RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 COPB2P35606 906 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 PSMC6P62333 389 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 KCNH2Q12809 1159 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 NAB2Q15742 525 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 ZCWPW2Q504Y3 356 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 ARHGEF1Q92888 912 aaKnown RBP18.22■□□□□ 0.51
SSH3-201ENST00000308127 CAVIN3Q969G5 261 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 NYXQ9GZU5 481 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 JMJD4Q9H9V9 463 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 GDF3Q9NR23 364 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 NARFQ9UHQ1 456 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 AJAP1Q9UKB5 411 aaPredicted RBP18.22■□□□□ 0.51
SSH3-201ENST00000308127 RIMBP2O15034 1052 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 ATP2C2O75185 946 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 TMOD1P28289 359 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 PAK2Q13177 524 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 ASIC2Q16515 512 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 SLC18A3Q16572 532 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 ALS2CLQ60I27 953 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 CHADLQ6NUI6 762 aa18.22■□□□□ 0.51
SSH3-201ENST00000308127 ZNF571Q7Z3V5 609 aaPredicted RBP18.22■□□□□ 0.51
SSH3-201ENST00000308127 INPP4AQ96PE3 977 aaPredicted RBP18.22■□□□□ 0.51
SSH3-201ENST00000308127 CCDC88AQ3V6T2 1871 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 H0YHG0 523 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 PLA2G4BP0C869 781 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 GSTO1P78417 241 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 MEI1Q5TIA1 1274 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 ZNF804AQ7Z570 1209 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 CELF4Q9BZC1 486 aaKnown RBP18.21■□□□□ 0.51
SSH3-201ENST00000308127 RAB34Q9BZG1 259 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 CD209Q9NNX6 404 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 ROBO3Q96MS0 1386 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 SSU72P8A0A1W2PR75 194 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 SFI1A8K8P3 1242 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 E7EVH7 732 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 NR2F2P24468 414 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 PPP1R2P41236 205 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 RHBDL3P58872 404 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 CYP4A11Q02928 519 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 PABPC4Q13310 644 aaKnown RBP eCLIP18.21■□□□□ 0.51
SSH3-201ENST00000308127 TMEM119Q4V9L6 283 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 KCNV1Q6PIU1 500 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 SPAG5Q96R06 1193 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 RIOX1Q9H6W3 641 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 EMILIN3Q9NT22 766 aa18.21■□□□□ 0.51
SSH3-201ENST00000308127 CLIC2O15247 247 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 RFC4P35249 363 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 KCNA1Q09470 495 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 TAF4BQ92750 862 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 DPH5Q9H2P9 285 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 DCDC2CA8MYV0 355 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 MED24O75448 989 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 PPP4CP60510 307 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 ITIH3Q06033 890 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 TRIM59Q8IWR1 403 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 MTMR4Q9NYA4 1195 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 RSPH10B2B2RC85 870 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 LDHCP07864 332 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 RSPH10BP0C881 870 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 IFT88Q13099 833 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 RPS6KA1Q15418 735 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 USP38Q8NB14 1042 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 AMACRQ9UHK6 382 aa18.2■□□□□ 0.5
SSH3-201ENST00000308127 HNRNPH1P31943 449 aaKnown RBP18.19■□□□□ 0.5
SSH3-201ENST00000308127 CASP4P49662 377 aa18.19■□□□□ 0.5
SSH3-201ENST00000308127 SCNN1DP51172 638 aa18.19■□□□□ 0.5
SSH3-201ENST00000308127 MNAT1P51948 309 aa18.19■□□□□ 0.5
SSH3-201ENST00000308127 ZNF287Q9HBT7 754 aa18.19■□□□□ 0.5
SSH3-201ENST00000308127 RIC8AQ9NPQ8 531 aa18.19■□□□□ 0.5
SSH3-201ENST00000308127 DDX4Q9NQI0 724 aaKnown RBP18.19■□□□□ 0.5
SSH3-201ENST00000308127 BMP2KQ9NSY1 1161 aaPredicted RBP18.19■□□□□ 0.5
SSH3-201ENST00000308127 LAMB2P55268 1798 aa18.19■□□□□ 0.5
SSH3-201ENST00000308127 GBP6Q6ZN66 633 aa18.19■□□□□ 0.5
SSH3-201ENST00000308127 DHX37Q8IY37 1157 aaKnown RBP18.19■□□□□ 0.5
SSH3-201ENST00000308127 RNF10Q8N5U6 811 aaKnown RBP18.19■□□□□ 0.5
SSH3-201ENST00000308127 OTUD6BQ8N6M0 293 aa18.19■□□□□ 0.5
SSH3-201ENST00000308127 UBLCP1Q8WVY7 318 aaPredicted RBP18.19■□□□□ 0.5
SSH3-201ENST00000308127 HDAC9Q9UKV0 1011 aa18.19■□□□□ 0.5
SSH3-201ENST00000308127 GTF2IP78347 998 aa18.18■□□□□ 0.5
SSH3-201ENST00000308127 KSR1Q8IVT5 923 aa18.18■□□□□ 0.5
SSH3-201ENST00000308127 RBM46Q8TBY0 533 aaKnown RBP18.18■□□□□ 0.5
SSH3-201ENST00000308127 C6orf229H3BNL8 230 aa18.18■□□□□ 0.5
SSH3-201ENST00000308127 MYBP10242 640 aa18.18■□□□□ 0.5
SSH3-201ENST00000308127 CYP11B2P19099 503 aa18.18■□□□□ 0.5
SSH3-201ENST00000308127 HSD17B3P37058 310 aa18.18■□□□□ 0.5
SSH3-201ENST00000308127 CACNB3P54284 484 aa18.18■□□□□ 0.5
SSH3-201ENST00000308127 SKOR1P84550 965 aa18.18■□□□□ 0.5
SSH3-201ENST00000308127 CDC37Q16543 378 aaPredicted RBP18.18■□□□□ 0.5
SSH3-201ENST00000308127 COBLL1Q53SF7 1204 aa18.18■□□□□ 0.5
SSH3-201ENST00000308127 ARSHQ5FYA8 562 aa18.18■□□□□ 0.5
SSH3-201ENST00000308127 GPATCH11Q8N954 259 aa18.18■□□□□ 0.5
SSH3-201ENST00000308127 ZNF473Q8WTR7 871 aaKnown RBP18.18■□□□□ 0.5
SSH3-201ENST00000308127 GANQ9H2C0 597 aa18.18■□□□□ 0.5
SSH3-201ENST00000308127 PSTPIP2Q9H939 334 aa18.18■□□□□ 0.5
SSH3-201ENST00000308127 DAPK3O43293 454 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 KIAA0754O94854 1291 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 EPB41P11171 864 aaKnown RBP18.17■□□□□ 0.5
SSH3-201ENST00000308127 PRPF4BQ13523 1007 aaKnown RBP18.17■□□□□ 0.5
SSH3-201ENST00000308127 GRAPQ13588 217 aa18.17■□□□□ 0.5
SSH3-201ENST00000308127 UAP1Q16222 522 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms