RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 NEK1Q96PY6 1258 aa23.11■■□□□ 1.29
CLN6-222ENST00000637667 GBF1Q92538 1859 aa23.11■■□□□ 1.29
CLN6-222ENST00000637667 KIF28PB7ZC32 967 aa23.1■■□□□ 1.29
CLN6-222ENST00000637667 ZNF618Q5T7W0 954 aa23.1■■□□□ 1.29
CLN6-222ENST00000637667 CNKSR3Q6P9H4 555 aa23.1■■□□□ 1.29
CLN6-222ENST00000637667 SYNE3Q6ZMZ3 975 aa23.1■■□□□ 1.29
CLN6-222ENST00000637667 NLRX1Q86UT6 975 aa23.1■■□□□ 1.29
CLN6-222ENST00000637667 SERINC5Q86VE9 423 aa23.1■■□□□ 1.29
CLN6-222ENST00000637667 GPR20Q99678 358 aa23.1■■□□□ 1.29
CLN6-222ENST00000637667 SENP7Q9BQF6 1050 aa23.1■■□□□ 1.29
CLN6-222ENST00000637667 USP26Q9BXU7 913 aa23.1■■□□□ 1.29
CLN6-222ENST00000637667 C17orf102A2RUQ5 167 aa23.09■■□□□ 1.29
CLN6-222ENST00000637667 CDC45O75419 566 aa23.09■■□□□ 1.29
CLN6-222ENST00000637667 SMIM10L2AP0DMW4 78 aa23.09■■□□□ 1.29
CLN6-222ENST00000637667 SMIM10L2BP0DMW5 78 aa23.09■■□□□ 1.29
CLN6-222ENST00000637667 WDR5P61964 334 aaKnown RBP23.09■■□□□ 1.29
CLN6-222ENST00000637667 APOA5Q6Q788 366 aa23.09■■□□□ 1.29
CLN6-222ENST00000637667 HOXC8P31273 242 aa23.08■■□□□ 1.29
CLN6-222ENST00000637667 EXOSC10Q01780 885 aaKnown RBP23.08■■□□□ 1.29
CLN6-222ENST00000637667 MBTPS1Q14703 1052 aa23.08■■□□□ 1.29
CLN6-222ENST00000637667 TSGA10IPQ3SY00 556 aa23.08■■□□□ 1.29
CLN6-222ENST00000637667 DHX32Q7L7V1 743 aaKnown RBP23.08■■□□□ 1.29
CLN6-222ENST00000637667 RASEFQ8IZ41 740 aa23.08■■□□□ 1.29
CLN6-222ENST00000637667 ATP6V0A1Q93050 837 aa23.08■■□□□ 1.29
CLN6-222ENST00000637667 PRDM6Q9NQX0 595 aa23.08■■□□□ 1.29
CLN6-222ENST00000637667 ABHD14A-ACY1A0A1B0GW23 586 aa23.07■■□□□ 1.28
CLN6-222ENST00000637667 THPOP40225 353 aa23.07■■□□□ 1.28
CLN6-222ENST00000637667 CCDC85BQ15834 202 aaPredicted RBP23.07■■□□□ 1.28
CLN6-222ENST00000637667 UBE2SQ16763 222 aa23.07■■□□□ 1.28
CLN6-222ENST00000637667 TCTN1Q2MV58 587 aa23.07■■□□□ 1.28
CLN6-222ENST00000637667 HEATR3Q7Z4Q2 680 aa23.07■■□□□ 1.28
CLN6-222ENST00000637667 TRIM50Q86XT4 487 aa23.07■■□□□ 1.28
CLN6-222ENST00000637667 GPRASP2Q96D09 838 aa23.07■■□□□ 1.28
CLN6-222ENST00000637667 TCEANC2Q96MN5 208 aa23.07■■□□□ 1.28
CLN6-222ENST00000637667 RBM28Q9NW13 759 aaKnown RBP23.07■■□□□ 1.28
CLN6-222ENST00000637667 TELO2Q9Y4R8 837 aa23.07■■□□□ 1.28
CLN6-222ENST00000637667 VCANP13611 3396 aa23.06■■□□□ 1.28
CLN6-222ENST00000637667 SPDYE3A6NKU9 549 aa23.06■■□□□ 1.28
CLN6-222ENST00000637667 TLL1O43897 1013 aa23.06■■□□□ 1.28
CLN6-222ENST00000637667 ARHGEF15O94989 841 aa23.06■■□□□ 1.28
CLN6-222ENST00000637667 SP4Q02446 784 aa23.06■■□□□ 1.28
CLN6-222ENST00000637667 TAP1Q03518 808 aa23.06■■□□□ 1.28
CLN6-222ENST00000637667 UTP14CQ5TAP6 766 aaKnown RBP23.06■■□□□ 1.28
CLN6-222ENST00000637667 GIMAP8Q8ND71 665 aaPredicted RBP23.06■■□□□ 1.28
CLN6-222ENST00000637667 CDHR1Q96JP9 859 aa23.06■■□□□ 1.28
CLN6-222ENST00000637667 RNPEPQ9H4A4 650 aa23.06■■□□□ 1.28
CLN6-222ENST00000637667 ZNF215Q9UL58 517 aaPredicted RBP23.06■■□□□ 1.28
CLN6-222ENST00000637667 BRPF3Q9ULD4 1205 aa23.06■■□□□ 1.28
CLN6-222ENST00000637667 RSPH10B2B2RC85 870 aa23.05■■□□□ 1.28
CLN6-222ENST00000637667 TREHO43280 583 aa23.05■■□□□ 1.28
CLN6-222ENST00000637667 EFCAB14O75071 495 aa23.05■■□□□ 1.28
CLN6-222ENST00000637667 RSPH10BP0C881 870 aa23.05■■□□□ 1.28
CLN6-222ENST00000637667 ITGB5P18084 799 aa23.05■■□□□ 1.28
CLN6-222ENST00000637667 DEFB103AP81534 67 aa23.05■■□□□ 1.28
CLN6-222ENST00000637667 KRT32Q14532 448 aa23.05■■□□□ 1.28
CLN6-222ENST00000637667 RTN1Q16799 776 aa23.05■■□□□ 1.28
CLN6-222ENST00000637667 ADCK5Q3MIX3 580 aa23.05■■□□□ 1.28
CLN6-222ENST00000637667 CERS4Q9HA82 394 aa23.05■■□□□ 1.28
CLN6-222ENST00000637667 EMSYQ7Z589 1322 aa23.05■■□□□ 1.28
CLN6-222ENST00000637667 CNTNAP5Q8WYK1 1306 aa23.05■■□□□ 1.28
CLN6-222ENST00000637667 PRRC2BQ5JSZ5 2229 aaKnown RBP23.04■■□□□ 1.28
CLN6-222ENST00000637667 ZBTB43O43298 467 aa23.04■■□□□ 1.28
CLN6-222ENST00000637667 ATP9AO75110 1047 aa23.04■■□□□ 1.28
CLN6-222ENST00000637667 LGR5O75473 907 aa23.04■■□□□ 1.28
CLN6-222ENST00000637667 GNAT1P11488 350 aa23.04■■□□□ 1.28
CLN6-222ENST00000637667 KCNA2P16389 499 aa23.04■■□□□ 1.28
CLN6-222ENST00000637667 IKBKEQ14164 716 aa23.04■■□□□ 1.28
CLN6-222ENST00000637667 WWC2Q6AWC2 1192 aa23.04■■□□□ 1.28
CLN6-222ENST00000637667 TMCO2Q7Z6W1 182 aaPredicted RBP23.04■■□□□ 1.28
CLN6-222ENST00000637667 ZBED2Q9BTP6 218 aa23.04■■□□□ 1.28
CLN6-222ENST00000637667 SETD4Q9NVD3 440 aa23.04■■□□□ 1.28
CLN6-222ENST00000637667 PCDHA6Q9UN73 950 aa23.04■■□□□ 1.28
CLN6-222ENST00000637667 PCDHA8Q9Y5H6 950 aa23.04■■□□□ 1.28
CLN6-222ENST00000637667 UBIAD1Q9Y5Z9 338 aa23.04■■□□□ 1.28
CLN6-222ENST00000637667 EPOPA6NHQ4 379 aa23.03■■□□□ 1.28
CLN6-222ENST00000637667 RBAK-RBAKDNI3L0D1 243 aa23.03■■□□□ 1.28
CLN6-222ENST00000637667 RFXAPO00287 272 aa23.03■■□□□ 1.28
CLN6-222ENST00000637667 FUT2Q10981 343 aa23.03■■□□□ 1.28
CLN6-222ENST00000637667 TJAP1Q5JTD0 557 aa23.03■■□□□ 1.28
CLN6-222ENST00000637667 ARNTL2Q8WYA1 636 aa23.03■■□□□ 1.28
CLN6-222ENST00000637667 SYMPKQ92797 1274 aaKnown RBP23.03■■□□□ 1.28
CLN6-222ENST00000637667 THEGQ9P2T0 379 aa23.03■■□□□ 1.28
CLN6-222ENST00000637667 NCOR1O75376 2440 aa23.02■■□□□ 1.28
CLN6-222ENST00000637667 CAND2O75155 1236 aa23.02■■□□□ 1.28
CLN6-222ENST00000637667 MTMR1Q13613 665 aa23.02■■□□□ 1.28
CLN6-222ENST00000637667 MICALL1Q8N3F8 863 aa23.02■■□□□ 1.28
CLN6-222ENST00000637667 EHMT1Q9H9B1 1298 aa23.02■■□□□ 1.28
CLN6-222ENST00000637667 JADE2Q9NQC1 790 aa23.02■■□□□ 1.28
CLN6-222ENST00000637667 KLF18A0A0U1RQI7 1052 aa23.01■■□□□ 1.27
CLN6-222ENST00000637667 LCHNA4D1U4 455 aa23.01■■□□□ 1.27
CLN6-222ENST00000637667 GOLGA8AA7E2F4 631 aa23.01■■□□□ 1.27
CLN6-222ENST00000637667 GOLGA8BA8MQT2 603 aa23.01■■□□□ 1.27
CLN6-222ENST00000637667 GTPBP6O43824 516 aaPredicted RBP23.01■■□□□ 1.27
CLN6-222ENST00000637667 GJB5O95377 273 aa23.01■■□□□ 1.27
CLN6-222ENST00000637667 HMGB1P09429 215 aaKnown RBP23.01■■□□□ 1.27
CLN6-222ENST00000637667 POU3F3P20264 500 aaPredicted RBP23.01■■□□□ 1.27
CLN6-222ENST00000637667 TCF7P36402 384 aaPredicted RBP23.01■■□□□ 1.27
CLN6-222ENST00000637667 NAPAP54920 295 aa23.01■■□□□ 1.27
CLN6-222ENST00000637667 TYW1BQ6NUM6 668 aa23.01■■□□□ 1.27
CLN6-222ENST00000637667 PPP1R18Q6NYC8 613 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms