RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 YTHDF3Q7Z739 585 aaKnown RBP20.84■□□□□ 0.93
SNX4-201ENST00000251775 ZNF473Q8WTR7 871 aaKnown RBP20.84■□□□□ 0.93
SNX4-201ENST00000251775 MS4A14Q96JA4 679 aa20.84■□□□□ 0.93
SNX4-201ENST00000251775 MYO3BQ8WXR4 1341 aa20.84■□□□□ 0.93
SNX4-201ENST00000251775 ZSCAN5CA6NGD5 496 aaPredicted RBP20.83■□□□□ 0.93
SNX4-201ENST00000251775 ATP2B2Q01814 1243 aa20.83■□□□□ 0.93
SNX4-201ENST00000251775 NFIAQ12857 509 aa20.83■□□□□ 0.93
SNX4-201ENST00000251775 PDIA5Q14554 519 aa20.83■□□□□ 0.93
SNX4-201ENST00000251775 APOBEC3HQ6NTF7 200 aaKnown RBP20.83■□□□□ 0.93
SNX4-201ENST00000251775 UNC13DQ70J99 1090 aa20.83■□□□□ 0.93
SNX4-201ENST00000251775 KCTD1Q719H9 257 aa20.83■□□□□ 0.93
SNX4-201ENST00000251775 KCNK18Q7Z418 384 aa20.83■□□□□ 0.93
SNX4-201ENST00000251775 IFT20Q8IY31 132 aa20.83■□□□□ 0.93
SNX4-201ENST00000251775 CDK5RAP3Q96JB5 506 aa20.83■□□□□ 0.93
SNX4-201ENST00000251775 A1CFQ9NQ94 594 aaKnown RBP20.83■□□□□ 0.93
SNX4-201ENST00000251775 SIK3Q9Y2K2 1263 aa20.83■□□□□ 0.93
SNX4-201ENST00000251775 USP17L10C9JJH3 530 aa20.83■□□□□ 0.92
SNX4-201ENST00000251775 MPHOSPH10O00566 681 aaKnown RBP20.83■□□□□ 0.92
SNX4-201ENST00000251775 PJA2O43164 708 aa20.83■□□□□ 0.92
SNX4-201ENST00000251775 KLHDC7AQ5VTJ3 777 aa20.83■□□□□ 0.92
SNX4-201ENST00000251775 PPP1R18Q6NYC8 613 aa20.83■□□□□ 0.92
SNX4-201ENST00000251775 ZFPM1Q8IX07 1006 aa20.83■□□□□ 0.92
SNX4-201ENST00000251775 SNX29Q8TEQ0 813 aa20.83■□□□□ 0.92
SNX4-201ENST00000251775 IQCDQ96DY2 449 aa20.83■□□□□ 0.92
SNX4-201ENST00000251775 BRWD3Q6RI45 1802 aa20.83■□□□□ 0.92
SNX4-201ENST00000251775 ARFGEF1Q9Y6D6 1849 aa20.83■□□□□ 0.92
SNX4-201ENST00000251775 AKR1B10O60218 316 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 PPP1R37O75864 691 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 PTGISQ16647 500 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 GPIHBP1Q8IV16 184 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 ANKRD13CQ8N6S4 541 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 RAD54LQ92698 747 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 GJA10Q969M2 543 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 MTMR8Q96EF0 704 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 C10orf71Q711Q0 1435 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 PVALEFA0A1B0GWK0 134 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 ESYT3A0FGR9 886 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 NR1D1P20393 614 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 MAGEA1P43355 309 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 ECM1Q16610 540 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 PPP4R3AQ6IN85 833 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 MICALCLQ6ZW33 695 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 TEX2Q8IWB9 1127 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 CD302Q8IX05 232 aa20.82■□□□□ 0.92
SNX4-201ENST00000251775 FAM207AQ9NSI2 230 aaPredicted RBP20.82■□□□□ 0.92
SNX4-201ENST00000251775 NRXN2Q9P2S2 1712 aa20.81■□□□□ 0.92
SNX4-201ENST00000251775 SETQ01105 290 aaPredicted RBP20.81■□□□□ 0.92
SNX4-201ENST00000251775 HHIPL2Q6UWX4 724 aa20.81■□□□□ 0.92
SNX4-201ENST00000251775 MREGQ8N565 214 aa20.81■□□□□ 0.92
SNX4-201ENST00000251775 HAS1Q92839 578 aa20.81■□□□□ 0.92
SNX4-201ENST00000251775 JPH2Q9BR39 696 aaPredicted RBP20.81■□□□□ 0.92
SNX4-201ENST00000251775 RAB34Q9BZG1 259 aa20.81■□□□□ 0.92
SNX4-201ENST00000251775 EPB41L5Q9HCM4 733 aa20.81■□□□□ 0.92
SNX4-201ENST00000251775 HEXIM1O94992 359 aaKnown RBP20.81■□□□□ 0.92
SNX4-201ENST00000251775 SEC24CP53992 1094 aa20.81■□□□□ 0.92
SNX4-201ENST00000251775 PAK2Q13177 524 aa20.81■□□□□ 0.92
SNX4-201ENST00000251775 TMEM119Q4V9L6 283 aa20.81■□□□□ 0.92
SNX4-201ENST00000251775 KRT79Q5XKE5 535 aa20.81■□□□□ 0.92
SNX4-201ENST00000251775 CCDC155Q8N6L0 562 aa20.81■□□□□ 0.92
SNX4-201ENST00000251775 CUL5Q93034 780 aa20.81■□□□□ 0.92
SNX4-201ENST00000251775 TEKT1Q969V4 418 aa20.81■□□□□ 0.92
SNX4-201ENST00000251775 DDX25Q9UHL0 483 aaKnown RBP20.81■□□□□ 0.92
SNX4-201ENST00000251775 ZBTB5O15062 677 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 CLSTN1O94985 981 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 NPR1P16066 1061 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 MMP14P50281 582 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 GUCY2DQ02846 1103 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 CFAP221Q4G0U5 840 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 GPATCH4Q5T3I0 446 aaKnown RBP20.8■□□□□ 0.92
SNX4-201ENST00000251775 MYCBPAPQ8TBZ2 947 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 IFT81Q8WYA0 676 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 CCT8L2Q96SF2 557 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 DNAJC18Q9H819 358 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 KCNQ5Q9NR82 932 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 SIPA1L1O43166 1804 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 COL11A2P13942 1736 aaPredicted RBP20.8■□□□□ 0.92
SNX4-201ENST00000251775 LRRC53A6NM62 1247 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 BUB1O43683 1085 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 HLA-DOAP06340 250 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 CHRM1P11229 460 aaPredicted RBP20.8■□□□□ 0.92
SNX4-201ENST00000251775 HDLBPQ00341 1268 aaKnown RBP20.8■□□□□ 0.92
SNX4-201ENST00000251775 VWA3BQ502W6 1294 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 NLRP14Q86W24 1093 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 DDX12PQ92771 950 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 QTRT2Q9H974 415 aaKnown RBP20.8■□□□□ 0.92
SNX4-201ENST00000251775 PCDHAC2Q9Y5I4 1007 aa20.8■□□□□ 0.92
SNX4-201ENST00000251775 MDH1P40925 334 aaKnown RBP20.79■□□□□ 0.92
SNX4-201ENST00000251775 GUCY2FP51841 1108 aa20.79■□□□□ 0.92
SNX4-201ENST00000251775 SHROOM1Q2M3G4 852 aaPredicted RBP20.79■□□□□ 0.92
SNX4-201ENST00000251775 ASTE1Q2TB18 679 aaPredicted RBP20.79■□□□□ 0.92
SNX4-201ENST00000251775 GLIS3Q8NEA6 775 aa20.79■□□□□ 0.92
SNX4-201ENST00000251775 ATP6V1G3Q96LB4 118 aa20.79■□□□□ 0.92
SNX4-201ENST00000251775 VCPKMTQ9H867 229 aa20.79■□□□□ 0.92
SNX4-201ENST00000251775 CD248Q9HCU0 757 aa20.79■□□□□ 0.92
SNX4-201ENST00000251775 FAM196BA6NMK8 535 aa20.79■□□□□ 0.92
SNX4-201ENST00000251775 MRPL12P52815 198 aaKnown RBP20.79■□□□□ 0.92
SNX4-201ENST00000251775 RASSF7Q02833 373 aa20.79■□□□□ 0.92
SNX4-201ENST00000251775 GFPT1Q06210 699 aaPredicted RBP20.79■□□□□ 0.92
SNX4-201ENST00000251775 ACTN3Q08043 901 aaPredicted RBP20.79■□□□□ 0.92
SNX4-201ENST00000251775 GUF1Q8N442 669 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms