RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 TPH2Q8IWU9 490 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 SYT2Q8N9I0 419 aaPredicted RBP8.39□□□□□ -1.07
IFT88-201ENST00000319980 RETREG2Q8NC44 543 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 PIGOQ8TEQ8 1089 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 SCFD1Q8WVM8 642 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 ERGIC2Q96RQ1 377 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 TANGO6Q9C0B7 1094 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 TTYH3Q9C0H2 523 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 EMILIN3Q9NT22 766 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 SLC26A4O43511 780 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 GMPSP49915 693 aaPredicted RBP8.39□□□□□ -1.07
IFT88-201ENST00000319980 ZNF280AP59817 542 aaPredicted RBP8.39□□□□□ -1.07
IFT88-201ENST00000319980 RASSF7Q02833 373 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 GIT2Q14161 759 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 CTTNQ14247 550 aaKnown RBP8.39□□□□□ -1.07
IFT88-201ENST00000319980 MAN2A1Q16706 1144 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 ZCWPW2Q504Y3 356 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 PRPF38AQ8NAV1 312 aaKnown RBP8.39□□□□□ -1.07
IFT88-201ENST00000319980 REEP2Q9BRK0 252 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 DEFB129Q9H1M3 183 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 MMRN2Q9H8L6 949 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 CNOT7Q9UIV1 285 aaKnown RBP8.39□□□□□ -1.07
IFT88-201ENST00000319980 PITPNM2Q9BZ72 1349 aa8.39□□□□□ -1.07
IFT88-201ENST00000319980 PSMD10O75832 226 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 CASP5P51878 434 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 ZNF569Q5MCW4 686 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 CCDC155Q8N6L0 562 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 MNS1Q8NEH6 495 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 ZNF397Q8NF99 534 aaPredicted RBP8.38□□□□□ -1.07
IFT88-201ENST00000319980 CARD6Q9BX69 1037 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 HOMER2Q9NSB8 354 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 ZNHIT6Q9NWK9 470 aaKnown RBP8.38□□□□□ -1.07
IFT88-201ENST00000319980 HACL1Q9UJ83 578 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 RABGAP1Q9Y3P9 1069 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 STK24Q9Y6E0 443 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 NFIBO00712 420 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 ZBTB39O15060 712 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 GAS7O60861 476 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 KIF20AO95235 890 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 ICAM1P05362 532 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 ARP10275 920 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 RPS12P25398 132 aaKnown RBP8.38□□□□□ -1.07
IFT88-201ENST00000319980 HOXA7P31268 230 aaPredicted RBP8.38□□□□□ -1.07
IFT88-201ENST00000319980 ZBED6P86452 979 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 CCDC40Q4G0X9 1142 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 NBPF12Q5TAG4 269 aaPredicted RBP8.38□□□□□ -1.07
IFT88-201ENST00000319980 PRAMEF18Q5VWM3 479 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 HOOK2Q96ED9 719 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 HSD17B14Q9BPX1 270 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 ZNF577Q9BSK1 485 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 POLR3CQ9BUI4 534 aaPredicted RBP8.38□□□□□ -1.07
IFT88-201ENST00000319980 EHMT1Q9H9B1 1298 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 COL4A3BPQ9Y5P4 624 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 ZNF536O15090 1300 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 ABCB11O95342 1321 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 FRMD3A2A2Y4 597 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 SFI1A8K8P3 1242 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 RSPH10B2B2RC85 870 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 EPHB6O15197 1021 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 FLOT1O75955 427 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 SLITRK3O94933 977 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 RSPH10BP0C881 870 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 ALAS1P13196 640 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 MAP3K9P80192 1104 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 SFR1Q86XK3 245 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 TEX2Q8IWB9 1127 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 LPAR1Q92633 364 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 DYDC2Q96IM9 177 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 KCTD10Q9H3F6 313 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 BCAS3Q9H6U6 928 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 RAVER2Q9HCJ3 691 aaKnown RBP8.38□□□□□ -1.07
IFT88-201ENST00000319980 PKD2L1Q9P0L9 805 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 SMCHD1A6NHR9 2005 aa8.38□□□□□ -1.07
IFT88-201ENST00000319980 IPO5O00410 1097 aaKnown RBP8.37□□□□□ -1.07
IFT88-201ENST00000319980 WDR46O15213 610 aaKnown RBP8.37□□□□□ -1.07
IFT88-201ENST00000319980 CTNND1O60716 968 aaKnown RBP8.37□□□□□ -1.07
IFT88-201ENST00000319980 ADAM9Q13443 819 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 MTMR2Q13614 643 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 MEA1Q16626 185 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 SMCR8Q8TEV9 937 aaPredicted RBP8.37□□□□□ -1.07
IFT88-201ENST00000319980 UBXN4Q92575 508 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 SLC5A5Q92911 643 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 RUSC1Q9BVN2 902 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 KIAA1683Q9H0B3 1180 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 NHEJ1Q9H9Q4 299 aaPredicted RBP8.37□□□□□ -1.07
IFT88-201ENST00000319980 COL20A1Q9P218 1284 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 GUCA1BQ9UMX6 200 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 FZD1Q9UP38 647 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 TFR2Q9UP52 801 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 SIK3Q9Y2K2 1263 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 REXO2Q9Y3B8 237 aaKnown RBP8.37□□□□□ -1.07
IFT88-201ENST00000319980 DDX39AO00148 427 aaKnown RBP8.37□□□□□ -1.07
IFT88-201ENST00000319980 EYA4O95677 639 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 ARHGAP25P42331 645 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 PRELPP51888 382 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 SPP2Q13103 211 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 PPP2R5CQ13362 524 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 FIGNQ5HY92 759 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 FOXR2Q6PJQ5 311 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 GPIHBP1Q8IV16 184 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms