RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 EPM2AIP1Q7L775 607 aaPredicted RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 REXO1L1PQ8IX06 675 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 CALML6Q8TD86 181 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 PPWD1Q96BP3 646 aaKnown RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 FUCA2Q9BTY2 467 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 ANKZF1Q9H8Y5 726 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 OLFML3Q9NRN5 406 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 SNX12Q9UMY4 172 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 FOXP2O15409 715 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 CYTH3O43739 400 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 CHN1P15882 459 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 TFAP4Q01664 338 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 STX3Q13277 289 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 NOSTRINQ8IVI9 506 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 FAM133AQ8N9E0 248 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 STKLD1Q8NE28 680 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 SMCR8Q8TEV9 937 aaPredicted RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 TUBGCP2Q9BSJ2 902 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 PAG1Q9NWQ8 432 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 CCPG1Q9ULG6 757 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 POLR2EP19388 210 aaKnown RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 GNAQP50148 359 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 CBX3Q13185 183 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 SHROOM2Q13796 1616 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 GSTA3Q16772 222 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 KRT40Q6A162 431 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 ITIH6Q6UXX5 1313 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 FMR1NBQ8N0W7 255 aaPredicted RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 CCDC89Q8N998 374 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 ZFAND2BQ8WV99 257 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 CAVIN3Q969G5 261 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 MAK16Q9BXY0 300 aaKnown RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 SUGCTQ9HAC7 445 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 SENP1Q9P0U3 644 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 DNMT1P26358 1616 aaKnown RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 GOLGA8CPA6NN73 597 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 TCP11X1B4DZS4 312 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 MOCS3O95396 460 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 KRT6AP02538 564 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 KRT6BP04259 564 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 UBTFL6P0CB48 400 aaPredicted RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 PCNX4Q63HM2 1172 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 TMC5Q6UXY8 1006 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 ESR2Q92731 530 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 FAM161BQ96MY7 647 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 NDNQ99608 321 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 SYBUQ9NX95 663 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 CAPN1P07384 714 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 EEF1B2P24534 225 aaKnown RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 PMS2P54278 862 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 B3GNT6Q6ZMB0 384 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 PGBD1Q96JS3 809 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 THAP9Q9H5L6 903 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 CABP1Q9NZU7 370 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 CLIC4Q9Y696 253 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 SMIM31A0A1B0GVY4 71 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 KPNA4O00629 521 aaPredicted RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 NPTXRO95502 500 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 OATP04181 439 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 PGM1P36871 562 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 KIF11P52732 1056 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 RBM43Q6ZSC3 357 aaKnown RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 UBE2Q1Q7Z7E8 422 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 SKA1Q96BD8 255 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 DHTKD1Q96HY7 919 aaPredicted RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 DSCC1Q9BVC3 393 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 NCOA5Q9HCD5 579 aaKnown RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 ARHGEF5Q12774 1597 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 POTEB3A0JP26 581 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 RNF113AO15541 343 aaKnown RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 XPOTO43592 962 aaKnown RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 ST13P50502 369 aaKnown RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 POTEBQ6S5H4 581 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 CDK19Q9BWU1 502 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 IFT122Q9HBG6 1241 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 RXFP1Q9HBX9 757 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 CD209Q9NNX6 404 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 RABGEF1Q9UJ41 708 aa5.42□□□□□ -1.54
SKP1-202ENST00000353411 CAB39Q9Y376 341 aaPredicted RBP5.42□□□□□ -1.54
SKP1-202ENST00000353411 CLPTM1O96005 669 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 PYGBP11216 843 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 ATP6V1C1P21283 382 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 MAP4P27816 1152 aaKnown RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 BLMHQ13867 455 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 RGS9BPQ6ZS82 235 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 ASCC2Q9H1I8 757 aaPredicted RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 KLHL42Q9P2K6 505 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 TRPC5Q9UL62 973 aaPredicted RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 ZMYND8Q9ULU4 1186 aaPredicted RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 GMEB1Q9Y692 573 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 ADGRL3Q9HAR2 1447 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 ADCY9O60503 1353 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 H0YC42 278 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 GOLGA8TH3BQL2 631 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 GOLGA8HP0CJ92 632 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 ITGB3BPQ13352 177 aaPredicted RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 TCP11X2Q5H9J9 407 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 DIS3L2Q8IYB7 885 aaKnown RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 CRACR2BQ8N4Y2 399 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms