RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 NOP56O00567 594 aaKnown RBP15.07■□□□□ 0
ERBB2-220ENST00000584684 PRPF3O43395 683 aaKnown RBP15.07■□□□□ 0
ERBB2-220ENST00000584684 LGALS2P05162 132 aa15.07■□□□□ 0
ERBB2-220ENST00000584684 KCNA2P16389 499 aa15.07■□□□□ 0
ERBB2-220ENST00000584684 NTRK3Q16288 839 aa15.07■□□□□ 0
ERBB2-220ENST00000584684 CYFIP1Q7L576 1253 aa15.07■□□□□ 0
ERBB2-220ENST00000584684 CCDC12Q8WUD4 166 aaPredicted RBP15.07■□□□□ 0
ERBB2-220ENST00000584684 GPR20Q99678 358 aa15.07■□□□□ 0
ERBB2-220ENST00000584684 RNF26Q9BY78 433 aaPredicted RBP15.07■□□□□ 0
ERBB2-220ENST00000584684 HDAC6Q9UBN7 1215 aa15.07■□□□□ 0
ERBB2-220ENST00000584684 NAP1L2Q9ULW6 460 aaPredicted RBP15.07■□□□□ 0
ERBB2-220ENST00000584684 STXBP5LQ9Y2K9 1186 aa15.07■□□□□ 0
ERBB2-220ENST00000584684 CYP46A1Q9Y6A2 500 aa15.07■□□□□ 0
ERBB2-220ENST00000584684 H3BRB1 525 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 PARNO95453 639 aaKnown RBP15.06■□□□□ 0
ERBB2-220ENST00000584684 FGBP02675 491 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 ACRP10323 421 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 IFNAR1P17181 557 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 PDIA3P30101 505 aaKnown RBP15.06■□□□□ 0
ERBB2-220ENST00000584684 SREBF1P36956 1147 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 PTK7Q13308 1070 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 MTMR1Q13613 665 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 TOB2Q14106 344 aaPredicted RBP15.06■□□□□ 0
ERBB2-220ENST00000584684 PKN1Q16512 942 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 MCTP2Q6DN12 878 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 RETREG2Q8NC44 543 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 PPP1R13LQ8WUF5 828 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 DHX38Q92620 1227 aaKnown RBP15.06■□□□□ 0
ERBB2-220ENST00000584684 SCLYQ96I15 445 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 ANO3Q9BYT9 981 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 ZMYND12Q9H0C1 365 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 TUT1Q9H6E5 874 aaKnown RBP15.06■□□□□ 0
ERBB2-220ENST00000584684 BCAS3Q9H6U6 928 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 JADE2Q9NQC1 790 aa15.06■□□□□ 0
ERBB2-220ENST00000584684 TRIP12Q14669 1992 aaPredicted RBP15.05■□□□□ 0
ERBB2-220ENST00000584684 SMCO2A6NFE2 343 aa15.05■□□□□ -0
ERBB2-220ENST00000584684 SORBS3O60504 671 aa15.05■□□□□ -0
ERBB2-220ENST00000584684 IQCF3P0C7M6 154 aa15.05■□□□□ -0
ERBB2-220ENST00000584684 DNAJB2P25686 324 aa15.05■□□□□ -0
ERBB2-220ENST00000584684 CHMP4BP1P59074 171 aa15.05■□□□□ -0
ERBB2-220ENST00000584684 ANAPC15P60006 121 aa15.05■□□□□ -0
ERBB2-220ENST00000584684 CRYGNQ8WXF5 182 aa15.05■□□□□ -0
ERBB2-220ENST00000584684 IL17RAQ96F46 866 aa15.05■□□□□ -0
ERBB2-220ENST00000584684 ZNF274Q96GC6 653 aaPredicted RBP15.05■□□□□ -0
ERBB2-220ENST00000584684 GUCD1Q96NT3 240 aa15.05■□□□□ -0
ERBB2-220ENST00000584684 ALG1Q9BT22 464 aa15.05■□□□□ -0
ERBB2-220ENST00000584684 ZNF215Q9UL58 517 aaPredicted RBP15.05■□□□□ -0
ERBB2-220ENST00000584684 GBF1Q92538 1859 aa15.04■□□□□ -0
ERBB2-220ENST00000584684 EIF5BO60841 1220 aaKnown RBP15.04■□□□□ -0
ERBB2-220ENST00000584684 SELPP16109 830 aa15.04■□□□□ -0
ERBB2-220ENST00000584684 TRIM71Q2Q1W2 868 aaKnown RBP15.04■□□□□ -0
ERBB2-220ENST00000584684 LRRC8DQ7L1W4 858 aa15.04■□□□□ -0
ERBB2-220ENST00000584684 NIPA1Q7RTP0 329 aa15.04■□□□□ -0
ERBB2-220ENST00000584684 SERINC5Q86VE9 423 aa15.04■□□□□ -0
ERBB2-220ENST00000584684 MXRA8Q9BRK3 442 aa15.04■□□□□ -0
ERBB2-220ENST00000584684 UPF3BQ9BZI7 483 aaKnown RBP15.04■□□□□ -0
ERBB2-220ENST00000584684 TTYH1Q9H313 450 aaPredicted RBP15.04■□□□□ -0
ERBB2-220ENST00000584684 CXXC1Q9P0U4 656 aaPredicted RBP15.04■□□□□ -0
ERBB2-220ENST00000584684 CHD7Q9P2D1 2997 aa15.04■□□□□ -0
ERBB2-220ENST00000584684 TET1Q8NFU7 2136 aa15.04■□□□□ -0
ERBB2-220ENST00000584684 NFASCO94856 1347 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 EMSYQ7Z589 1322 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 ATP9AO75110 1047 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 SMIM10L2AP0DMW4 78 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 SMIM10L2BP0DMW5 78 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 CKBP12277 381 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 HIC1Q14526 733 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 CEP55Q53EZ4 464 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 OTOP2Q7RTS6 562 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 FAM177A1Q8N128 213 aaPredicted RBP15.03■□□□□ -0
ERBB2-220ENST00000584684 REXO1Q8N1G1 1221 aaKnown RBP15.03■□□□□ -0
ERBB2-220ENST00000584684 CCDC148Q8NFR7 591 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 PHKBQ93100 1093 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 SEMA6BQ9H3T3 888 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 C6orf50Q9HD87 102 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 SH3GLB2Q9NR46 395 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 KCNH7Q9NS40 1196 aa15.03■□□□□ -0
ERBB2-220ENST00000584684 C17orf102A2RUQ5 167 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 MEIS1O00470 390 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 CAND2O75155 1236 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 BAIAP3O94812 1187 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 CXCL10P02778 98 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 CYP3A4P08684 503 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 ACTN1P12814 892 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 GNA11P29992 359 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 TCF7P36402 384 aaPredicted RBP15.02■□□□□ -0
ERBB2-220ENST00000584684 ARHGAP4P98171 946 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 AKAP17AQ02040 695 aaKnown RBP15.02■□□□□ -0
ERBB2-220ENST00000584684 RAB30Q15771 203 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 TRAF7Q6Q0C0 670 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 TRIM50Q86XT4 487 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 BICD2Q8TD16 824 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 TIFAQ96CG3 184 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 PBX4Q9BYU1 374 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 NCOA5Q9HCD5 579 aaKnown RBP15.02■□□□□ -0
ERBB2-220ENST00000584684 JPH1Q9HDC5 661 aaPredicted RBP15.02■□□□□ -0
ERBB2-220ENST00000584684 TMEM260Q9NX78 707 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 SLC4A7Q9Y6M7 1214 aa15.02■□□□□ -0
ERBB2-220ENST00000584684 TRANK1O15050 2925 aa15.02□□□□□ -0.01
ERBB2-220ENST00000584684 NRCAMQ92823 1304 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms