RNA–Protein interactions for RNA: ENST00000617556.4

CYFIP1-207, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene CYFIP1, Length 5,674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-207ENST00000617556 CAPN2P17655 700 aa13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 LACTBP83111 547 aaPredicted RBP13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 HADHQ16836 314 aaKnown RBP13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 SNRNP48Q6IEG0 339 aaKnown RBP13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 C2orf69Q8N8R5 385 aa13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 RAD54LQ92698 747 aa13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 KAZALD1Q96I82 304 aa13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 GOLPH3LQ9H4A5 285 aa13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 NRBP1Q9UHY1 535 aa13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 CUL4BQ13620 913 aa13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 NSUN6Q8TEA1 469 aaKnown RBP13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 TRIM31Q9BZY9 425 aa13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 EPB41L4AQ9HCS5 686 aaPredicted RBP13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 KCNK9Q9NPC2 374 aa13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 RAB20Q9NX57 234 aa13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 TMEM260Q9NX78 707 aa13.39□□□□□ -0.27
CYFIP1-207ENST00000617556 KCNK3O14649 394 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 BUB1O43683 1085 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 NSFP46459 744 aaKnown RBP13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 USP11P51784 963 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 MTMR3Q13615 1198 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 TCP11X2Q5H9J9 407 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 SLC16A10Q8TF71 515 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 PVALEFA0A1B0GWK0 134 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 TLR3O15455 904 aaKnown RBP13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 SEMA3FQ13275 785 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 CDC42EP5Q6NZY7 148 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 STAG2Q8N3U4 1231 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 BPIFA3Q9BQP9 254 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 ZDHHC9Q9Y397 364 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 POTEMA6NI47 508 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 KRT76Q01546 638 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 SPP2Q13103 211 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 PPP1R2P3Q6NXS1 205 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 RSBN1LQ6PCB5 846 aaPredicted RBP13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 RNF146Q9NTX7 359 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 ZHX1Q9UKY1 873 aaPredicted RBP13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 UBR1Q8IWV7 1749 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 ZBED6P86452 979 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 TRIM11Q96F44 468 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 PPP1R13BQ96KQ4 1090 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 MED10Q9BTT4 135 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 NKIRAS1Q9NYS0 192 aa13.38□□□□□ -0.27
CYFIP1-207ENST00000617556 WDR64B1ANS9 1081 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 KIF28PB7ZC32 967 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 RGL2O15211 777 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 ATP2C1P98194 919 aaPredicted RBP13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 C6orf163Q5TEZ5 329 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 EEPD1Q7L9B9 569 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 RNF169Q8NCN4 708 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 NYAP2Q9P242 653 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 SARM1Q6SZW1 724 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 POTEDQ86YR6 584 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 CCDC125Q86Z20 511 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 CACTINQ8WUQ7 758 aaKnown RBP13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 PCIF1Q9H4Z3 704 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 STIM2Q9P246 746 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 PYCARDQ9ULZ3 195 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 CHGBP05060 677 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 SLC15A2Q16348 729 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 RUFY4Q6ZNE9 571 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 FAM167AQ96KS9 214 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 NDST4Q9H3R1 872 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 ANAPC4Q9UJX5 808 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 GPR75-ASB3A0A0A6YYF3 556 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 SURF1Q15526 300 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 SERPINA10Q9UK55 444 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 PCDHB4Q9Y5E5 795 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 BCL9O00512 1426 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 U2AF2P26368 475 aaKnown RBP eCLIP13.37□□□□□ -0.272e-7■■□□□ 12.5
CYFIP1-207ENST00000617556 SFNP31947 248 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 ZNF543Q08ER8 600 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 CCDC170Q8IYT3 715 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 GRK7Q8WTQ7 553 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 SPON1Q9HCB6 807 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 GCNT4Q9P109 453 aa13.37□□□□□ -0.27
CYFIP1-207ENST00000617556 BRD3Q15059 726 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 GABPB2Q8TAK5 448 aaPredicted RBP13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 TCP11Q8WWU5 503 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 PANX2Q96RD6 677 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 MAP3K14Q99558 947 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 PHF20Q9BVI0 1012 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 COPB2P35606 906 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 PROM2Q8N271 834 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 RPS6KC1Q96S38 1066 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 RIOK1Q9BRS2 568 aaKnown RBP13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 MXD3Q9BW11 206 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 NACA2Q9H009 215 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 CD2APQ9Y5K6 639 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 MYOM1P52179 1685 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 KRIT1O00522 736 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 GYS1P13807 737 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 ANTXR2P58335 489 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 RASSF7Q02833 373 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 KRT31Q15323 416 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 SLFN12LQ6IEE8 588 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 CPLX4Q7Z7G2 160 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 CCDC89Q8N998 374 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 MCPH1Q8NEM0 835 aa13.36□□□□□ -0.27
CYFIP1-207ENST00000617556 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms