RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 UTP11Q9Y3A2 253 aaKnown RBP10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 SHBGP04278 402 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 ATP2A2P16615 1042 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 COPB2P35606 906 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 KLHL30Q0D2K2 578 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 STK4Q13043 487 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 SGMS1Q86VZ5 419 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 CCDC24Q8N4L8 307 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 PLBD2Q8NHP8 589 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 GDF3Q9NR23 364 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 TCP11L1Q9NUJ3 509 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 ATXN2Q99700 1313 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 TTI1O43156 1089 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 PAPOLAP51003 745 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 VSIG1Q86XK7 387 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 FBXL16Q8N461 479 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 IFT74Q96LB3 600 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 ZNF570Q96NI8 536 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 PDS5AQ29RF7 1337 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 OVOS2A0A0G2JMS6 1433 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 CYP2D7A0A087X1C5 515 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 PECAM1P16284 738 aaPredicted RBP10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 USP4Q13107 963 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 UBE4AQ14139 1066 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 MEA1Q16626 185 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 ANKRD20A2Q5SQ80 823 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 ANKRD20A1Q5TYW2 823 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 SFMBT2Q5VUG0 894 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 ANKRD20A3Q5VUR7 823 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 SPTY2D1Q68D10 685 aaPredicted RBP10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 MIS18BP1Q6P0N0 1132 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 ARMC9Q7Z3E5 817 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 DZIP3Q86Y13 1208 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 TMTC2Q8N394 836 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 ZNF507Q8TCN5 953 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 TRIM51Q9BSJ1 452 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 PACSIN1Q9BY11 444 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 AZI2Q9H6S1 392 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 TRMT112Q9UI30 125 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 TSKSQ9UJT2 592 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 HEG1Q9ULI3 1381 aa10.68□□□□□ -0.7
TNFAIP3-210ENST00000620204 KLHL33A6NCF5 533 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 SPDYE3A6NKU9 549 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 TRAF5O00463 557 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 ERFP50548 548 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 MTMR3Q13615 1198 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 DENND2CQ68D51 928 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 PEX26Q7Z412 305 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 FAM133AQ8N9E0 248 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 TEKT4Q8WW24 435 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 KDM4CQ9H3R0 1056 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 ZFATQ9P243 1243 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 TRPM3Q9HCF6 1732 aaPredicted RBP10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 MARF1Q9Y4F3 1742 aaKnown RBP10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 SMIM22K7EJ46 135 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 NQO1P15559 274 aaKnown RBP10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 DRD4P21917 467 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 RAD23BP54727 409 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 TRAF1Q13077 416 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 LAMB3Q13751 1172 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 STAG2Q8N3U4 1231 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 ESR2Q92731 530 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 STRBPQ96SI9 672 aaKnown RBP10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 PLCB1Q9NQ66 1216 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 PLAGL2Q9UPG8 496 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 ORC4O43929 436 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 PYGLP06737 847 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 CCNE1P24864 410 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 INF2Q27J81 1249 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 HOOK3Q86VS8 718 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 PYM1Q9BRP8 204 aaKnown RBP10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 ETNK1Q9HBU6 452 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 FGFR1OP2Q9NVK5 253 aa10.67□□□□□ -0.7
TNFAIP3-210ENST00000620204 DNAJC8O75937 253 aaPredicted RBP10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 ITGA4P13612 1032 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 MUM1Q2TAK8 710 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 TCERG1LQ5VWI1 586 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 PDXDC2PQ6P474 469 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 CCDC84Q86UT8 332 aaPredicted RBP10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 RNF10Q8N5U6 811 aaKnown RBP10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 CCHCR1Q8TD31 782 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 LSM14BQ9BX40 385 aaKnown RBP10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 NEUROG2Q9H2A3 272 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 DISC1Q9NRI5 854 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 DLGAP2Q9P1A6 1054 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 DBR1Q9UK59 544 aaKnown RBP10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 SNX24Q9Y343 169 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 LUC7L3O95232 432 aaKnown RBP10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 HSPA9P38646 679 aaKnown RBP10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 NELFCDQ8IXH7 590 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 NAF1Q96HR8 494 aaKnown RBP10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 FMO2Q99518 471 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 RNF41Q9H4P4 317 aaPredicted RBP10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 ARHGEF10LQ9HCE6 1279 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 SLC12A6Q9UHW9 1150 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 AGAP1Q9UPQ3 857 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 MYH13Q9UKX3 1938 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 PPIP5K2O43314 1243 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 PRLRP16471 622 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms