RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 IMPACTQ9P2X3 320 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 AK9Q5TCS8 1911 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 ARL4AP40617 200 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 MIS12Q9H081 205 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 LMBRD1Q9NUN5 540 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 HOXC10Q9NYD6 342 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 ARHGAP6O43182 974 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 ZMYND10O75800 440 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 CTSHP09668 335 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 P3H4Q92791 437 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 PNMA2Q9UL42 364 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 ERVV-1B6SEH8 477 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 SRGAP2BP0DMP2 458 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 SWSAP1Q6NVH7 229 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 PNMA8AQ86V59 439 aaPredicted RBP21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 PLEKHF1Q96S99 279 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 COPRSQ9NQ92 184 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 TMEM63CQ9P1W3 806 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 PCDHB6Q9Y5E3 794 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 WDR64B1ANS9 1081 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 ARHGEF18Q6ZSZ5 1173 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 CCDC94Q9BW85 323 aaPredicted RBP21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 GTF2A1P52655 376 aaPredicted RBP21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 PRR36Q9H6K5 1346 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 MAP7D3Q8IWC1 876 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 GJB4Q9NTQ9 266 aa21.97■■□□□ 1.11
CDC42BPB-201ENST00000361246 CAPN15O75808 1086 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 FBXW4P57775 412 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 CYP27A1Q02318 531 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 ANGPTL8Q6UXH0 198 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 TMEM179Q6ZVK1 233 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 RPAP3Q9H6T3 665 aaPredicted RBP21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 CPP00450 1065 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 GNAT1P11488 350 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 NEO1Q92859 1461 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 MED7O43513 233 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 GBP1P32455 592 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 RPGRIP1Q96KN7 1286 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 TACO1Q9BSH4 297 aaKnown RBP21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 CD209Q9NNX6 404 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 TSKSQ9UJT2 592 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 CASP14P31944 242 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 MARCH10Q8NA82 808 aaPredicted RBP21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 MTMR6Q9Y217 621 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 TNPO2O14787 897 aaKnown RBP21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 COPB2P35606 906 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 PTPN12Q05209 780 aaKnown RBP21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 CYP4F22Q6NT55 531 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 MICALL2Q8IY33 904 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 TTC25Q96NG3 672 aa21.96■■□□□ 1.11
CDC42BPB-201ENST00000361246 PRPSAP2O60256 369 aa21.95■■□□□ 1.11
CDC42BPB-201ENST00000361246 FCER1AP12319 257 aa21.95■■□□□ 1.11
CDC42BPB-201ENST00000361246 STAT3P40763 770 aa21.95■■□□□ 1.11
CDC42BPB-201ENST00000361246 IRX4P78413 519 aa21.95■■□□□ 1.11
CDC42BPB-201ENST00000361246 ZNF568Q3ZCX4 644 aa21.95■■□□□ 1.11
CDC42BPB-201ENST00000361246 APOBEC3FQ8IUX4 373 aaKnown RBP21.95■■□□□ 1.11
CDC42BPB-201ENST00000361246 TBK1Q9UHD2 729 aa21.95■■□□□ 1.11
CDC42BPB-201ENST00000361246 SESN3P58005 492 aa21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 TTC31Q49AM3 519 aaPredicted RBP21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 POLR3EQ9NVU0 708 aa21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 H2AFZP0C0S5 128 aa21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 RUFY4Q6ZNE9 571 aa21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 H2AFVQ71UI9 128 aa21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 BHMT2Q9H2M3 363 aa21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 SH2B2O14492 632 aaPredicted RBP21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 CREB3O43889 395 aa21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 GAP43P17677 238 aa21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 HMGCS2P54868 508 aa21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 RBM46Q8TBY0 533 aaKnown RBP21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 TUBB4AP04350 444 aa21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 INHBAP08476 426 aa21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 KRT3P12035 628 aa21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 PMLP29590 882 aa21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 MAGOHBQ96A72 148 aaKnown RBP21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 LBHD1Q9BQE6 289 aaPredicted RBP21.95■■□□□ 1.1
CDC42BPB-201ENST00000361246 CDC42BPGQ6DT37 1551 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 CMA1P23946 247 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 RBL2Q08999 1139 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 NME3Q13232 169 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 MTMR2Q13614 643 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 PPP6R3Q5H9R7 873 aaPredicted RBP21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 TRIM58Q8NG06 486 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 ERO1AQ96HE7 468 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 MOCS3O95396 460 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 ELMSAN1Q6PJG2 1045 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 SLC7A5P2Q9GIP4 190 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 ZCCHC11Q5TAX3 1644 aaKnown RBP21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 MCF2LO15068 1137 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 CYP27B1O15528 508 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 FTCDO95954 541 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 GPBP1L1Q9HC44 474 aaPredicted RBP21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 EMILIN3Q9NT22 766 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 RNF146Q9NTX7 359 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 SLC16A4O15374 487 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 SARS2Q9NP81 518 aaKnown RBP21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 NEDD4P46934 1319 aa21.94■■□□□ 1.1
CDC42BPB-201ENST00000361246 WDR91A4D1P6 747 aa21.93■■□□□ 1.1
CDC42BPB-201ENST00000361246 RCN2Q14257 317 aa21.93■■□□□ 1.1
CDC42BPB-201ENST00000361246 CEP120Q8N960 986 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms