RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 PXMP2Q9NR77 195 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 PKD2L1Q9P0L9 805 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 TBC1D7Q9P0N9 293 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 ZNF214Q9UL59 606 aaPredicted RBP13.84□□□□□ -0.19
ZNF548-201ENST00000336128 CSADQ9Y600 493 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 MYPNQ86TC9 1320 aa13.83□□□□□ -0.19
ZNF548-201ENST00000336128 SLITRK3O94933 977 aa13.83□□□□□ -0.2
ZNF548-201ENST00000336128 LRRC63Q05C16 580 aa13.83□□□□□ -0.2
ZNF548-201ENST00000336128 RBL2Q08999 1139 aa13.83□□□□□ -0.2
ZNF548-201ENST00000336128 BAATQ14032 418 aaPredicted RBP13.83□□□□□ -0.2
ZNF548-201ENST00000336128 HERC4Q5GLZ8 1057 aaPredicted RBP13.83□□□□□ -0.2
ZNF548-201ENST00000336128 L3MBTL3Q96JM7 780 aaPredicted RBP13.83□□□□□ -0.2
ZNF548-201ENST00000336128 RMDN3Q96TC7 470 aa13.83□□□□□ -0.2
ZNF548-201ENST00000336128 TSG101Q99816 390 aa13.83□□□□□ -0.2
ZNF548-201ENST00000336128 REEP2Q9BRK0 252 aa13.83□□□□□ -0.2
ZNF548-201ENST00000336128 PDCD2LQ9BRP1 358 aa13.83□□□□□ -0.2
ZNF548-201ENST00000336128 ZHX3Q9H4I2 956 aa13.83□□□□□ -0.2
ZNF548-201ENST00000336128 KCNH7Q9NS40 1196 aa13.83□□□□□ -0.2
ZNF548-201ENST00000336128 SPDYE16A6NNV3 312 aaPredicted RBP13.82□□□□□ -0.2
ZNF548-201ENST00000336128 DDX39AO00148 427 aaKnown RBP13.82□□□□□ -0.2
ZNF548-201ENST00000336128 ATP2A1O14983 1001 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 PPP1R12BO60237 982 aaPredicted RBP13.82□□□□□ -0.2
ZNF548-201ENST00000336128 MUTP22033 750 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 UBXN1Q04323 297 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 CEP135Q66GS9 1140 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 E4F1Q66K89 784 aaPredicted RBP13.82□□□□□ -0.2
ZNF548-201ENST00000336128 FOXR2Q6PJQ5 311 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 MB21D1Q8N884 522 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 CNKSR2Q8WXI2 1034 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 C16orf45Q96MC5 204 aaPredicted RBP13.82□□□□□ -0.2
ZNF548-201ENST00000336128 PURBQ96QR8 312 aaKnown RBP13.82□□□□□ -0.2
ZNF548-201ENST00000336128 BAG1Q99933 345 aaPredicted RBP13.82□□□□□ -0.2
ZNF548-201ENST00000336128 RUSC1Q9BVN2 902 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 TRMT1Q9NXH9 659 aaKnown RBP13.82□□□□□ -0.2
ZNF548-201ENST00000336128 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.82□□□□□ -0.2
ZNF548-201ENST00000336128 MFAP3LO75121 409 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 FGFR1OPO95684 399 aaKnown RBP13.82□□□□□ -0.2
ZNF548-201ENST00000336128 TPM2P07951 284 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 MYCLP12524 364 aaPredicted RBP13.82□□□□□ -0.2
ZNF548-201ENST00000336128 MTIF2P46199 727 aaKnown RBP13.82□□□□□ -0.2
ZNF548-201ENST00000336128 IREB2P48200 963 aaKnown RBP13.82□□□□□ -0.2
ZNF548-201ENST00000336128 ARHGEF16Q5VV41 709 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 DPY19L2Q6NUT2 758 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 USP50Q70EL3 339 aaPredicted RBP13.82□□□□□ -0.2
ZNF548-201ENST00000336128 NEK9Q8TD19 979 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 PIGOQ8TEQ8 1089 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 CPLX3Q8WVH0 158 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 CDCA5Q96FF9 252 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 EEF2KMTQ96G04 330 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 PANX2Q96RD6 677 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 TUBGCP2Q9BSJ2 902 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 TEX13BQ9BXU2 312 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 HOXC10Q9NYD6 342 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 LOC285556D6RIA3 1793 aa13.82□□□□□ -0.2
ZNF548-201ENST00000336128 PTPRFP10586 1907 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 B4DLN1 442 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 DHX15O43143 795 aaKnown RBP13.81□□□□□ -0.2
ZNF548-201ENST00000336128 GYPCP04921 128 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 PRKCSHP14314 528 aaPredicted RBP13.81□□□□□ -0.2
ZNF548-201ENST00000336128 ITGB3BPQ13352 177 aaPredicted RBP13.81□□□□□ -0.2
ZNF548-201ENST00000336128 MTMR1Q13613 665 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 TRIM14Q14142 442 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 LRRC55Q6ZSA7 311 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 MIER3Q7Z3K6 550 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 SFR1Q86XK3 245 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 ZNF507Q8TCN5 953 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 ELP3Q9H9T3 547 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 A0A1W2PQC6 194 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 PES1O00541 588 aaKnown RBP13.81□□□□□ -0.2
ZNF548-201ENST00000336128 ARHGAP6O43182 974 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 TPM1P09493 284 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 EPHX2P34913 555 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 ZCWPW2Q504Y3 356 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 TREML2Q5T2D2 321 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 RINT1Q6NUQ1 792 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 NELFCDQ8IXH7 590 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 SCFD1Q8WVM8 642 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 ACAD9Q9H845 621 aa13.81□□□□□ -0.2
ZNF548-201ENST00000336128 WRAP73Q9P2S5 460 aaPredicted RBP13.81□□□□□ -0.2
ZNF548-201ENST00000336128 A0A0G2JMZ2 1700 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 RSPH10B2B2RC85 870 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 STX10O60499 249 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 TBCAO75347 108 aaKnown RBP13.8□□□□□ -0.2
ZNF548-201ENST00000336128 KIF20AO95235 890 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 RSPH10BP0C881 870 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 TNNT1P13805 278 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 CCND2P30279 289 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 CASP14P31944 242 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 DNM2P50570 870 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 FXR1P51114 621 aaKnown RBP eCLIP13.8□□□□□ -0.2
ZNF548-201ENST00000336128 PLS1Q14651 629 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 XRRA1Q6P2D8 792 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 NYAP1Q6ZVC0 841 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 BANK1Q8NDB2 785 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 PPP1R13BQ96KQ4 1090 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 NACC1Q96RE7 527 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 LXNQ9BS40 222 aa13.8□□□□□ -0.2
ZNF548-201ENST00000336128 ZBTB39O15060 712 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 NF2P35240 595 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 MIIPQ5JXC2 388 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms