RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.84□□□□□ -0.996e-41■■■■□ 20.7
APOB-201ENST00000233242 SH3GLB2Q9NR46 395 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 DCAF8L1A6NGE4 600 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 AGTP01019 485 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 EDEM3Q9BZQ6 932 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 ZCCHC17Q9NP64 241 aaKnown RBP8.84□□□□□ -0.99
APOB-201ENST00000233242 RFX1P22670 979 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 MDH1P40925 334 aaKnown RBP8.84□□□□□ -0.99
APOB-201ENST00000233242 ST7Q9NRC1 585 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 TNNC2P02585 160 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 TTBK2Q6IQ55 1244 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 FAM89AQ96GI7 184 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 ITGB1BP2Q9UKP3 347 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 NOP56O00567 594 aaKnown RBP8.84□□□□□ -0.99
APOB-201ENST00000233242 MAP3K7CLP57077 242 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 PTCH1Q13635 1447 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 ACAD11Q709F0 780 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 HINFPQ9BQA5 517 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 NBPF3Q9H094 633 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 BZW1Q7L1Q6 419 aaKnown RBP8.84□□□□□ -0.99
APOB-201ENST00000233242 ING2Q9H160 280 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 TRPC5Q9UL62 973 aaPredicted RBP8.84□□□□□ -0.99
APOB-201ENST00000233242 hCG_1642624A0A1W2PR95 340 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 F8W031 263 aaPredicted RBP8.84□□□□□ -0.99
APOB-201ENST00000233242 DAB2IPQ5VWQ8 1189 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 ZBTB8OSQ8IWT0 167 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 FAM186BQ8IYM0 893 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 GJA10Q969M2 543 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 ALDH8A1Q9H2A2 487 aaPredicted RBP8.84□□□□□ -0.99
APOB-201ENST00000233242 KLRF2D3W0D1 207 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 CYP21A2P08686 494 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 DHX34Q14147 1143 aaKnown RBP8.84□□□□□ -0.99
APOB-201ENST00000233242 PKD2L1Q9P0L9 805 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 TBK1Q9UHD2 729 aa8.84□□□□□ -0.99
APOB-201ENST00000233242 DEAF1O75398 565 aaPredicted RBP8.84□□□□□ -1
APOB-201ENST00000233242 PMS2P54278 862 aa8.84□□□□□ -1
APOB-201ENST00000233242 FAM129AQ9BZQ8 928 aa8.84□□□□□ -1
APOB-201ENST00000233242 TMEM206Q9H813 350 aa8.84□□□□□ -1
APOB-201ENST00000233242 ESYT2A0FGR8 921 aa8.83□□□□□ -1
APOB-201ENST00000233242 NLRX1Q86UT6 975 aa8.83□□□□□ -1
APOB-201ENST00000233242 RFX6Q8HWS3 928 aa8.83□□□□□ -1
APOB-201ENST00000233242 RFX7Q2KHR2 1363 aa8.83□□□□□ -1
APOB-201ENST00000233242 PALMO75781 387 aa8.83□□□□□ -1
APOB-201ENST00000233242 LIG4P49917 911 aa8.83□□□□□ -1
APOB-201ENST00000233242 KIRREL3Q8IZU9 778 aa8.83□□□□□ -1
APOB-201ENST00000233242 KRT82Q9NSB4 513 aa8.83□□□□□ -1
APOB-201ENST00000233242 SEPT3Q9UH03 358 aa8.83□□□□□ -1
APOB-201ENST00000233242 SAP30BPQ9UHR5 308 aaKnown RBP8.83□□□□□ -1
APOB-201ENST00000233242 ADGBQ8N7X0 1667 aa8.83□□□□□ -1
APOB-201ENST00000233242 WDR7Q9Y4E6 1490 aa8.83□□□□□ -1
APOB-201ENST00000233242 A0A1W2PQC6 194 aa8.83□□□□□ -1
APOB-201ENST00000233242 SH2B2O14492 632 aaPredicted RBP8.83□□□□□ -1
APOB-201ENST00000233242 PRPF3O43395 683 aaKnown RBP8.83□□□□□ -1
APOB-201ENST00000233242 HACE1Q8IYU2 909 aa8.83□□□□□ -1
APOB-201ENST00000233242 LZICQ8WZA0 190 aa8.83□□□□□ -1
APOB-201ENST00000233242 RBM17Q96I25 401 aaKnown RBP8.83□□□□□ -1
APOB-201ENST00000233242 COPEO14579 308 aa8.83□□□□□ -1
APOB-201ENST00000233242 AGBL2Q5U5Z8 902 aa8.83□□□□□ -1
APOB-201ENST00000233242 WARS2Q9UGM6 360 aaKnown RBP8.83□□□□□ -1
APOB-201ENST00000233242 TJP3O95049 919 aa8.83□□□□□ -1
APOB-201ENST00000233242 MTA3Q9BTC8 594 aa8.83□□□□□ -1
APOB-201ENST00000233242 FAM107AO95990 144 aa8.83□□□□□ -1
APOB-201ENST00000233242 PTPROQ16827 1216 aa8.83□□□□□ -1
APOB-201ENST00000233242 ARMCX5Q6P1M9 558 aa8.83□□□□□ -1
APOB-201ENST00000233242 NSFL1CQ9UNZ2 370 aaKnown RBP8.83□□□□□ -1
APOB-201ENST00000233242 KDM1AO60341 852 aa8.83□□□□□ -1
APOB-201ENST00000233242 SERPINB2P05120 415 aa8.83□□□□□ -1
APOB-201ENST00000233242 ORC2Q13416 577 aaPredicted RBP8.83□□□□□ -1
APOB-201ENST00000233242 DNAL1Q4LDG9 190 aa8.83□□□□□ -1
APOB-201ENST00000233242 TTC13Q8NBP0 860 aa8.83□□□□□ -1
APOB-201ENST00000233242 RBM41Q96IZ5 413 aaKnown RBP8.83□□□□□ -1
APOB-201ENST00000233242 E7ENQ6 273 aa8.83□□□□□ -1
APOB-201ENST00000233242 KRT1P04264 644 aa8.83□□□□□ -1
APOB-201ENST00000233242 ODR4Q5SWX8 454 aa8.83□□□□□ -1
APOB-201ENST00000233242 NDUFA13Q9P0J0 144 aa8.83□□□□□ -1
APOB-201ENST00000233242 PIK3CAP42336 1068 aa8.83□□□□□ -1
APOB-201ENST00000233242 KPNB1Q14974 876 aaKnown RBP8.83□□□□□ -1
APOB-201ENST00000233242 LRRC8BQ6P9F7 803 aa8.83□□□□□ -1
APOB-201ENST00000233242 ANKFY1Q9P2R3 1169 aa8.83□□□□□ -1
APOB-201ENST00000233242 A0A1B0GW55 424 aa8.83□□□□□ -1
APOB-201ENST00000233242 NVLO15381 856 aaKnown RBP8.83□□□□□ -1
APOB-201ENST00000233242 KRT19P08727 400 aa8.83□□□□□ -1
APOB-201ENST00000233242 DUX4L2P0CJ85 424 aa8.83□□□□□ -1
APOB-201ENST00000233242 DUX4L3P0CJ86 424 aa8.83□□□□□ -1
APOB-201ENST00000233242 DUX4L4P0CJ87 422 aa8.83□□□□□ -1
APOB-201ENST00000233242 DUX4L5P0CJ88 424 aa8.83□□□□□ -1
APOB-201ENST00000233242 DUX4L6P0CJ89 424 aa8.83□□□□□ -1
APOB-201ENST00000233242 DUX4L7P0CJ90 424 aa8.83□□□□□ -1
APOB-201ENST00000233242 ACADSP16219 412 aa8.83□□□□□ -1
APOB-201ENST00000233242 NCF2P19878 526 aaPredicted RBP8.83□□□□□ -1
APOB-201ENST00000233242 TRIM60Q495X7 471 aa8.83□□□□□ -1
APOB-201ENST00000233242 DUX4Q9UBX2 424 aa8.83□□□□□ -1
APOB-201ENST00000233242 SMG5Q9UPR3 1016 aaKnown RBP8.83□□□□□ -1
APOB-201ENST00000233242 WDR62O43379 1518 aa8.83□□□□□ -1
APOB-201ENST00000233242 CHEK2O96017 543 aa8.83□□□□□ -1
APOB-201ENST00000233242 PTPREP23469 700 aa8.83□□□□□ -1
APOB-201ENST00000233242 ARID5BQ14865 1188 aa8.83□□□□□ -1
APOB-201ENST00000233242 RNF169Q8NCN4 708 aa8.83□□□□□ -1
APOB-201ENST00000233242 EHD2Q9NZN4 543 aa8.83□□□□□ -1
APOB-201ENST00000233242 PFASO15067 1338 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms