RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 PREX2Q70Z35 1606 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 KRT3P12035 628 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 RASSF2P50749 326 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 MYLK4Q86YV6 388 aaPredicted RBP18.73■□□□□ 0.59
SHANK1-201ENST00000293441 MRFAP1L1Q96HT8 127 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 RASSF4Q9H2L5 321 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 ARHGEF37A1IGU5 675 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 H7C1W4 665 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 SLFNL1Q499Z3 407 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 SGO2Q562F6 1265 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 SYNE4Q8N205 404 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 NARFQ9UHQ1 456 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 EIF3CLB5ME19 914 aaKnown RBP18.72■□□□□ 0.59
SHANK1-201ENST00000293441 HEXIM1O94992 359 aaKnown RBP18.72■□□□□ 0.59
SHANK1-201ENST00000293441 TMCO4Q5TGY1 634 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 DARS2Q6PI48 645 aaKnown RBP18.72■□□□□ 0.59
SHANK1-201ENST00000293441 EIF3CQ99613 913 aaKnown RBP18.72■□□□□ 0.59
SHANK1-201ENST00000293441 PCDHA6Q9UN73 950 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 PCDHA8Q9Y5H6 950 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 SLC35F6Q8N357 371 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 PIGOQ8TEQ8 1089 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 CYP27B1O15528 508 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 CPP00450 1065 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 PRDX5P30044 214 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 MXI1P50539 228 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 ARHGAP4P98171 946 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 BCAP29Q9UHQ4 241 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 POLIQ9UNA4 740 aa18.72■□□□□ 0.59
SHANK1-201ENST00000293441 SNAP23O00161 211 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 SLFN14P0C7P3 912 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 BNIP3LO60238 219 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 MTMR1Q13613 665 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 MMEL1Q495T6 779 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 CATSPER4Q7RTX7 472 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 LINC00301Q8NCQ3 95 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 BANK1Q8NDB2 785 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 FAM71BQ8TC56 605 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 SRPRBQ9Y5M8 271 aaKnown RBP18.71■□□□□ 0.59
SHANK1-201ENST00000293441 CASP2P42575 452 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 C11orf57Q6ZUT1 292 aaPredicted RBP18.71■□□□□ 0.59
SHANK1-201ENST00000293441 RWDD2AQ9UIY3 292 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 SPDYE2BA6NHP3 402 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 SPDYE6P0CI01 402 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 RNF181Q9P0P0 153 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 ARHGEF18Q6ZSZ5 1173 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 RAB44Q7Z6P3 723 aaPredicted RBP18.71■□□□□ 0.59
SHANK1-201ENST00000293441 RNF10Q8N5U6 811 aaKnown RBP18.71■□□□□ 0.59
SHANK1-201ENST00000293441 CEP120Q8N960 986 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 ATP6V1E2Q96A05 226 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 MRPL47Q9HD33 250 aaKnown RBP18.71■□□□□ 0.59
SHANK1-201ENST00000293441 IRAK4Q9NWZ3 460 aa18.71■□□□□ 0.59
SHANK1-201ENST00000293441 TMTC4Q5T4D3 741 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 SURF1Q15526 300 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 PAGE5Q96GU1 130 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 ABCF3Q9NUQ8 709 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 PRPSAP2O60256 369 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 SEPT6Q14141 434 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 OR6B3Q8NGW1 331 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 PPP1R13BQ96KQ4 1090 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 RMDN3Q96TC7 470 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 MOCS3O95396 460 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 ZNF18P17022 549 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 STXBP2Q15833 593 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 LRRC8CQ8TDW0 803 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 TCP11Q8WWU5 503 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 BRIP1Q9BX63 1249 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 BHMT2Q9H2M3 363 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 HOXC10Q9NYD6 342 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 NRBP1Q9UHY1 535 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 MYO3BQ8WXR4 1341 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 TARBP1Q13395 1621 aaKnown RBP18.7■□□□□ 0.58
SHANK1-201ENST00000293441 PSMD2Q13200 908 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 ARMCX2Q7L311 632 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 STRBPQ96SI9 672 aaKnown RBP18.7■□□□□ 0.58
SHANK1-201ENST00000293441 CD209Q9NNX6 404 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 INPP5FQ9Y2H2 1132 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 ABCB11O95342 1321 aa18.7■□□□□ 0.58
SHANK1-201ENST00000293441 CLGNO14967 610 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 SEPT2Q15019 361 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 CDO1Q16878 200 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 FEM1BQ9UK73 627 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 SNRNP48Q6IEG0 339 aaKnown RBP18.69■□□□□ 0.58
SHANK1-201ENST00000293441 ZNF449Q6P9G9 518 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 ARHGEF1Q92888 912 aaKnown RBP18.69■□□□□ 0.58
SHANK1-201ENST00000293441 BASP1P80723 227 aaKnown RBP18.69■□□□□ 0.58
SHANK1-201ENST00000293441 LMCD1Q9NZU5 365 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 EFCAB8A8MWE9 144 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 LARGE1O95461 756 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 ZNF853P0CG23 659 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 CXCR5P32302 372 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 IQCB1Q15051 598 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 THNSL1Q8IYQ7 743 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 SLITRK6Q9H5Y7 841 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 NEDD4P46934 1319 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 MYL1P05976 194 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 THOC5Q13769 683 aaKnown RBP18.69■□□□□ 0.58
SHANK1-201ENST00000293441 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.69■□□□□ 0.58
SHANK1-201ENST00000293441 GANCQ8TET4 914 aa18.69■□□□□ 0.58
SHANK1-201ENST00000293441 SAMSN1Q9NSI8 373 aaKnown RBP18.69■□□□□ 0.58
SHANK1-201ENST00000293441 HSPH1Q92598 858 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms