9NR48 2969 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 USP9XQ93008 2570 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 KDM3BQ7LBC6 1761 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 PRAMEF22A3QJZ6 481 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 H3BRJ5 948 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 FIBPO43427 364 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 DIAPH1O60610 1272 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 SCGB1D2O95969 90 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 SSBP05455 408 aaKnown RBP eCLIP4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 IFIT2P09913 472 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 ITPKAP23677 461 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 ID4P47928 161 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 PPM1FP49593 454 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 FCGRTP55899 365 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 RAC1P63000 192 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 PDE1CQ14123 709 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 RASA3Q14644 834 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 RPS26P11Q5JNZ5 115 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 IQCEQ6IPM2 695 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 ERAP2Q6P179 960 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 NXPE4Q6UWF7 544 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 LINC00114Q6XXX2 140 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 DTHD1Q6ZMT9 781 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 RELL1Q8IUW5 271 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 MAP4K3Q8IVH8 894 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 DNAJC10Q8IXB1 793 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 IFNL2Q8IZJ0 200 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 DTWD1Q8N5C7 304 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 CNBD1Q8NA66 436 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 PRSS33Q8NF86 280 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 GPRASP2Q96D09 838 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 SEC16BQ96JE7 1060 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 PTPRHQ9HD43 1115 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 TMEM260Q9NX78 707 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 TAGLN3Q9UI15 199 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 ZBTB1Q9Y2K1 713 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 PCDHGB7Q9Y5F8 929 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 COL15A1P39059 1388 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 ROCK1Q13464 1354 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 RAB3GAP2Q9H2M9 1393 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 DMDP11532 3685 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 ARFGEF2Q9Y6D5 1785 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 ESYT3A0FGR9 886 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 METTL12A8MUP2 240 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 PRR33A8MZF0 331 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 H7C1D1 291 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 TFRCP02786 760 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 USP17L7P0C7H9 530 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 CTGFP29279 349 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 COL9A3Q14050 684 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 RAB33AQ14088 237 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 PDE3AQ14432 1141 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 PUM3Q15397 648 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 SHHQ15465 462 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 ZKSCAN8Q15776 578 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 ST3GAL2Q16842 350 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 SPRED3Q2MJR0 410 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 FAM83BQ5T0W9 1011 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 TSHZ3Q63HK5 1081 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 HS2ST1Q7LGA3 356 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 CATIPQ7Z7H3 387 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 C14orf80Q86SX3 495 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 ENAHQ8N8S7 591 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 ZBTB38Q8NAP3 1195 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 TTC8Q8TAM2 541 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 RPGRQ92834 1020 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms