RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 AKR1B15C9JRZ8 316 aaPredicted RBP21.9■■□□□ 1.1
TREX1-205ENST00000625293 ARHGAP6O43182 974 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 STX10O60499 249 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 CYP11B2P19099 503 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 USP14P54578 494 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 RBL2Q08999 1139 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 COASYQ13057 564 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 CEP135Q66GS9 1140 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 POTEGQ6S5H5 508 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 POTEEQ6S8J3 1075 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 ZNF507Q8TCN5 953 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 PANX2Q96RD6 677 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 BAG1Q99933 345 aaPredicted RBP21.9■■□□□ 1.1
TREX1-205ENST00000625293 POLR3CQ9BUI4 534 aaPredicted RBP21.9■■□□□ 1.1
TREX1-205ENST00000625293 PPP1R9AQ9ULJ8 1098 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 FZD1Q9UP38 647 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 PITPNM2Q9BZ72 1349 aa21.9■■□□□ 1.1
TREX1-205ENST00000625293 FRMD3A2A2Y4 597 aa21.89■■□□□ 1.1
TREX1-205ENST00000625293 LGALS16A8MUM7 142 aa21.89■■□□□ 1.1
TREX1-205ENST00000625293 PSMD10O75832 226 aa21.89■■□□□ 1.1
TREX1-205ENST00000625293 IDEP14735 1019 aa21.89■■□□□ 1.1
TREX1-205ENST00000625293 CEP55Q53EZ4 464 aa21.89■■□□□ 1.1
TREX1-205ENST00000625293 SAMD1Q6SPF0 538 aaPredicted RBP21.89■■□□□ 1.1
TREX1-205ENST00000625293 MYRIPQ8NFW9 859 aa21.89■■□□□ 1.1
TREX1-205ENST00000625293 BMP2KQ9NSY1 1161 aaPredicted RBP21.89■■□□□ 1.1
TREX1-205ENST00000625293 PCDHA2Q9Y5H9 948 aa21.89■■□□□ 1.1
TREX1-205ENST00000625293 SSC5DA1L4H1 1573 aa21.89■■□□□ 1.09
TREX1-205ENST00000625293 EML1O00423 815 aa21.89■■□□□ 1.09
TREX1-205ENST00000625293 GYPCP04921 128 aa21.89■■□□□ 1.09
TREX1-205ENST00000625293 ARSHQ5FYA8 562 aa21.89■■□□□ 1.09
TREX1-205ENST00000625293 MOB2Q70IA6 237 aa21.89■■□□□ 1.09
TREX1-205ENST00000625293 OTOP1Q7RTM1 612 aa21.89■■□□□ 1.09
TREX1-205ENST00000625293 GPBP1Q86WP2 473 aa21.89■■□□□ 1.09
TREX1-205ENST00000625293 KCTD17Q8N5Z5 321 aa21.89■■□□□ 1.09
TREX1-205ENST00000625293 PPP2R3BQ9Y5P8 575 aa21.89■■□□□ 1.09
TREX1-205ENST00000625293 MEIS1O00470 390 aa21.88■■□□□ 1.09
TREX1-205ENST00000625293 NFIBO00712 420 aa21.88■■□□□ 1.09
TREX1-205ENST00000625293 MFAP3LO75121 409 aa21.88■■□□□ 1.09
TREX1-205ENST00000625293 PTPRAP18433 802 aa21.88■■□□□ 1.09
TREX1-205ENST00000625293 FECHP22830 423 aa21.88■■□□□ 1.09
TREX1-205ENST00000625293 BACE1P56817 501 aa21.88■■□□□ 1.09
TREX1-205ENST00000625293 PPP2R5CQ13362 524 aa21.88■■□□□ 1.09
TREX1-205ENST00000625293 PTPN14Q15678 1187 aa21.88■■□□□ 1.09
TREX1-205ENST00000625293 PPFIBP1Q86W92 1011 aa21.88■■□□□ 1.09
TREX1-205ENST00000625293 RPAP3Q9H6T3 665 aaPredicted RBP21.88■■□□□ 1.09
TREX1-205ENST00000625293 PANK4Q9NVE7 773 aa21.88■■□□□ 1.09
TREX1-205ENST00000625293 COL20A1Q9P218 1284 aa21.88■■□□□ 1.09
TREX1-205ENST00000625293 ABT1Q9ULW3 272 aaKnown RBP21.88■■□□□ 1.09
TREX1-205ENST00000625293 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.88■■□□□ 1.09
TREX1-205ENST00000625293 UQCRHLA0A096LP55 91 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 A0A1W2PQC6 194 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 UQCRHP07919 91 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 PSMC6P62333 389 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 SPP2Q13103 211 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 FAM114A1Q8IWE2 563 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 SYT2Q8N9I0 419 aaPredicted RBP21.87■■□□□ 1.09
TREX1-205ENST00000625293 GLIS3Q8NEA6 775 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 C12orf42Q96LP6 360 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 WRNIP1Q96S55 665 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 EIF2AK1Q9BQI3 630 aaKnown RBP21.87■■□□□ 1.09
TREX1-205ENST00000625293 TANGO6Q9C0B7 1094 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 MAGEC2Q9UBF1 373 aaPredicted RBP21.87■■□□□ 1.09
TREX1-205ENST00000625293 RABGAP1Q9Y3P9 1069 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 FLOT1O75955 427 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 SSBP05455 408 aaKnown RBP eCLIP21.87■■□□□ 1.09
TREX1-205ENST00000625293 UBXN2AP68543 259 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 SETQ01105 290 aaPredicted RBP21.87■■□□□ 1.09
TREX1-205ENST00000625293 LRRC63Q05C16 580 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 FAM26FQ5R3K3 315 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 B3GNT9Q6UX72 402 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 MCF2L2Q86YR7 1114 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 CCDC65Q8IXS2 484 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 MB21D1Q8N884 522 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 ZNF280CQ8ND82 737 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 ZKSCAN4Q969J2 545 aaPredicted RBP21.87■■□□□ 1.09
TREX1-205ENST00000625293 CCDC51Q96ER9 411 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 CNOT6LQ96LI5 555 aaKnown RBP21.87■■□□□ 1.09
TREX1-205ENST00000625293 HSD17B14Q9BPX1 270 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 AS3MTQ9HBK9 375 aa21.87■■□□□ 1.09
TREX1-205ENST00000625293 TRPM7Q96QT4 1865 aa21.86■■□□□ 1.09
TREX1-205ENST00000625293 FRMPD4Q14CM0 1322 aa21.86■■□□□ 1.09
TREX1-205ENST00000625293 CCP110O43303 1012 aa21.86■■□□□ 1.09
TREX1-205ENST00000625293 CASP14P31944 242 aa21.86■■□□□ 1.09
TREX1-205ENST00000625293 FXR1P51114 621 aaKnown RBP eCLIP21.86■■□□□ 1.09
TREX1-205ENST00000625293 PRKG1Q13976 671 aa21.86■■□□□ 1.09
TREX1-205ENST00000625293 TRIM14Q14142 442 aa21.86■■□□□ 1.09
TREX1-205ENST00000625293 LRCH2Q5VUJ6 765 aa21.86■■□□□ 1.09
TREX1-205ENST00000625293 SAMD3Q8N6K7 520 aa21.86■■□□□ 1.09
TREX1-205ENST00000625293 RAVER2Q9HCJ3 691 aaKnown RBP21.86■■□□□ 1.09
TREX1-205ENST00000625293 MAP3K20Q9NYL2 800 aaKnown RBP21.86■■□□□ 1.09
TREX1-205ENST00000625293 DNM3Q9UQ16 869 aa21.86■■□□□ 1.09
TREX1-205ENST00000625293 NPHP3-ACAD11A0A0J9YXS1 232 aa21.85■■□□□ 1.09
TREX1-205ENST00000625293 FDX1P10109 184 aa21.85■■□□□ 1.09
TREX1-205ENST00000625293 GTF2F1P35269 517 aaKnown RBP eCLIP21.85■■□□□ 1.09
TREX1-205ENST00000625293 UBXN1Q04323 297 aa21.85■■□□□ 1.09
TREX1-205ENST00000625293 ZCWPW2Q504Y3 356 aa21.85■■□□□ 1.09
TREX1-205ENST00000625293 CNGA4Q8IV77 575 aa21.85■■□□□ 1.09
TREX1-205ENST00000625293 KLRG1Q96E93 195 aa21.85■■□□□ 1.09
TREX1-205ENST00000625293 MXRA8Q9BRK3 442 aa21.85■■□□□ 1.09
TREX1-205ENST00000625293 TUBGCP2Q9BSJ2 902 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms