RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 KCNA2P16389 499 aa25.9■■□□□ 1.74
SDF4-202ENST00000360001 GNPTABQ3T906 1256 aa25.9■■□□□ 1.74
SDF4-202ENST00000360001 MIER3Q7Z3K6 550 aa25.9■■□□□ 1.74
SDF4-202ENST00000360001 MUTP22033 750 aa25.89■■□□□ 1.74
SDF4-202ENST00000360001 SLC12A3P55017 1021 aa25.89■■□□□ 1.74
SDF4-202ENST00000360001 TPH2Q8IWU9 490 aa25.89■■□□□ 1.74
SDF4-202ENST00000360001 DDX12PQ92771 950 aa25.89■■□□□ 1.74
SDF4-202ENST00000360001 PPP1R3GB7ZBB8 358 aa25.89■■□□□ 1.73
SDF4-202ENST00000360001 SSBP05455 408 aaKnown RBP eCLIP25.89■■□□□ 1.73
SDF4-202ENST00000360001 DYMQ7RTS9 669 aa25.89■■□□□ 1.73
SDF4-202ENST00000360001 NEK9Q8TD19 979 aa25.89■■□□□ 1.73
SDF4-202ENST00000360001 WRAP73Q9P2S5 460 aaPredicted RBP25.89■■□□□ 1.73
SDF4-202ENST00000360001 SMTNL1A8MU46 457 aa25.88■■□□□ 1.73
SDF4-202ENST00000360001 FAM155AB1AL88 458 aaPredicted RBP25.88■■□□□ 1.73
SDF4-202ENST00000360001 CCNE2O96020 404 aa25.88■■□□□ 1.73
SDF4-202ENST00000360001 ICAM3P32942 547 aa25.88■■□□□ 1.73
SDF4-202ENST00000360001 CT47A1Q5JQC4 288 aaPredicted RBP25.88■■□□□ 1.73
SDF4-202ENST00000360001 DNAJC19Q96DA6 116 aa25.88■■□□□ 1.73
SDF4-202ENST00000360001 ZCCHC17Q9NP64 241 aaKnown RBP25.88■■□□□ 1.73
SDF4-202ENST00000360001 GDAQ9Y2T3 454 aa25.88■■□□□ 1.73
SDF4-202ENST00000360001 PLXNB2O15031 1838 aa25.88■■□□□ 1.73
SDF4-202ENST00000360001 KRT76Q01546 638 aa25.87■■□□□ 1.73
SDF4-202ENST00000360001 MYL5Q02045 173 aa25.87■■□□□ 1.73
SDF4-202ENST00000360001 PDE4DQ08499 809 aa25.87■■□□□ 1.73
SDF4-202ENST00000360001 FAM110CQ1W6H9 321 aa25.87■■□□□ 1.73
SDF4-202ENST00000360001 SYT2Q8N9I0 419 aaPredicted RBP25.87■■□□□ 1.73
SDF4-202ENST00000360001 MED15Q96RN5 788 aa25.87■■□□□ 1.73
SDF4-202ENST00000360001 PVALEFA0A1B0GWK0 134 aa25.87■■□□□ 1.73
SDF4-202ENST00000360001 CYP11B2P19099 503 aa25.87■■□□□ 1.73
SDF4-202ENST00000360001 ERCC5P28715 1186 aaPredicted RBP25.87■■□□□ 1.73
SDF4-202ENST00000360001 UNC13DQ70J99 1090 aa25.87■■□□□ 1.73
SDF4-202ENST00000360001 LXNQ9BS40 222 aa25.87■■□□□ 1.73
SDF4-202ENST00000360001 EXOC1Q9NV70 894 aa25.87■■□□□ 1.73
SDF4-202ENST00000360001 NFASCO94856 1347 aa25.87■■□□□ 1.73
SDF4-202ENST00000360001 ADGRA2Q96PE1 1338 aa25.87■■□□□ 1.73
SDF4-202ENST00000360001 EYA4O95677 639 aa25.86■■□□□ 1.73
SDF4-202ENST00000360001 PLCB2Q00722 1185 aa25.86■■□□□ 1.73
SDF4-202ENST00000360001 CCDC173Q0VFZ6 552 aa25.86■■□□□ 1.73
SDF4-202ENST00000360001 ARSHQ5FYA8 562 aa25.86■■□□□ 1.73
SDF4-202ENST00000360001 GPBP1Q86WP2 473 aa25.86■■□□□ 1.73
SDF4-202ENST00000360001 GIMAP8Q8ND71 665 aaPredicted RBP25.86■■□□□ 1.73
SDF4-202ENST00000360001 BANK1Q8NDB2 785 aa25.86■■□□□ 1.73
SDF4-202ENST00000360001 CCDC47Q96A33 483 aaKnown RBP25.86■■□□□ 1.73
SDF4-202ENST00000360001 PDLIM2Q96JY6 352 aa25.86■■□□□ 1.73
SDF4-202ENST00000360001 PPP1R9BQ96SB3 815 aa25.86■■□□□ 1.73
SDF4-202ENST00000360001 BCAS3Q9H6U6 928 aa25.86■■□□□ 1.73
SDF4-202ENST00000360001 ABT1Q9ULW3 272 aaKnown RBP25.86■■□□□ 1.73
SDF4-202ENST00000360001 DOCK5Q9H7D0 1870 aa25.86■■□□□ 1.73
SDF4-202ENST00000360001 B4DLN1 442 aa25.86■■□□□ 1.73
SDF4-202ENST00000360001 ZNF746Q6NUN9 644 aaPredicted RBP25.86■■□□□ 1.73
SDF4-202ENST00000360001 SENP7Q9BQF6 1050 aa25.86■■□□□ 1.73
SDF4-202ENST00000360001 HSD3B7Q9H2F3 369 aa25.86■■□□□ 1.73
SDF4-202ENST00000360001 WDR64B1ANS9 1081 aa25.85■■□□□ 1.73
SDF4-202ENST00000360001 P4HBP07237 508 aaKnown RBP25.85■■□□□ 1.73
SDF4-202ENST00000360001 JAK3P52333 1124 aa25.85■■□□□ 1.73
SDF4-202ENST00000360001 ABRAQ8N0Z2 381 aa25.85■■□□□ 1.73
SDF4-202ENST00000360001 ENOX1Q8TC92 643 aaKnown RBP25.85■■□□□ 1.73
SDF4-202ENST00000360001 PIGOQ8TEQ8 1089 aa25.85■■□□□ 1.73
SDF4-202ENST00000360001 CCDC102AQ96A19 550 aa25.85■■□□□ 1.73
SDF4-202ENST00000360001 BHMT2Q9H2M3 363 aa25.85■■□□□ 1.73
SDF4-202ENST00000360001 BMP2KQ9NSY1 1161 aaPredicted RBP25.85■■□□□ 1.73
SDF4-202ENST00000360001 SAMM50Q9Y512 469 aa25.85■■□□□ 1.73
SDF4-202ENST00000360001 TMEM88BA6NKF7 163 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 ADCY5O95622 1261 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 SFNP31947 248 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 SP2Q02086 613 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 KLHL10Q6JEL2 608 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 SEPT14Q6ZU15 432 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 MPHOSPH6Q99547 160 aaKnown RBP25.84■■□□□ 1.73
SDF4-202ENST00000360001 TCEAL9Q9UHQ7 104 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 ZBTB39O15060 712 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 PRCPP42785 496 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 INHBEP58166 350 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 EHHADHQ08426 723 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 IFNL1Q8IU54 200 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 TRMT44Q8IYL2 757 aaKnown RBP25.84■■□□□ 1.73
SDF4-202ENST00000360001 RDM1Q8NG50 284 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 MORC4Q8TE76 937 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 NACC1Q96RE7 527 aa25.84■■□□□ 1.73
SDF4-202ENST00000360001 PLXNA1Q9UIW2 1896 aa25.83■■□□□ 1.73
SDF4-202ENST00000360001 LOC102724159A0A0B4J2E5 919 aa25.83■■□□□ 1.73
SDF4-202ENST00000360001 NPHP3-ACAD11A0A0J9YXS1 232 aa25.83■■□□□ 1.73
SDF4-202ENST00000360001 STRNO43815 780 aa25.83■■□□□ 1.73
SDF4-202ENST00000360001 TOMM70O94826 608 aa25.83■■□□□ 1.73
SDF4-202ENST00000360001 IDEP14735 1019 aa25.83■■□□□ 1.73
SDF4-202ENST00000360001 ADORA2AP29274 412 aa25.83■■□□□ 1.73
SDF4-202ENST00000360001 STK4Q13043 487 aa25.83■■□□□ 1.73
SDF4-202ENST00000360001 PWP2Q15269 919 aaKnown RBP25.83■■□□□ 1.73
SDF4-202ENST00000360001 ADSSL1Q8N142 457 aa25.83■■□□□ 1.73
SDF4-202ENST00000360001 HHIPL1Q96JK4 782 aa25.83■■□□□ 1.73
SDF4-202ENST00000360001 JPH1Q9HDC5 661 aaPredicted RBP25.83■■□□□ 1.73
SDF4-202ENST00000360001 MCM3APO60318 1980 aa25.83■■□□□ 1.72
SDF4-202ENST00000360001 QARSP47897 775 aaKnown RBP25.82■■□□□ 1.72
SDF4-202ENST00000360001 TAF1CQ15572 869 aaPredicted RBP25.82■■□□□ 1.72
SDF4-202ENST00000360001 SARM1Q6SZW1 724 aa25.82■■□□□ 1.72
SDF4-202ENST00000360001 HPS3Q969F9 1004 aa25.82■■□□□ 1.72
SDF4-202ENST00000360001 GTPBP4Q9BZE4 634 aaKnown RBP25.82■■□□□ 1.72
SDF4-202ENST00000360001 ZSWIM4Q9H7M6 989 aa25.82■■□□□ 1.72
SDF4-202ENST00000360001 CPA4Q9UI42 421 aa25.82■■□□□ 1.72
SDF4-202ENST00000360001 COBLO75128 1261 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms