RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 COL4A3BPQ9Y5P4 624 aa9.64□□□□□ -0.87
CALCOCO2-201ENST00000258947 PIK3CDO00329 1044 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 CLIC2O15247 247 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 ARHGAP6O43182 974 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 EPHX2P34913 555 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 CHMP4BP1P59074 171 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 GNG11P61952 73 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 ADAM9Q13443 819 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 NR1I3Q14994 352 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 TDRD12Q587J7 1177 aaKnown RBP9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 FAM178BQ8IXR5 827 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 RDH13Q8NBN7 331 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 NACC1Q96RE7 527 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 RIPK3Q9Y572 518 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 RSPH10B2B2RC85 870 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 RSPH10BP0C881 870 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 CYP11B2P19099 503 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 NR2F2P24468 414 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 NAP1L1P55209 391 aaKnown RBP9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 XKR9Q5GH70 373 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 HS2ST1Q7LGA3 356 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 UNC45AQ9H3U1 944 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 THAP9Q9H5L6 903 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 ACAD9Q9H845 621 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 INTS13Q9NVM9 706 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 SOWAHDA6NJG2 315 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 CCDC169A6NNP5 214 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 EDIL3O43854 480 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 URI1O94763 535 aaPredicted RBP9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 FKBP3Q00688 224 aaKnown RBP9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 TMEM119Q4V9L6 283 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 STXBP4Q6ZWJ1 553 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 CLMNQ96JQ2 1002 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 GINM1Q9NU53 330 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 COL20A1Q9P218 1284 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 DLEC1Q9Y238 1755 aa9.63□□□□□ -0.87
CALCOCO2-201ENST00000258947 CYP3A7-CYP3A51PA0A087WV96 503 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 NR3C2P08235 984 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 CCDC175P0C221 793 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 YBX3P16989 372 aaKnown RBP eCLIP9.62□□□□□ -0.873e-9■□□□□ 10.6
CALCOCO2-201ENST00000258947 CYP3A7P24462 503 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 CCND2P30279 289 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 DNM2P50570 870 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 GNPTABQ3T906 1256 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 CDKAL1Q5VV42 579 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 KIAA1328Q86T90 577 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 GUF1Q8N442 669 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 NSUN6Q8TEA1 469 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 PNMA2Q9UL42 364 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 COL2A1P02458 1487 aaPredicted RBP9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 ITGB5P18084 799 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 PSMD2Q13200 908 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 GRM1Q13255 1194 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 FAM102BQ5T8I3 360 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 TTI2Q6NXR4 508 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 OTOP1Q7RTM1 612 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 ARMC9Q7Z3E5 817 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 RBM46Q8TBY0 533 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 TSC1Q92574 1164 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 RUSC1Q9BVN2 902 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 NLRC4Q9NPP4 1024 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 RGPD3A6NKT7 1758 aaPredicted RBP9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 RGPD4Q7Z3J3 1758 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 IRF6O14896 467 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 CIITAP33076 1130 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 CYP2J2P51589 502 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 TKFCQ3LXA3 575 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 LENG9Q96B70 501 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 SLC10A4Q96EP9 437 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 SEMA6BQ9H3T3 888 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 PARVGQ9HBI0 331 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 PPP2R3BQ9Y5P8 575 aa9.62□□□□□ -0.87
CALCOCO2-201ENST00000258947 POTEB2H3BUK9 544 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 K7ENM7 598 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 EYA4O95677 639 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 FDX1P10109 184 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 DSG3P32926 999 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 MAP1SQ66K74 1059 aaPredicted RBP9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 MB21D1Q8N884 522 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 MNS1Q8NEH6 495 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 NEK11Q8NG66 645 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 ZSWIM4Q9H7M6 989 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 LIMA1Q9UHB6 759 aaKnown RBP9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 ZNF536O15090 1300 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 LGALS16A8MUM7 142 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 USP2O75604 605 aaPredicted RBP9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 CYP3A4P08684 503 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 NMT1P30419 496 aaKnown RBP9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 FXR1P51114 621 aaKnown RBP eCLIP9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 LRRC63Q05C16 580 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 MTF1Q14872 753 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 KSR1Q8IVT5 923 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 ANKRD13AQ8IZ07 590 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 PPP1R13BQ96KQ4 1090 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 PDCD2LQ9BRP1 358 aa9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 V9GYY5 206 aaPredicted RBP9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 CALUO43852 315 aaPredicted RBP9.61□□□□□ -0.87
CALCOCO2-201ENST00000258947 STX10O60499 249 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms