RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 ESYT2A0FGR8 921 aa25.55■■□□□ 1.68
GTF2F1-204ENST00000594965 SEC24BO95487 1268 aa25.55■■□□□ 1.68
GTF2F1-204ENST00000594965 FOSP01100 380 aaPredicted RBP25.55■■□□□ 1.68
GTF2F1-204ENST00000594965 LGALS2P05162 132 aa25.55■■□□□ 1.68
GTF2F1-204ENST00000594965 HIC1Q14526 733 aa25.55■■□□□ 1.68
GTF2F1-204ENST00000594965 RASIP1Q5U651 963 aa25.55■■□□□ 1.68
GTF2F1-204ENST00000594965 ZNF365Q70YC5 407 aa25.55■■□□□ 1.68
GTF2F1-204ENST00000594965 Q7L0L9 218 aa25.55■■□□□ 1.68
GTF2F1-204ENST00000594965 IL17RAQ96F46 866 aa25.55■■□□□ 1.68
GTF2F1-204ENST00000594965 SLC26A6Q9BXS9 759 aa25.55■■□□□ 1.68
GTF2F1-204ENST00000594965 ZMYND12Q9H0C1 365 aa25.55■■□□□ 1.68
GTF2F1-204ENST00000594965 GLT8D2Q9H1C3 349 aa25.55■■□□□ 1.68
GTF2F1-204ENST00000594965 EHMT1Q9H9B1 1298 aa25.55■■□□□ 1.68
GTF2F1-204ENST00000594965 ANAPC15P60006 121 aa25.54■■□□□ 1.68
GTF2F1-204ENST00000594965 AP3B2Q13367 1082 aa25.54■■□□□ 1.68
GTF2F1-204ENST00000594965 CYP2W1Q8TAV3 490 aa25.54■■□□□ 1.68
GTF2F1-204ENST00000594965 TET1Q8NFU7 2136 aa25.54■■□□□ 1.68
GTF2F1-204ENST00000594965 KAT6AQ92794 2004 aa25.53■■□□□ 1.68
GTF2F1-204ENST00000594965 NOP56O00567 594 aaKnown RBP25.53■■□□□ 1.68
GTF2F1-204ENST00000594965 SREBF1P36956 1147 aa25.53■■□□□ 1.68
GTF2F1-204ENST00000594965 MTMR1Q13613 665 aa25.53■■□□□ 1.68
GTF2F1-204ENST00000594965 JAKMIP3Q5VZ66 844 aa25.53■■□□□ 1.68
GTF2F1-204ENST00000594965 PSRC1Q6PGN9 363 aaPredicted RBP25.53■■□□□ 1.68
GTF2F1-204ENST00000594965 C7orf31Q8N865 590 aa25.53■■□□□ 1.68
GTF2F1-204ENST00000594965 DHX38Q92620 1227 aaKnown RBP25.53■■□□□ 1.68
GTF2F1-204ENST00000594965 CDHR1Q96JP9 859 aa25.53■■□□□ 1.68
GTF2F1-204ENST00000594965 MXRA8Q9BRK3 442 aa25.53■■□□□ 1.68
GTF2F1-204ENST00000594965 H3BRB1 525 aa25.52■■□□□ 1.68
GTF2F1-204ENST00000594965 PITPNM1O00562 1244 aa25.52■■□□□ 1.68
GTF2F1-204ENST00000594965 SMAD3P84022 425 aaKnown RBP25.52■■□□□ 1.68
GTF2F1-204ENST00000594965 ZNF200P98182 395 aaPredicted RBP25.52■■□□□ 1.68
GTF2F1-204ENST00000594965 AKAP17AQ02040 695 aaKnown RBP25.52■■□□□ 1.68
GTF2F1-204ENST00000594965 GIMAP8Q8ND71 665 aaPredicted RBP25.52■■□□□ 1.68
GTF2F1-204ENST00000594965 CRYGNQ8WXF5 182 aa25.52■■□□□ 1.68
GTF2F1-204ENST00000594965 TUT1Q9H6E5 874 aaKnown RBP25.52■■□□□ 1.68
GTF2F1-204ENST00000594965 PKD2L1Q9P0L9 805 aa25.52■■□□□ 1.68
GTF2F1-204ENST00000594965 NOD1Q9Y239 953 aa25.52■■□□□ 1.68
GTF2F1-204ENST00000594965 MAFGO15525 162 aa25.51■■□□□ 1.67
GTF2F1-204ENST00000594965 IQCF3P0C7M6 154 aa25.51■■□□□ 1.67
GTF2F1-204ENST00000594965 SP4Q02446 784 aa25.51■■□□□ 1.67
GTF2F1-204ENST00000594965 STK3Q13188 491 aa25.51■■□□□ 1.67
GTF2F1-204ENST00000594965 DEFB123Q8N688 67 aa25.51■■□□□ 1.67
GTF2F1-204ENST00000594965 HERVK_113Q902F9 699 aa25.51■■□□□ 1.67
GTF2F1-204ENST00000594965 C6orf50Q9HD87 102 aa25.51■■□□□ 1.67
GTF2F1-204ENST00000594965 KCNH7Q9NS40 1196 aa25.51■■□□□ 1.67
GTF2F1-204ENST00000594965 VPS54Q9P1Q0 977 aa25.51■■□□□ 1.67
GTF2F1-204ENST00000594965 ARP10275 920 aa25.5■■□□□ 1.67
GTF2F1-204ENST00000594965 BFSP2Q13515 415 aa25.5■■□□□ 1.67
GTF2F1-204ENST00000594965 FAM109BQ6ICB4 259 aaPredicted RBP25.5■■□□□ 1.67
GTF2F1-204ENST00000594965 TRIM50Q86XT4 487 aa25.5■■□□□ 1.67
GTF2F1-204ENST00000594965 CCDC12Q8WUD4 166 aaPredicted RBP25.5■■□□□ 1.67
GTF2F1-204ENST00000594965 WNT8BQ93098 351 aa25.5■■□□□ 1.67
GTF2F1-204ENST00000594965 CXXC1Q9P0U4 656 aaPredicted RBP25.5■■□□□ 1.67
GTF2F1-204ENST00000594965 TPCN1Q9ULQ1 816 aa25.5■■□□□ 1.67
GTF2F1-204ENST00000594965 GSTTP1A0A1W2PQM5 241 aa25.49■■□□□ 1.67
GTF2F1-204ENST00000594965 FGBP02675 491 aa25.49■■□□□ 1.67
GTF2F1-204ENST00000594965 HOXC8P31273 242 aa25.49■■□□□ 1.67
GTF2F1-204ENST00000594965 ARHGAP4P98171 946 aa25.49■■□□□ 1.67
GTF2F1-204ENST00000594965 SCRN1Q12765 414 aa25.49■■□□□ 1.67
GTF2F1-204ENST00000594965 CEP55Q53EZ4 464 aa25.49■■□□□ 1.67
GTF2F1-204ENST00000594965 CAGE1Q8TC20 777 aa25.49■■□□□ 1.67
GTF2F1-204ENST00000594965 MEIS1O00470 390 aa25.48■■□□□ 1.67
GTF2F1-204ENST00000594965 GNA11P29992 359 aa25.48■■□□□ 1.67
GTF2F1-204ENST00000594965 SSRP1Q08945 709 aaKnown RBP25.48■■□□□ 1.67
GTF2F1-204ENST00000594965 RBL2Q08999 1139 aa25.48■■□□□ 1.67
GTF2F1-204ENST00000594965 TRIM71Q2Q1W2 868 aaKnown RBP25.48■■□□□ 1.67
GTF2F1-204ENST00000594965 UTP14CQ5TAP6 766 aaKnown RBP25.48■■□□□ 1.67
GTF2F1-204ENST00000594965 RPUSD2Q8IZ73 545 aaKnown RBP25.48■■□□□ 1.67
GTF2F1-204ENST00000594965 REXO1Q8N1G1 1221 aaKnown RBP25.48■■□□□ 1.67
GTF2F1-204ENST00000594965 RETREG2Q8NC44 543 aa25.48■■□□□ 1.67
GTF2F1-204ENST00000594965 RASGRP4Q8TDF6 673 aa25.48■■□□□ 1.67
GTF2F1-204ENST00000594965 MTMR10Q9NXD2 777 aa25.48■■□□□ 1.67
GTF2F1-204ENST00000594965 LAMA2P24043 3122 aaKnown RBP25.48■■□□□ 1.67
GTF2F1-204ENST00000594965 PTPRSQ13332 1948 aa25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 CYP3A4P08684 503 aa25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 SMIM10L2AP0DMW4 78 aa25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 SMIM10L2BP0DMW5 78 aa25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 TCF7P36402 384 aaPredicted RBP25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 AK2P54819 239 aa25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 PTK7Q13308 1070 aa25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 GPNMBQ14956 572 aa25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 OTOP2Q7RTS6 562 aa25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 DEFB128Q7Z7B8 93 aa25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 TRIM22Q8IYM9 498 aa25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 SEPT1Q8WYJ6 367 aa25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 RNPEPQ9H4A4 650 aa25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 AGO4Q9HCK5 861 aaKnown RBP25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 SH3GLB2Q9NR46 395 aa25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 WDR81Q562E7 1941 aa25.47■■□□□ 1.67
GTF2F1-204ENST00000594965 GRXCR1A8MXD5 290 aa25.46■■□□□ 1.67
GTF2F1-204ENST00000594965 FAM86B1E9PN63 330 aa25.46■■□□□ 1.67
GTF2F1-204ENST00000594965 CPLX1O14810 134 aa25.46■■□□□ 1.67
GTF2F1-204ENST00000594965 DEXIO95424 95 aa25.46■■□□□ 1.67
GTF2F1-204ENST00000594965 FAM86B2P0C5J1 330 aa25.46■■□□□ 1.67
GTF2F1-204ENST00000594965 RFC2P35250 354 aa25.46■■□□□ 1.67
GTF2F1-204ENST00000594965 ITGB3BPQ13352 177 aaPredicted RBP25.46■■□□□ 1.67
GTF2F1-204ENST00000594965 TRAF7Q6Q0C0 670 aa25.46■■□□□ 1.67
GTF2F1-204ENST00000594965 CCDC155Q8N6L0 562 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms