RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 MAB21L3Q8N8X9 362 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 TRIM58Q8NG06 486 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 CENPTQ96BT3 561 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 ATP6V1G3Q96LB4 118 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 FIZ1Q96SL8 496 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 HINFPQ9BQA5 517 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 POLD4Q9HCU8 107 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 PRKAG3Q9UGI9 489 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 LUC7L2Q9Y383 392 aaKnown RBP6.02□□□□□ -1.45
VPS50-202ENST00000305866 NUTM2BA6NNL0 878 aaPredicted RBP6.01□□□□□ -1.45
VPS50-202ENST00000305866 NUTM2EB1AL46 878 aaPredicted RBP6.01□□□□□ -1.45
VPS50-202ENST00000305866 SLC37A4O43826 429 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 PLCG2P16885 1265 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 ATP2B4P23634 1241 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 PRKCIP41743 596 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 LIG3P49916 1009 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 IRX3P78415 501 aaPredicted RBP6.01□□□□□ -1.45
VPS50-202ENST00000305866 BMT2Q1RMZ1 405 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 TTC19Q6DKK2 380 aaPredicted RBP6.01□□□□□ -1.45
VPS50-202ENST00000305866 TXNRD3Q86VQ6 643 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 NLRP14Q86W24 1093 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 GUF1Q8N442 669 aaKnown RBP6.01□□□□□ -1.45
VPS50-202ENST00000305866 FAM76AQ8TAV0 307 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 CAPZA3Q96KX2 299 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 NUP88Q99567 741 aaPredicted RBP6.01□□□□□ -1.45
VPS50-202ENST00000305866 NAP1L4Q99733 375 aaKnown RBP6.01□□□□□ -1.45
VPS50-202ENST00000305866 TMEM47Q9BQJ4 181 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 SAMM50Q9Y512 469 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 RPTORQ8N122 1335 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 A0A087X0T9 212 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 BICDL2A1A5D9 508 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 ERLIN2O94905 339 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 FAM228BP0C875 321 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 PTGIRP43119 386 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 LRRC63Q05C16 580 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 DRP2Q13474 957 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 GNL2Q13823 731 aaKnown RBP6.01□□□□□ -1.45
VPS50-202ENST00000305866 PLS1Q14651 629 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 TMC3Q7Z5M5 1100 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 CCDC82Q8N4S0 544 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 BCAS4Q8TDM0 211 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.01□□□□□ -1.455e-8■■■■■ 65.3
VPS50-202ENST00000305866 SECISBP2LQ93073 1101 aaKnown RBP6.01□□□□□ -1.45
VPS50-202ENST00000305866 CYFIP2Q96F07 1278 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 ZNF287Q9HBT7 754 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 SLC40A1Q9NP59 571 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 RIC8AQ9NPQ8 531 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 PHIPQ8WWQ0 1821 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 NCANO14594 1321 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 IGSF9BQ9UPX0 1349 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 ANKRD33BA6NCL7 494 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 OPLAHO14841 1288 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 TRIM37O94972 964 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 CDK11BP21127 795 aaKnown RBP6.01□□□□□ -1.45
VPS50-202ENST00000305866 CXCR5P32302 372 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 MCM7P33993 719 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 KRT83P78385 493 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 CKAP4Q07065 602 aaKnown RBP6.01□□□□□ -1.45
VPS50-202ENST00000305866 GRIK3Q13003 919 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 FILIP1LQ4L180 1135 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 ASPRV1Q53RT3 343 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 TMEM63BQ5T3F8 832 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 ERMARDQ5T6L9 678 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 LEKR1Q6ZMV7 388 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 UNC13DQ70J99 1090 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 SND1Q7KZF4 910 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS50-202ENST00000305866 PNMA1Q8ND90 353 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 EHBP1Q8NDI1 1231 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 GPKOWQ92917 476 aaPredicted RBP eCLIP6.01□□□□□ -1.45
VPS50-202ENST00000305866 DRC1Q96MC2 740 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 NLRP3Q96P20 1036 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 GRHL1Q9NZI5 618 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 AGAP1Q9UPQ3 857 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 NEU2Q9Y3R4 380 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 NUMBLQ9Y6R0 609 aa6.01□□□□□ -1.45
VPS50-202ENST00000305866 LDHCP07864 332 aa6□□□□□ -1.45
VPS50-202ENST00000305866 IDEP14735 1019 aa6□□□□□ -1.45
VPS50-202ENST00000305866 MUTP22033 750 aa6□□□□□ -1.45
VPS50-202ENST00000305866 PRDX5P30044 214 aa6□□□□□ -1.45
VPS50-202ENST00000305866 GTF2A1P52655 376 aaPredicted RBP6□□□□□ -1.45
VPS50-202ENST00000305866 MGAT5Q09328 741 aa6□□□□□ -1.45
VPS50-202ENST00000305866 SLC15A2Q16348 729 aa6□□□□□ -1.45
VPS50-202ENST00000305866 TPTE2Q6XPS3 522 aa6□□□□□ -1.45
VPS50-202ENST00000305866 ZNF571Q7Z3V5 609 aaPredicted RBP6□□□□□ -1.45
VPS50-202ENST00000305866 TBC1D22AQ8WUA7 517 aa6□□□□□ -1.45
VPS50-202ENST00000305866 MYCBPQ99417 103 aaPredicted RBP6□□□□□ -1.45
VPS50-202ENST00000305866 STRA6Q9BX79 667 aa6□□□□□ -1.45
VPS50-202ENST00000305866 TSGA10Q9BZW7 698 aa6□□□□□ -1.45
VPS50-202ENST00000305866 BCAS3Q9H6U6 928 aa6□□□□□ -1.45
VPS50-202ENST00000305866 TPX2Q9ULW0 747 aaKnown RBP6□□□□□ -1.45
VPS50-202ENST00000305866 NFU1Q9UMS0 254 aa6□□□□□ -1.45
VPS50-202ENST00000305866 HYOU1Q9Y4L1 999 aa6□□□□□ -1.45
VPS50-202ENST00000305866 STK24Q9Y6E0 443 aa6□□□□□ -1.45
VPS50-202ENST00000305866 PITPNM2Q9BZ72 1349 aa6□□□□□ -1.45
VPS50-202ENST00000305866 ESYT3A0FGR9 886 aa6□□□□□ -1.45
VPS50-202ENST00000305866 MAP3K13O43283 966 aa6□□□□□ -1.45
VPS50-202ENST00000305866 BBOX1O75936 387 aa6□□□□□ -1.45
VPS50-202ENST00000305866 GHRP10912 638 aa6□□□□□ -1.45
VPS50-202ENST00000305866 PDHBP11177 359 aa6□□□□□ -1.45
VPS50-202ENST00000305866 GCFC2P16383 781 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms