RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 TUT1Q9H6E5 874 aaKnown RBP20.51■□□□□ 0.87
SSBP1-215ENST00000612337 BCAS3Q9H6U6 928 aa20.51■□□□□ 0.87
SSBP1-215ENST00000612337 EMSYQ7Z589 1322 aa20.51■□□□□ 0.87
SSBP1-215ENST00000612337 C17orf102A2RUQ5 167 aa20.5■□□□□ 0.87
SSBP1-215ENST00000612337 PIK3CDO00329 1044 aa20.5■□□□□ 0.87
SSBP1-215ENST00000612337 NOP56O00567 594 aaKnown RBP20.5■□□□□ 0.87
SSBP1-215ENST00000612337 FIBPO43427 364 aa20.5■□□□□ 0.87
SSBP1-215ENST00000612337 MCM5P33992 734 aa20.5■□□□□ 0.87
SSBP1-215ENST00000612337 GNAQP50148 359 aa20.5■□□□□ 0.87
SSBP1-215ENST00000612337 SEMA3FQ13275 785 aa20.5■□□□□ 0.87
SSBP1-215ENST00000612337 USP17L6PQ6QN14 398 aa20.5■□□□□ 0.87
SSBP1-215ENST00000612337 CYFIP1Q7L576 1253 aa20.5■□□□□ 0.87
SSBP1-215ENST00000612337 TMCO2Q7Z6W1 182 aaPredicted RBP20.5■□□□□ 0.87
SSBP1-215ENST00000612337 SMARCC2Q8TAQ2 1214 aa20.5■□□□□ 0.87
SSBP1-215ENST00000612337 ADAMTS19Q8TE59 1207 aa20.5■□□□□ 0.87
SSBP1-215ENST00000612337 CUL5Q93034 780 aa20.5■□□□□ 0.87
SSBP1-215ENST00000612337 TMEM87BQ96K49 555 aa20.5■□□□□ 0.87
SSBP1-215ENST00000612337 ZBED2Q9BTP6 218 aa20.5■□□□□ 0.87
SSBP1-215ENST00000612337 USP26Q9BXU7 913 aa20.5■□□□□ 0.87
SSBP1-215ENST00000612337 SEC63Q9UGP8 760 aaKnown RBP20.5■□□□□ 0.87
SSBP1-215ENST00000612337 LCHNA4D1U4 455 aa20.49■□□□□ 0.87
SSBP1-215ENST00000612337 SH2B2O14492 632 aaPredicted RBP20.49■□□□□ 0.87
SSBP1-215ENST00000612337 MEIS2O14770 477 aa20.49■□□□□ 0.87
SSBP1-215ENST00000612337 LGR5O75473 907 aa20.49■□□□□ 0.87
SSBP1-215ENST00000612337 GJB5O95377 273 aa20.49■□□□□ 0.87
SSBP1-215ENST00000612337 SMIM10L2AP0DMW4 78 aa20.49■□□□□ 0.87
SSBP1-215ENST00000612337 SMIM10L2BP0DMW5 78 aa20.49■□□□□ 0.87
SSBP1-215ENST00000612337 THPOP40225 353 aa20.49■□□□□ 0.87
SSBP1-215ENST00000612337 PCNX4Q63HM2 1172 aa20.49■□□□□ 0.87
SSBP1-215ENST00000612337 XRRA1Q6P2D8 792 aa20.49■□□□□ 0.87
SSBP1-215ENST00000612337 IL27Q8NEV9 243 aa20.49■□□□□ 0.87
SSBP1-215ENST00000612337 ATP6V0A1Q93050 837 aa20.49■□□□□ 0.87
SSBP1-215ENST00000612337 RAD9AQ99638 391 aa20.49■□□□□ 0.87
SSBP1-215ENST00000612337 RTEL1Q9NZ71 1219 aa20.49■□□□□ 0.87
SSBP1-215ENST00000612337 DOCK5Q9H7D0 1870 aa20.48■□□□□ 0.87
SSBP1-215ENST00000612337 CCDC69A6NI79 296 aa20.48■□□□□ 0.87
SSBP1-215ENST00000612337 RSPH10B2B2RC85 870 aa20.48■□□□□ 0.87
SSBP1-215ENST00000612337 PLEKHA8P1O95397 391 aa20.48■□□□□ 0.87
SSBP1-215ENST00000612337 RSPH10BP0C881 870 aa20.48■□□□□ 0.87
SSBP1-215ENST00000612337 LIFRP42702 1097 aa20.48■□□□□ 0.87
SSBP1-215ENST00000612337 NFXL1Q6ZNB6 911 aa20.48■□□□□ 0.87
SSBP1-215ENST00000612337 SPRED2Q7Z698 418 aa20.48■□□□□ 0.87
SSBP1-215ENST00000612337 SRBD1Q8N5C6 995 aaKnown RBP20.48■□□□□ 0.87
SSBP1-215ENST00000612337 GPR20Q99678 358 aa20.48■□□□□ 0.87
SSBP1-215ENST00000612337 SENP7Q9BQF6 1050 aa20.48■□□□□ 0.87
SSBP1-215ENST00000612337 RNPEPQ9H4A4 650 aa20.48■□□□□ 0.87
SSBP1-215ENST00000612337 SLC27A2O14975 620 aa20.47■□□□□ 0.87
SSBP1-215ENST00000612337 TREHO43280 583 aa20.47■□□□□ 0.87
SSBP1-215ENST00000612337 LPXNO60711 386 aa20.47■□□□□ 0.87
SSBP1-215ENST00000612337 GRB10Q13322 594 aa20.47■□□□□ 0.87
SSBP1-215ENST00000612337 SKIV2LQ15477 1246 aaKnown RBP20.47■□□□□ 0.87
SSBP1-215ENST00000612337 AAK1Q2M2I8 961 aa20.47■□□□□ 0.87
SSBP1-215ENST00000612337 KRT40Q6A162 431 aa20.47■□□□□ 0.87
SSBP1-215ENST00000612337 UHRF1Q96T88 793 aaPredicted RBP20.47■□□□□ 0.87
SSBP1-215ENST00000612337 ESYT1Q9BSJ8 1104 aa20.47■□□□□ 0.87
SSBP1-215ENST00000612337 COL4A4P53420 1690 aaPredicted RBP20.46■□□□□ 0.87
SSBP1-215ENST00000612337 CAND2O75155 1236 aa20.46■□□□□ 0.87
SSBP1-215ENST00000612337 CALM1P0DP23 149 aa20.46■□□□□ 0.87
SSBP1-215ENST00000612337 CALM2P0DP24 149 aa20.46■□□□□ 0.87
SSBP1-215ENST00000612337 CALM3P0DP25 149 aa20.46■□□□□ 0.87
SSBP1-215ENST00000612337 GNAT1P11488 350 aa20.46■□□□□ 0.87
SSBP1-215ENST00000612337 COL9A3Q14050 684 aaPredicted RBP20.46■□□□□ 0.87
SSBP1-215ENST00000612337 NECTIN1Q15223 517 aa20.46■□□□□ 0.87
SSBP1-215ENST00000612337 CREB3L3Q68CJ9 461 aa20.46■□□□□ 0.87
SSBP1-215ENST00000612337 NLRX1Q86UT6 975 aa20.46■□□□□ 0.87
SSBP1-215ENST00000612337 DBF4BQ8NFT6 615 aa20.46■□□□□ 0.87
SSBP1-215ENST00000612337 ZNF215Q9UL58 517 aaPredicted RBP20.46■□□□□ 0.87
SSBP1-215ENST00000612337 MICAL3Q7RTP6 2002 aa20.46■□□□□ 0.87
SSBP1-215ENST00000612337 RXRAP19793 462 aa20.45■□□□□ 0.86
SSBP1-215ENST00000612337 TFF2Q03403 129 aa20.45■□□□□ 0.86
SSBP1-215ENST00000612337 MKRN4PQ13434 485 aaPredicted RBP20.45■□□□□ 0.86
SSBP1-215ENST00000612337 PLEKHG4Q58EX7 1191 aa20.45■□□□□ 0.86
SSBP1-215ENST00000612337 CMTR1Q8N1G2 835 aaKnown RBP20.45■□□□□ 0.86
SSBP1-215ENST00000612337 GIMAP8Q8ND71 665 aaPredicted RBP20.45■□□□□ 0.86
SSBP1-215ENST00000612337 PSTPIP2Q9H939 334 aa20.45■□□□□ 0.86
SSBP1-215ENST00000612337 COG5Q9UP83 839 aa20.45■□□□□ 0.86
SSBP1-215ENST00000612337 SLC12A7Q9Y666 1083 aa20.45■□□□□ 0.86
SSBP1-215ENST00000612337 LINC01553A4QN01 128 aa20.44■□□□□ 0.86
SSBP1-215ENST00000612337 BMP1P13497 986 aa20.44■□□□□ 0.86
SSBP1-215ENST00000612337 ERVK-21P61565 698 aa20.44■□□□□ 0.86
SSBP1-215ENST00000612337 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.44■□□□□ 0.866e-8■■■■■ 39.5
SSBP1-215ENST00000612337 TRIM50Q86XT4 487 aa20.44■□□□□ 0.86
SSBP1-215ENST00000612337 GPRASP2Q96D09 838 aa20.44■□□□□ 0.86
SSBP1-215ENST00000612337 TGS1Q96RS0 853 aaKnown RBP20.44■□□□□ 0.86
SSBP1-215ENST00000612337 SETD4Q9NVD3 440 aa20.44■□□□□ 0.86
SSBP1-215ENST00000612337 LMCD1Q9NZU5 365 aa20.44■□□□□ 0.86
SSBP1-215ENST00000612337 TELO2Q9Y4R8 837 aa20.44■□□□□ 0.86
SSBP1-215ENST00000612337 TCF20Q9UGU0 1960 aaKnown RBP20.43■□□□□ 0.86
SSBP1-215ENST00000612337 RBAK-RBAKDNI3L0D1 243 aa20.43■□□□□ 0.86
SSBP1-215ENST00000612337 AMHP03971 560 aa20.43■□□□□ 0.86
SSBP1-215ENST00000612337 UTP14CQ5TAP6 766 aaKnown RBP20.43■□□□□ 0.86
SSBP1-215ENST00000612337 FAM117BQ6P1L5 589 aa20.43■□□□□ 0.86
SSBP1-215ENST00000612337 SGMS1Q86VZ5 419 aa20.43■□□□□ 0.86
SSBP1-215ENST00000612337 GDPD5Q8WTR4 605 aa20.43■□□□□ 0.86
SSBP1-215ENST00000612337 CDHR1Q96JP9 859 aa20.43■□□□□ 0.86
SSBP1-215ENST00000612337 ANO2Q9NQ90 1003 aa20.43■□□□□ 0.86
SSBP1-215ENST00000612337 INSL6Q9Y581 213 aa20.43■□□□□ 0.86
SSBP1-215ENST00000612337 KAT6AQ92794 2004 aa20.43■□□□□ 0.86
SSBP1-215ENST00000612337 SIP14410 1827 aa20.42■□□□□ 0.86
SSBP1-215ENST00000612337 KCNA2P16389 499 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms