RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 UNC13DQ70J99 1090 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 CCDC197Q8NCU1 140 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 SYN2Q92777 582 aaPredicted RBP16.39■□□□□ 0.21
XRCC1-201ENST00000262887 PSMD1Q99460 953 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 CNOT10Q9H9A5 744 aaKnown RBP16.39■□□□□ 0.21
XRCC1-201ENST00000262887 ZBTB1Q9Y2K1 713 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 MYH7BA7E2Y1 1941 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 A0A087X0T9 212 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 FAM228BP0C875 321 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 GYG1P46976 350 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 KRT71Q3SY84 523 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 GALNT17Q6IS24 598 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 DZIP3Q86Y13 1208 aaKnown RBP16.39■□□□□ 0.21
XRCC1-201ENST00000262887 SCFD2Q8WU76 684 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 ANKS1AQ92625 1134 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 TSG101Q99816 390 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 EBF2Q9HAK2 575 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 ADAMTS1Q9UHI8 967 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 CEP104O60308 925 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 FLT3P36888 993 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 RAPGEF1Q13905 1077 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 CRELD2Q6UXH1 353 aaPredicted RBP16.38■□□□□ 0.21
XRCC1-201ENST00000262887 ANKS4BQ8N8V4 417 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 PROCA1Q8NCQ7 364 aaPredicted RBP16.38■□□□□ 0.21
XRCC1-201ENST00000262887 PNMA1Q8ND90 353 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 ZNF483Q8TF39 744 aaPredicted RBP16.38■□□□□ 0.21
XRCC1-201ENST00000262887 NSMCE1Q8WV22 266 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 PIGBQ92521 554 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 STAMBPL1Q96FJ0 436 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 XPO6Q96QU8 1125 aaKnown RBP16.38■□□□□ 0.21
XRCC1-201ENST00000262887 LSM14BQ9BX40 385 aaKnown RBP16.38■□□□□ 0.21
XRCC1-201ENST00000262887 BATF3Q9NR55 127 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.38■□□□□ 0.212e-7■□□□□ 8.8
XRCC1-201ENST00000262887 MYMKA6NI61 221 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 SART1O43290 800 aaKnown RBP16.38■□□□□ 0.21
XRCC1-201ENST00000262887 CCDC63Q8NA47 563 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 PBKQ96KB5 322 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 MMTAG2Q9BU76 263 aaKnown RBP16.38■□□□□ 0.21
XRCC1-201ENST00000262887 AP1M1Q9BXS5 423 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 PRDM11Q9NQV5 511 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 CASZ1Q86V15 1759 aa16.38■□□□□ 0.21
XRCC1-201ENST00000262887 A0A0G2JS52 829 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 PVALEFA0A1B0GWK0 134 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 BHMG1C9JSJ3 638 aaPredicted RBP16.37■□□□□ 0.21
XRCC1-201ENST00000262887 NOL4O94818 638 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 KLHL30Q0D2K2 578 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 MYO1EQ12965 1108 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 ERMARDQ5T6L9 678 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 BARHL2Q9NY43 387 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 STRCQ7RTU9 1775 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 STXBP3O00186 592 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 KIF4AO95239 1232 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 GSTA1P08263 222 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 CYP2D6P10635 497 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 ADCY2Q08462 1091 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 ZNF34Q8IZ26 560 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 ARMC2Q8NEN0 867 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 MDM1Q8TC05 714 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 TCP11Q8WWU5 503 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 CENPTQ96BT3 561 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 FAM129AQ9BZQ8 928 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 DDX47Q9H0S4 455 aaKnown RBP16.37■□□□□ 0.21
XRCC1-201ENST00000262887 MTMR7Q9Y216 660 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 CTNND1O60716 968 aaKnown RBP16.37■□□□□ 0.21
XRCC1-201ENST00000262887 SKAP2O75563 359 aaPredicted RBP16.37■□□□□ 0.21
XRCC1-201ENST00000262887 RIPK1Q13546 671 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 CCDC152Q4G0S7 254 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 TMC3Q7Z5M5 1100 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 FAM133AQ8N9E0 248 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 ACTRT1Q8TDG2 376 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 THOC1Q96FV9 657 aaKnown RBP16.37■□□□□ 0.21
XRCC1-201ENST00000262887 GOLPH3Q9H4A6 298 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 DCP1AQ9NPI6 582 aaPredicted RBP16.37■□□□□ 0.21
XRCC1-201ENST00000262887 SLC12A4Q9UP95 1085 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 COL4A3BPQ9Y5P4 624 aa16.37■□□□□ 0.21
XRCC1-201ENST00000262887 MYH4Q9Y623 1939 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 ERVV-1B6SEH8 477 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 PGRMC1O00264 195 aaKnown RBP16.36■□□□□ 0.21
XRCC1-201ENST00000262887 DAPK3O43293 454 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 CLTAP09496 248 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 CYP19A1P11511 503 aaPredicted RBP16.36■□□□□ 0.21
XRCC1-201ENST00000262887 GNAQP50148 359 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 USP11P51784 963 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 LRRC41Q15345 812 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 PTPROQ16827 1216 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 SLC4A8Q2Y0W8 1093 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 SUSD4Q5VX71 490 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 AP1ARQ63HQ0 302 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 ZNF384Q8TF68 577 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 LARP4BQ92615 738 aaKnown RBP16.36■□□□□ 0.21
XRCC1-201ENST00000262887 ZNF804BA4D1E1 1349 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 COL1A1P02452 1464 aaPredicted RBP16.36■□□□□ 0.21
XRCC1-201ENST00000262887 CACNA1SQ13698 1873 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 NONOQ15233 471 aaKnown RBP eCLIP16.36■□□□□ 0.21
XRCC1-201ENST00000262887 KCTD19Q17RG1 926 aaPredicted RBP16.36■□□□□ 0.21
XRCC1-201ENST00000262887 PNMA8AQ86V59 439 aaPredicted RBP16.36■□□□□ 0.21
XRCC1-201ENST00000262887 CCHCR1Q8TD31 782 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 CDK5RAP3Q96JB5 506 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 SH3GL3Q99963 347 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 RIC8AQ9NPQ8 531 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms