RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 TTI1O43156 1089 aa19.5■□□□□ 0.71
APP-202ENST00000348990 NEBLO76041 1014 aa19.5■□□□□ 0.71
APP-202ENST00000348990 KIF4AO95239 1232 aa19.5■□□□□ 0.71
APP-202ENST00000348990 HIBADHP31937 336 aaKnown RBP19.5■□□□□ 0.71
APP-202ENST00000348990 UBE4AQ14139 1066 aa19.5■□□□□ 0.71
APP-202ENST00000348990 ASTE1Q2TB18 679 aaPredicted RBP19.5■□□□□ 0.71
APP-202ENST00000348990 MAPKAPK5Q8IW41 473 aa19.5■□□□□ 0.71
APP-202ENST00000348990 CNOT8Q9UFF9 292 aaKnown RBP19.5■□□□□ 0.71
APP-202ENST00000348990 TPX2Q9ULW0 747 aaKnown RBP19.5■□□□□ 0.71
APP-202ENST00000348990 HGSO14964 777 aaPredicted RBP19.5■□□□□ 0.71
APP-202ENST00000348990 VIMP08670 466 aaKnown RBP19.5■□□□□ 0.71
APP-202ENST00000348990 SCTRP47872 440 aa19.5■□□□□ 0.71
APP-202ENST00000348990 CUL1Q13616 776 aa19.5■□□□□ 0.71
APP-202ENST00000348990 COA7Q96BR5 231 aa19.5■□□□□ 0.71
APP-202ENST00000348990 SGSM3Q96HU1 749 aa19.5■□□□□ 0.71
APP-202ENST00000348990 NEUROG2Q9H2A3 272 aa19.5■□□□□ 0.71
APP-202ENST00000348990 SLC35G1Q2M3R5 365 aa19.49■□□□□ 0.71
APP-202ENST00000348990 RPAINQ86UA6 219 aa19.49■□□□□ 0.71
APP-202ENST00000348990 CCDC26Q8TAB7 109 aa19.49■□□□□ 0.71
APP-202ENST00000348990 UTP11Q9Y3A2 253 aaKnown RBP19.49■□□□□ 0.71
APP-202ENST00000348990 NOC2LQ9Y3T9 749 aaKnown RBP19.49■□□□□ 0.71
APP-202ENST00000348990 PVALEFA0A1B0GWK0 134 aa19.49■□□□□ 0.71
APP-202ENST00000348990 TRAPPC3O43617 180 aa19.49■□□□□ 0.71
APP-202ENST00000348990 RASSF9O75901 435 aa19.49■□□□□ 0.71
APP-202ENST00000348990 IFNAR2P48551 515 aa19.49■□□□□ 0.71
APP-202ENST00000348990 ADAM9Q13443 819 aa19.49■□□□□ 0.71
APP-202ENST00000348990 ANKRD20A8PQ5CZ79 823 aa19.49■□□□□ 0.71
APP-202ENST00000348990 LRRC55Q6ZSA7 311 aa19.49■□□□□ 0.71
APP-202ENST00000348990 KCNK18Q7Z418 384 aa19.49■□□□□ 0.71
APP-202ENST00000348990 SEMA3FQ13275 785 aa19.49■□□□□ 0.71
APP-202ENST00000348990 UAP1Q16222 522 aaPredicted RBP19.49■□□□□ 0.71
APP-202ENST00000348990 IFI16Q16666 785 aaKnown RBP19.49■□□□□ 0.71
APP-202ENST00000348990 FAM133BQ5BKY9 247 aaKnown RBP19.49■□□□□ 0.71
APP-202ENST00000348990 MINPP1Q9UNW1 487 aa19.49■□□□□ 0.71
APP-202ENST00000348990 FGRP09769 529 aa19.48■□□□□ 0.71
APP-202ENST00000348990 PTK2Q05397 1052 aa19.48■□□□□ 0.71
APP-202ENST00000348990 BIRC3Q13489 604 aa19.48■□□□□ 0.71
APP-202ENST00000348990 PREPLQ4J6C6 727 aaPredicted RBP19.48■□□□□ 0.71
APP-202ENST00000348990 PARP10Q53GL7 1025 aa19.48■□□□□ 0.71
APP-202ENST00000348990 RIC8AQ9NPQ8 531 aa19.48■□□□□ 0.71
APP-202ENST00000348990 PNMA2Q9UL42 364 aa19.48■□□□□ 0.71
APP-202ENST00000348990 FRMPD2Q68DX3 1309 aaPredicted RBP19.48■□□□□ 0.71
APP-202ENST00000348990 BUB1BO60566 1050 aaPredicted RBP19.48■□□□□ 0.71
APP-202ENST00000348990 MTMR3Q13615 1198 aa19.48■□□□□ 0.71
APP-202ENST00000348990 ALKBH5Q6P6C2 394 aaKnown RBP19.48■□□□□ 0.71
APP-202ENST00000348990 ANKS4BQ8N8V4 417 aa19.48■□□□□ 0.71
APP-202ENST00000348990 CELF1Q92879 486 aaKnown RBP19.48■□□□□ 0.71
APP-202ENST00000348990 TRIM51Q9BSJ1 452 aa19.48■□□□□ 0.71
APP-202ENST00000348990 ATXN2Q99700 1313 aaKnown RBP19.48■□□□□ 0.71
APP-202ENST00000348990 COPB2P35606 906 aa19.47■□□□□ 0.71
APP-202ENST00000348990 EIF6P56537 245 aaKnown RBP19.47■□□□□ 0.71
APP-202ENST00000348990 COASYQ13057 564 aa19.47■□□□□ 0.71
APP-202ENST00000348990 DIXDC1Q155Q3 683 aa19.47■□□□□ 0.71
APP-202ENST00000348990 ERFEQ4G0M1 354 aa19.47■□□□□ 0.71
APP-202ENST00000348990 TBC1D1Q86TI0 1168 aaPredicted RBP19.47■□□□□ 0.71
APP-202ENST00000348990 METTL13Q8N6R0 699 aa19.47■□□□□ 0.71
APP-202ENST00000348990 RAD54LQ92698 747 aa19.47■□□□□ 0.71
APP-202ENST00000348990 PNMA5Q96PV4 448 aa19.47■□□□□ 0.71
APP-202ENST00000348990 SLC24A3Q9HC58 644 aa19.47■□□□□ 0.71
APP-202ENST00000348990 STK17AQ9UEE5 414 aa19.47■□□□□ 0.71
APP-202ENST00000348990 GGT7Q9UJ14 662 aa19.47■□□□□ 0.71
APP-202ENST00000348990 NPHP3-ACAD11A0A0J9YXS1 232 aa19.47■□□□□ 0.71
APP-202ENST00000348990 LRIG3Q6UXM1 1119 aa19.47■□□□□ 0.71
APP-202ENST00000348990 CCDC50Q8IVM0 306 aa19.47■□□□□ 0.71
APP-202ENST00000348990 CCDC87Q9NVE4 849 aa19.47■□□□□ 0.71
APP-202ENST00000348990 GLI3P10071 1580 aa19.47■□□□□ 0.71
APP-202ENST00000348990 M0R2N6 131 aa19.47■□□□□ 0.71
APP-202ENST00000348990 SLC37A4O43826 429 aa19.47■□□□□ 0.71
APP-202ENST00000348990 NOL4O94818 638 aa19.47■□□□□ 0.71
APP-202ENST00000348990 DRP2Q13474 957 aa19.47■□□□□ 0.71
APP-202ENST00000348990 PPP2R5AQ15172 486 aa19.47■□□□□ 0.71
APP-202ENST00000348990 C3orf67Q6ZVT6 689 aa19.47■□□□□ 0.71
APP-202ENST00000348990 U2AF1L4Q8WU68 220 aaKnown RBP19.47■□□□□ 0.71
APP-202ENST00000348990 PSMD1Q99460 953 aa19.47■□□□□ 0.71
APP-202ENST00000348990 BTG4Q9NY30 223 aa19.47■□□□□ 0.71
APP-202ENST00000348990 PCDHGC5Q9Y5F6 944 aa19.47■□□□□ 0.71
APP-202ENST00000348990 TNS2Q63HR2 1409 aa19.47■□□□□ 0.71
APP-202ENST00000348990 ABCB4P21439 1286 aa19.46■□□□□ 0.71
APP-202ENST00000348990 CRKLP46109 303 aaKnown RBP19.46■□□□□ 0.71
APP-202ENST00000348990 PLCB4Q15147 1175 aa19.46■□□□□ 0.71
APP-202ENST00000348990 CCDC197Q8NCU1 140 aa19.46■□□□□ 0.71
APP-202ENST00000348990 PBKQ96KB5 322 aa19.46■□□□□ 0.71
APP-202ENST00000348990 EDEM3Q9BZQ6 932 aa19.46■□□□□ 0.71
APP-202ENST00000348990 ZMYND12Q9H0C1 365 aa19.46■□□□□ 0.71
APP-202ENST00000348990 A0A1B0GUA9 196 aa19.46■□□□□ 0.71
APP-202ENST00000348990 MYCNP04198 464 aaPredicted RBP19.46■□□□□ 0.71
APP-202ENST00000348990 KRT13P13646 458 aa19.46■□□□□ 0.71
APP-202ENST00000348990 SLC9A1P19634 815 aa19.46■□□□□ 0.71
APP-202ENST00000348990 SLCO1A2P46721 670 aa19.46■□□□□ 0.71
APP-202ENST00000348990 KCNH2Q12809 1159 aa19.46■□□□□ 0.71
APP-202ENST00000348990 VPS36Q86VN1 386 aa19.46■□□□□ 0.71
APP-202ENST00000348990 DYDC1Q8WWB3 177 aa19.46■□□□□ 0.71
APP-202ENST00000348990 SWAP70Q9UH65 585 aa19.46■□□□□ 0.71
APP-202ENST00000348990 MCM8Q9UJA3 840 aa19.46■□□□□ 0.71
APP-202ENST00000348990 C6orf89Q6UWU4 347 aa19.46■□□□□ 0.71
APP-202ENST00000348990 SH3RF3Q8TEJ3 882 aaPredicted RBP19.46■□□□□ 0.71
APP-202ENST00000348990 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.46■□□□□ 0.71
APP-202ENST00000348990 LRRC27Q9C0I9 530 aa19.46■□□□□ 0.71
APP-202ENST00000348990 CETN3O15182 167 aa19.45■□□□□ 0.7
APP-202ENST00000348990 FGGP02679 453 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms