RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 KIAA1024Q9UPX6 916 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 MYH4Q9Y623 1939 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 ATP2C2O75185 946 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 KRT18P05783 430 aaKnown RBP19.15■□□□□ 0.66
TRAM1-201ENST00000262213 CTNNA1P35221 906 aaKnown RBP19.15■□□□□ 0.66
TRAM1-201ENST00000262213 FNTAP49354 379 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 PTK2Q05397 1052 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 ADAM9Q13443 819 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 ZCWPW2Q504Y3 356 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 MICALCLQ6ZW33 695 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 PROM2Q8N271 834 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 NEUROG2Q9H2A3 272 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 GCOM1H8Y6P7 765 aaPredicted RBP19.14■□□□□ 0.65
TRAM1-201ENST00000262213 MYZAPP0CAP1 466 aa19.14■□□□□ 0.65
TRAM1-201ENST00000262213 SLC9A1P19634 815 aa19.14■□□□□ 0.65
TRAM1-201ENST00000262213 SF3A3Q12874 501 aaKnown RBP eCLIP19.14■□□□□ 0.65
TRAM1-201ENST00000262213 PSMD2Q13200 908 aa19.14■□□□□ 0.65
TRAM1-201ENST00000262213 SF3B2Q13435 895 aaKnown RBP19.14■□□□□ 0.65
TRAM1-201ENST00000262213 MREGQ8N565 214 aa19.14■□□□□ 0.65
TRAM1-201ENST00000262213 PRPF38AQ8NAV1 312 aaKnown RBP19.14■□□□□ 0.65
TRAM1-201ENST00000262213 NEDD1Q8NHV4 660 aa19.14■□□□□ 0.65
TRAM1-201ENST00000262213 WDR66Q8TBY9 1149 aa19.14■□□□□ 0.65
TRAM1-201ENST00000262213 CABS1Q96KC9 395 aa19.14■□□□□ 0.65
TRAM1-201ENST00000262213 SPAG5Q96R06 1193 aa19.14■□□□□ 0.65
TRAM1-201ENST00000262213 NUCKS1Q9H1E3 243 aaKnown RBP19.14■□□□□ 0.65
TRAM1-201ENST00000262213 BMP2KQ9NSY1 1161 aaPredicted RBP19.14■□□□□ 0.65
TRAM1-201ENST00000262213 DDX25Q9UHL0 483 aaKnown RBP19.14■□□□□ 0.65
TRAM1-201ENST00000262213 ROBO3Q96MS0 1386 aa19.14■□□□□ 0.65
TRAM1-201ENST00000262213 HMGB1P1B2RPK0 211 aaPredicted RBP19.14■□□□□ 0.65
TRAM1-201ENST00000262213 FLT3P36888 993 aa19.14■□□□□ 0.65
TRAM1-201ENST00000262213 TMEM119Q4V9L6 283 aa19.14■□□□□ 0.65
TRAM1-201ENST00000262213 ZNF287Q9HBT7 754 aa19.14■□□□□ 0.65
TRAM1-201ENST00000262213 SNED1Q8TER0 1413 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 KIF4AO95239 1232 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 HSPA9P38646 679 aaKnown RBP19.13■□□□□ 0.65
TRAM1-201ENST00000262213 USP8P40818 1118 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 KCNH2Q12809 1159 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 GPBP1Q86WP2 473 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 TRIM59Q8IWR1 403 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 CEP89Q96ST8 783 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 JPH2Q9BR39 696 aaPredicted RBP19.13■□□□□ 0.65
TRAM1-201ENST00000262213 TMBIM4Q9HC24 238 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 CD248Q9HCU0 757 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 POTEB3A0JP26 581 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 POTECB2RU33 542 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 RAD21O60216 631 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 GSTO1P78417 241 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 SETQ01105 290 aaPredicted RBP19.13■□□□□ 0.65
TRAM1-201ENST00000262213 UAP1Q16222 522 aaPredicted RBP19.13■□□□□ 0.65
TRAM1-201ENST00000262213 POTEBQ6S5H4 581 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 ZNF571Q7Z3V5 609 aaPredicted RBP19.13■□□□□ 0.65
TRAM1-201ENST00000262213 CD302Q8IX05 232 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 NCAPGQ9BPX3 1015 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 TRIM31Q9BZY9 425 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 LRRC27Q9C0I9 530 aa19.13■□□□□ 0.65
TRAM1-201ENST00000262213 ITGA4P13612 1032 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 PDIA5Q14554 519 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 SYN2Q92777 582 aaPredicted RBP19.12■□□□□ 0.65
TRAM1-201ENST00000262213 YY1AP1Q9H869 796 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 PDHBP11177 359 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 SLC16A2P36021 539 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 NFIXQ14938 502 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 DCAF17Q5H9S7 520 aaPredicted RBP19.12■□□□□ 0.65
TRAM1-201ENST00000262213 C16orf86Q6ZW13 317 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 CCDC91Q7Z6B0 441 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 HAS1Q92839 578 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 CYFIP2Q96F07 1278 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 ISCUQ9H1K1 167 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 DPH5Q9H2P9 285 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 EMILIN3Q9NT22 766 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 AMACRQ9UHK6 382 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 FBXL5Q9UKA1 691 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 PCDHA12Q9UN75 941 aa19.12■□□□□ 0.65
TRAM1-201ENST00000262213 SART1O43290 800 aaKnown RBP19.11■□□□□ 0.65
TRAM1-201ENST00000262213 FSBPO95073 299 aa19.11■□□□□ 0.65
TRAM1-201ENST00000262213 STAT3P40763 770 aa19.11■□□□□ 0.65
TRAM1-201ENST00000262213 SLC10A5Q5PT55 438 aa19.11■□□□□ 0.65
TRAM1-201ENST00000262213 TCERG1LQ5VWI1 586 aa19.11■□□□□ 0.65
TRAM1-201ENST00000262213 SCFD1Q8WVM8 642 aa19.11■□□□□ 0.65
TRAM1-201ENST00000262213 RTFDC1Q9BY42 306 aaPredicted RBP19.11■□□□□ 0.65
TRAM1-201ENST00000262213 GANQ9H2C0 597 aa19.11■□□□□ 0.65
TRAM1-201ENST00000262213 KRIT1O00522 736 aa19.11■□□□□ 0.65
TRAM1-201ENST00000262213 DAPK3O43293 454 aa19.11■□□□□ 0.65
TRAM1-201ENST00000262213 FAM107AO95990 144 aa19.11■□□□□ 0.65
TRAM1-201ENST00000262213 ECHS1P30084 290 aa19.11■□□□□ 0.65
TRAM1-201ENST00000262213 PICALMQ13492 652 aa19.11■□□□□ 0.65
TRAM1-201ENST00000262213 CCDC65Q8IXS2 484 aa19.11■□□□□ 0.65
TRAM1-201ENST00000262213 MYCBPQ99417 103 aaPredicted RBP19.11■□□□□ 0.65
TRAM1-201ENST00000262213 CELF4Q9BZC1 486 aaKnown RBP19.11■□□□□ 0.65
TRAM1-201ENST00000262213 PLCB1Q9NQ66 1216 aa19.11■□□□□ 0.65
TRAM1-201ENST00000262213 NOVA2Q9UNW9 492 aaKnown RBP19.11■□□□□ 0.65
TRAM1-201ENST00000262213 NOC2LQ9Y3T9 749 aaKnown RBP19.11■□□□□ 0.65
TRAM1-201ENST00000262213 PLA2G4BP0C869 781 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 NR2F2P24468 414 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 ZNF844Q08AG5 666 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 SWT1Q5T5J6 900 aaKnown RBP19.1■□□□□ 0.65
TRAM1-201ENST00000262213 TTBK2Q6IQ55 1244 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 ADAT2Q7Z6V5 191 aaKnown RBP19.1■□□□□ 0.65
TRAM1-201ENST00000262213 HDAC9Q9UKV0 1011 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 LDHCP07864 332 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms