RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 KRT33BQ14525 404 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 NFIXQ14938 502 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 PPP1R2P3Q6NXS1 205 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 OR8K1Q8NGG5 319 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 FOXP1Q9H334 677 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 ELP3Q9H9T3 547 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 PHLPP2Q6ZVD8 1323 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 KIDINS220Q9ULH0 1771 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 ADGRB3O60242 1522 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 CCDC160A6NGH7 325 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 ASB14A6NK59 587 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 SLC4A1P02730 911 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 H2AFZP0C0S5 128 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 ADCY8P40145 1251 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 ZSCAN26Q16670 478 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 UBE2SQ16763 222 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 TTBK2Q6IQ55 1244 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 H2AFVQ71UI9 128 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 TRIML1Q8N9V2 468 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 CCNYQ8ND76 341 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 MRFAP1L1Q96HT8 127 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 MSTO1Q9BUK6 570 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 PARVGQ9HBI0 331 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 CNOT7Q9UIV1 285 aaKnown RBP10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 KIF13AQ9H1H9 1805 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 RGS12O14924 1447 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 CYP2D7A0A087X1C5 515 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 TSPY1Q01534 308 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 CCDC51Q96ER9 411 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 PCIF1Q9H4Z3 704 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 ZSWIM6Q9HCJ5 1215 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 ANGPTL3Q9Y5C1 460 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 NCOA3Q9Y6Q9 1424 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 SAT1P21673 171 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 STMN2Q93045 179 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 SCYL1Q96KG9 808 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 USP17L15C9J2P7 530 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 USP17L13C9JLJ4 530 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 USP17L11C9JVI0 530 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 USP17L18D6R9N7 530 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 USP17L22D6RA61 530 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 USP17L17D6RBQ6 530 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 USP17L19D6RCP7 530 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 USP17L20D6RJB6 530 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 FDX1P10109 184 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 CMA1P23946 247 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 USP17L24Q0WX57 530 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 AP3B2Q13367 1082 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 MTX1Q13505 466 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 RFX6Q8HWS3 928 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 OR6B3Q8NGW1 331 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 CDKL2Q92772 493 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 PARK7Q99497 189 aaKnown RBP10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 ACAD9Q9H845 621 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 CPS1P31327 1500 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 GOLGA8SH3BPF8 625 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 HUNKP57058 714 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 TNFAIP2Q03169 654 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 PSMD6Q15008 389 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 SEPT2Q15019 361 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 ARL13BQ3SXY8 428 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 DGKHQ86XP1 1220 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 CELF1Q92879 486 aaKnown RBP10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 HEXIM2Q96MH2 286 aaKnown RBP10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 USP28Q96RU2 1077 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 STK17AQ9UEE5 414 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 PYCARDQ9ULZ3 195 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 ZNF148Q9UQR1 794 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 MTMR6Q9Y217 621 aa10.63□□□□□ -0.71
CLTCL1-211ENST00000621271 NDUFAB1O14561 156 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 STAT3P40763 770 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 PTPN12Q05209 780 aaKnown RBP10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 ALCAMQ13740 583 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 PPP2R5EQ16537 467 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 KAZNQ674X7 775 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 OR6B2Q6IFH4 312 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 RUFY4Q6ZNE9 571 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 PNMA8AQ86V59 439 aaPredicted RBP10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 LRRC8AQ8IWT6 810 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 YAF2Q8IY57 180 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 THNSL1Q8IYQ7 743 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 RPUSD2Q8IZ73 545 aaKnown RBP10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 RPAP1Q9BWH6 1393 aaPredicted RBP10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 XPO4Q9C0E2 1151 aaKnown RBP10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 PUS7LQ9H0K6 701 aaKnown RBP10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 MOSPD1Q9UJG1 213 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 MAD1L1Q9Y6D9 718 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 CRB1P82279 1406 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 CD2BP2O95400 341 aaKnown RBP10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 INPP5BP32019 993 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 NNMTP40261 264 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 CACNB1Q02641 598 aaPredicted RBP10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 PAK2Q13177 524 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 BRD3Q15059 726 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 RBBP5Q15291 538 aaKnown RBP10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 FBXO18Q8NFZ0 1043 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 H7C1W4 665 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 CYP19A1P11511 503 aaPredicted RBP10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 PRDX5P30044 214 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms