RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 ATP8B3O60423 1300 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 YWHAGP61981 247 aaKnown RBP eCLIP12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 STXBP2Q15833 593 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 TTBK2Q6IQ55 1244 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 PPP1R18Q6NYC8 613 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 NDST4Q9H3R1 872 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 UBE2TQ9NPD8 197 aaPredicted RBP12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 MROH7-TTC4A0A0A0MT08 1334 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 PHLPP2Q6ZVD8 1323 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 CYP2D6P10635 497 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 PCK1P35558 622 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 LMNTD2Q8IXW0 634 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 MXD3Q9BW11 206 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 BCL2L12Q9HB09 334 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 TBC1D22BQ9NU19 505 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 DAAM1Q9Y4D1 1078 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 SNAP23O00161 211 aa12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 PGRMC1O00264 195 aaKnown RBP12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 XPAP23025 273 aaPredicted RBP12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 TSNAXIP1Q2TAA8 658 aa12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 RCSD1Q6JBY9 416 aa12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 CAPN12Q6ZSI9 719 aa12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 FAM20AQ96MK3 541 aa12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 RAB3IPQ96QF0 476 aaPredicted RBP12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 WRNIP1Q96S55 665 aa12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 MED4Q9NPJ6 270 aa12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 PCDHA6Q9UN73 950 aa12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 PCDHA8Q9Y5H6 950 aa12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 GFPT2O94808 682 aa12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 FDX1P10109 184 aa12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 DDIT3P35638 169 aa12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 CTTNQ14247 550 aaKnown RBP12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 SMAP1Q8IYB5 467 aaPredicted RBP12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 ZHX2Q9Y6X8 837 aa12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 USP31Q70CQ4 1352 aa12.96□□□□□ -0.33
AMBRA1-201ENST00000314845 GSTA1P08263 222 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 GSTA2P09210 222 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 SRGAP2CP0DJJ0 459 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 ORC2Q13416 577 aaPredicted RBP12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 MAP3K21Q5TCX8 1036 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 TBC1D10CQ8IV04 446 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.96□□□□□ -0.345e-10■□□□□ 9.2
AMBRA1-201ENST00000314845 FAM71BQ8TC56 605 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 MSTO1Q9BUK6 570 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 CPSF3Q9UKF6 684 aaKnown RBP12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 ESYT2A0FGR8 921 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 WDR64B1ANS9 1081 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 FAM83BQ5T0W9 1011 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 ZBTB33Q86T24 672 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 APOBEC3FQ8IUX4 373 aaKnown RBP12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 FAM133AQ8N9E0 248 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 NSUN6Q8TEA1 469 aaKnown RBP12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 SCYL1Q96KG9 808 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 NLRP4Q96MN2 994 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 ANAPC5Q9UJX4 755 aa12.96□□□□□ -0.34
AMBRA1-201ENST00000314845 USP17L10C9JJH3 530 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 SGK1O00141 431 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 MCF2LO15068 1137 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 INHBAP08476 426 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 PDE1BQ01064 536 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 KRT76Q01546 638 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 MTMR1Q13613 665 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 TXNRD1Q16881 649 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 CATSPER4Q7RTX7 472 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 NEK9Q8TD19 979 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 GJD4Q96KN9 370 aaPredicted RBP12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 SAMSN1Q9NSI8 373 aaKnown RBP12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 CPDO75976 1380 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 SERPING1P05155 500 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 C4orf50Q6ZRC1 276 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 UNC13DQ70J99 1090 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 SIX6OS1Q8N1H7 587 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 ZNF526Q8TF50 670 aaPredicted RBP12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 PEX3P56589 373 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 PPARDQ03181 441 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 SGO2Q562F6 1265 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 PHLDB2Q86SQ0 1253 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 SYNE4Q8N205 404 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 ZNF579Q8NAF0 562 aaKnown RBP12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 KIAA1586Q9HCI6 787 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 SUGT1Q9Y2Z0 365 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 GNAT1P11488 350 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 GAS2L3Q86XJ1 694 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 SP8Q8IXZ3 490 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 PPP1R13BQ96KQ4 1090 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 ABCB11O95342 1321 aa12.95□□□□□ -0.34
AMBRA1-201ENST00000314845 OSTNP61366 133 aa12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 GNGT1P63211 74 aa12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 OR6B2Q6IFH4 312 aa12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 TAB3Q8N5C8 712 aaPredicted RBP12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 ENAHQ8N8S7 591 aaPredicted RBP12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 CCNYQ8ND76 341 aa12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 CRB1P82279 1406 aa12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 UHMK1Q8TAS1 419 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 PBKQ96KB5 322 aa12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 EIF4A3P38919 411 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 MKRN3Q13064 507 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 VSTM4Q8IW00 320 aa12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 CEP95Q96GE4 821 aa12.94□□□□□ -0.34
AMBRA1-201ENST00000314845 SPZ1Q9BXG8 430 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms