RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 MYOCDQ8IZQ8 938 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 SAMD3Q8N6K7 520 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 CUL5Q93034 780 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 C16orf70Q9BSU1 422 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 SEC63Q9UGP8 760 aaKnown RBP15.83■□□□□ 0.12
HDAC5-208ENST00000588419 RBM8AQ9Y5S9 174 aaKnown RBP15.83■□□□□ 0.12
HDAC5-208ENST00000588419 ATG2AQ2TAZ0 1938 aa15.82■□□□□ 0.12
HDAC5-208ENST00000588419 RSPH10B2B2RC85 870 aa15.82■□□□□ 0.12
HDAC5-208ENST00000588419 H3BRB1 525 aa15.82■□□□□ 0.12
HDAC5-208ENST00000588419 GJB5O95377 273 aa15.82■□□□□ 0.12
HDAC5-208ENST00000588419 RSPH10BP0C881 870 aa15.82■□□□□ 0.12
HDAC5-208ENST00000588419 HOXD8P13378 290 aaPredicted RBP15.82■□□□□ 0.12
HDAC5-208ENST00000588419 RXRAP19793 462 aa15.82■□□□□ 0.12
HDAC5-208ENST00000588419 COL9A1P20849 921 aa15.82■□□□□ 0.12
HDAC5-208ENST00000588419 TRAF7Q6Q0C0 670 aa15.82■□□□□ 0.12
HDAC5-208ENST00000588419 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.82■□□□□ 0.12
HDAC5-208ENST00000588419 MB21D2Q8IYB1 491 aaPredicted RBP15.82■□□□□ 0.12
HDAC5-208ENST00000588419 RRP36Q96EU6 259 aaKnown RBP15.82■□□□□ 0.12
HDAC5-208ENST00000588419 TUT1Q9H6E5 874 aaKnown RBP15.82■□□□□ 0.12
HDAC5-208ENST00000588419 LINC01553A4QN01 128 aa15.81■□□□□ 0.12
HDAC5-208ENST00000588419 TREHO43280 583 aa15.81■□□□□ 0.12
HDAC5-208ENST00000588419 PRC1O43663 620 aa15.81■□□□□ 0.12
HDAC5-208ENST00000588419 EFCAB14O75071 495 aa15.81■□□□□ 0.12
HDAC5-208ENST00000588419 AMHP03971 560 aa15.81■□□□□ 0.12
HDAC5-208ENST00000588419 TGFB3P10600 412 aa15.81■□□□□ 0.12
HDAC5-208ENST00000588419 MRPS9P82933 396 aaKnown RBP15.81■□□□□ 0.12
HDAC5-208ENST00000588419 USP17L6PQ6QN14 398 aa15.81■□□□□ 0.12
HDAC5-208ENST00000588419 EMSYQ7Z589 1322 aa15.81■□□□□ 0.12
HDAC5-208ENST00000588419 SERINC5Q86VE9 423 aa15.81■□□□□ 0.12
HDAC5-208ENST00000588419 CMTR1Q8N1G2 835 aaKnown RBP15.81■□□□□ 0.12
HDAC5-208ENST00000588419 DBF4BQ8NFT6 615 aa15.81■□□□□ 0.12
HDAC5-208ENST00000588419 TGS1Q96RS0 853 aaKnown RBP15.81■□□□□ 0.12
HDAC5-208ENST00000588419 RAD9AQ99638 391 aa15.81■□□□□ 0.12
HDAC5-208ENST00000588419 LY9Q9HBG7 655 aa15.81■□□□□ 0.12
HDAC5-208ENST00000588419 RAPGEFL1Q9UHV5 662 aa15.81■□□□□ 0.12
HDAC5-208ENST00000588419 FRMPD4Q14CM0 1322 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 CCDC69A6NI79 296 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 FIBPO43427 364 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 LPXNO60711 386 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 DDAH1O94760 285 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 UPP2O95045 317 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 PLEKHA8P1O95397 391 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 BMP1P13497 986 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 POU3F3P20264 500 aaPredicted RBP15.8■□□□□ 0.12
HDAC5-208ENST00000588419 KIF5BP33176 963 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 ARHGAP4P98171 946 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 SEMA3FQ13275 785 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 NEDD9Q14511 834 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 METTL7BQ6UX53 244 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 IGDCC4Q8TDY8 1250 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 HLA-CQ95604 372 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 SETD4Q9NVD3 440 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 PKD2L1Q9P0L9 805 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 ZNF215Q9UL58 517 aaPredicted RBP15.8■□□□□ 0.12
HDAC5-208ENST00000588419 COG5Q9UP83 839 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 TELO2Q9Y4R8 837 aa15.8■□□□□ 0.12
HDAC5-208ENST00000588419 hCG_1642624A0A1W2PR95 340 aa15.79■□□□□ 0.12
HDAC5-208ENST00000588419 INPP4AQ96PE3 977 aaPredicted RBP15.79■□□□□ 0.12
HDAC5-208ENST00000588419 GPR20Q99678 358 aa15.79■□□□□ 0.12
HDAC5-208ENST00000588419 C17orf80Q9BSJ5 609 aa15.79■□□□□ 0.12
HDAC5-208ENST00000588419 SPZ1Q9BXG8 430 aa15.79■□□□□ 0.12
HDAC5-208ENST00000588419 USP26Q9BXU7 913 aa15.79■□□□□ 0.12
HDAC5-208ENST00000588419 LRRC2Q9BYS8 371 aa15.79■□□□□ 0.12
HDAC5-208ENST00000588419 RNPEPQ9H4A4 650 aa15.79■□□□□ 0.12
HDAC5-208ENST00000588419 SUGCTQ9HAC7 445 aa15.79■□□□□ 0.12
HDAC5-208ENST00000588419 TRANK1O15050 2925 aa15.79■□□□□ 0.12
HDAC5-208ENST00000588419 MUC3AQ02505 3323 aa15.79■□□□□ 0.12
HDAC5-208ENST00000588419 BRWD1Q9NSI6 2320 aa15.78■□□□□ 0.12
HDAC5-208ENST00000588419 KIAA1671Q9BY89 1806 aa15.78■□□□□ 0.12
HDAC5-208ENST00000588419 SPATA31C2B4DYI2 1134 aa15.78■□□□□ 0.12
HDAC5-208ENST00000588419 STAM2O75886 525 aa15.78■□□□□ 0.12
HDAC5-208ENST00000588419 ICAM3P32942 547 aa15.78■□□□□ 0.12
HDAC5-208ENST00000588419 UBE2SQ16763 222 aa15.78■□□□□ 0.12
HDAC5-208ENST00000588419 NLRX1Q86UT6 975 aa15.78■□□□□ 0.12
HDAC5-208ENST00000588419 CCDC82Q8N4S0 544 aa15.78■□□□□ 0.12
HDAC5-208ENST00000588419 FBXO22Q8NEZ5 403 aa15.78■□□□□ 0.12
HDAC5-208ENST00000588419 SEPT8Q92599 483 aa15.78■□□□□ 0.12
HDAC5-208ENST00000588419 MAP4K1Q92918 833 aa15.78■□□□□ 0.12
HDAC5-208ENST00000588419 YME1L1Q96TA2 773 aa15.78■□□□□ 0.12
HDAC5-208ENST00000588419 NCOR1O75376 2440 aa15.77■□□□□ 0.12
HDAC5-208ENST00000588419 SH2B2O14492 632 aaPredicted RBP15.77■□□□□ 0.12
HDAC5-208ENST00000588419 GNAT1P11488 350 aa15.77■□□□□ 0.12
HDAC5-208ENST00000588419 MARK3P27448 753 aa15.77■□□□□ 0.12
HDAC5-208ENST00000588419 MCM5P33992 734 aa15.77■□□□□ 0.12
HDAC5-208ENST00000588419 ERVK-21P61565 698 aa15.77■□□□□ 0.12
HDAC5-208ENST00000588419 PLEKHG4Q58EX7 1191 aa15.77■□□□□ 0.12
HDAC5-208ENST00000588419 PCNX4Q63HM2 1172 aa15.77■□□□□ 0.12
HDAC5-208ENST00000588419 OSBPL7Q9BZF2 842 aa15.77■□□□□ 0.12
HDAC5-208ENST00000588419 INSL6Q9Y581 213 aa15.77■□□□□ 0.12
HDAC5-208ENST00000588419 XIRP2A4UGR9 3374 aa15.76■□□□□ 0.11
HDAC5-208ENST00000588419 MEIS2O14770 477 aa15.76■□□□□ 0.11
HDAC5-208ENST00000588419 TCF7P36402 384 aaPredicted RBP15.76■□□□□ 0.11
HDAC5-208ENST00000588419 GNAQP50148 359 aa15.76■□□□□ 0.11
HDAC5-208ENST00000588419 MICU3Q86XE3 530 aa15.76■□□□□ 0.11
HDAC5-208ENST00000588419 SRBD1Q8N5C6 995 aaKnown RBP15.76■□□□□ 0.11
HDAC5-208ENST00000588419 LMBR1Q8WVP7 490 aa15.76■□□□□ 0.11
HDAC5-208ENST00000588419 ANO2Q9NQ90 1003 aa15.76■□□□□ 0.11
HDAC5-208ENST00000588419 SPDYE3A6NKU9 549 aa15.75■□□□□ 0.11
HDAC5-208ENST00000588419 SLC27A2O14975 620 aa15.75■□□□□ 0.11
HDAC5-208ENST00000588419 CSPG5O95196 566 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms