RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 SKA2Q8WVK7 121 aaPredicted RBP11.71□□□□□ -0.53
PTPRK-205ENST00000368213 ZNF668Q96K58 619 aaPredicted RBP11.71□□□□□ -0.53
PTPRK-205ENST00000368213 PCDHA7Q9UN72 937 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 MST1RQ04912 1400 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 CIITAP33076 1130 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 GRM4Q14833 912 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 RPS6KA1Q15418 735 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 TICAM2Q86XR7 235 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 MAP7D3Q8IWC1 876 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 FAM81BQ96LP2 452 aa11.71□□□□□ -0.53
PTPRK-205ENST00000368213 CTSHP09668 335 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 RGS2P41220 211 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 GOLGA8FQ08AF8 430 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 GOLGA8DPQ0D2H9 430 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 RNF219Q5W0B1 726 aaPredicted RBP11.71□□□□□ -0.54
PTPRK-205ENST00000368213 MAP1SQ66K74 1059 aaPredicted RBP11.71□□□□□ -0.54
PTPRK-205ENST00000368213 FAM117BQ6P1L5 589 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 TRIML1Q8N9V2 468 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 BEST2Q8NFU1 509 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 C2orf40Q9H1Z8 148 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 IFT122Q9HBG6 1241 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 AMFRQ9UKV5 643 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 GOLGA8IPA6NC78 632 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 GOLGA8JA6NMD2 632 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 GH1P01241 217 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 ZNF449Q6P9G9 518 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 PARD3BQ8TEW8 1205 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 TRIM31Q9BZY9 425 aa11.71□□□□□ -0.54
PTPRK-205ENST00000368213 NRXN1Q9ULB1 1477 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 RINT1Q6NUQ1 792 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 DAAM2Q86T65 1068 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 IFIH1Q9BYX4 1025 aaKnown RBP11.7□□□□□ -0.54
PTPRK-205ENST00000368213 OPA1O60313 960 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 HUS1O60921 280 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 IFNB1P01574 187 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 ACTN1P12814 892 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 NOP9Q86U38 636 aaKnown RBP11.7□□□□□ -0.54
PTPRK-205ENST00000368213 ENAHQ8N8S7 591 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-205ENST00000368213 KIAA1468Q9P260 1216 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 SLC9A2Q9UBY0 812 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 GADD45BO75293 160 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-205ENST00000368213 CAPN15O75808 1086 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 TSTA3Q13630 321 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-205ENST00000368213 PRPSAP1Q14558 356 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 SCYL3Q8IZE3 742 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 ANKRD13CQ8N6S4 541 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 CCDC68Q9H2F9 335 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 CBX8Q9HC52 389 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 CDC25AP30304 524 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 C12orf60Q5U649 245 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 MTMR6Q9Y217 621 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 GOLGA8SH3BPF8 625 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 PPP6R2O75170 966 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 ALDH1A1P00352 501 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 RHOXF2BP0C7M4 288 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 PPFIA1Q13136 1202 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 BAATQ14032 418 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-205ENST00000368213 MUM1L1Q5H9M0 696 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-205ENST00000368213 NAPGQ99747 312 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-205ENST00000368213 RHOXF2Q9BQY4 288 aa11.7□□□□□ -0.54
PTPRK-205ENST00000368213 AFPP02771 609 aaKnown RBP11.69□□□□□ -0.54
PTPRK-205ENST00000368213 SLC39A14Q15043 492 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 OR6B2Q6IFH4 312 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 SYT10Q6XYQ8 523 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 GLT1D1Q96MS3 346 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 EMILIN3Q9NT22 766 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 CPB1P15086 417 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 PLCG1P19174 1290 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 KIF23Q02241 960 aaPredicted RBP11.69□□□□□ -0.54
PTPRK-205ENST00000368213 PFKFB3Q16875 520 aaPredicted RBP11.69□□□□□ -0.54
PTPRK-205ENST00000368213 PADI6Q6TGC4 694 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 AFAP1L2Q8N4X5 818 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 ZKSCAN4Q969J2 545 aaPredicted RBP11.69□□□□□ -0.54
PTPRK-205ENST00000368213 MKRN1Q9UHC7 482 aaKnown RBP11.69□□□□□ -0.54
PTPRK-205ENST00000368213 RGS12O14924 1447 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 SFI1A8K8P3 1242 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 GSG1L2A8MUP6 293 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 QARSP47897 775 aaKnown RBP11.69□□□□□ -0.54
PTPRK-205ENST00000368213 GNASQ5JWF2 1037 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 EEF2KMTQ96G04 330 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 DYDC2Q96IM9 177 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 CNOT6LQ96LI5 555 aaKnown RBP11.69□□□□□ -0.54
PTPRK-205ENST00000368213 RIC8AQ9NPQ8 531 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 GOLGA8CPA6NN73 597 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 MAN1A1P33908 653 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 ZNF667Q5HYK9 610 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 ERO1BQ86YB8 467 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 FAM20AQ96MK3 541 aa11.69□□□□□ -0.54
PTPRK-205ENST00000368213 IPO5O00410 1097 aaKnown RBP11.68□□□□□ -0.54
PTPRK-205ENST00000368213 GMNNO75496 209 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 GGPS1O95749 300 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 P4HBP07237 508 aaKnown RBP11.68□□□□□ -0.54
PTPRK-205ENST00000368213 MXI1P50539 228 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 NDUFA8P51970 172 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 LGSNQ5TDP6 509 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 C8orf74Q6P047 294 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTPRK-205ENST00000368213 NEK9Q8TD19 979 aa11.68□□□□□ -0.54
PTPRK-205ENST00000368213 VCPKMTQ9H867 229 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms