RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ARMC5Q96C12 935 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 ZNF396Q96N95 335 aaPredicted RBP11.79□□□□□ -0.52
CCDC47-203ENST00000580986 RIT2Q99578 217 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 KCNH7Q9NS40 1196 aa11.79□□□□□ -0.52
CCDC47-203ENST00000580986 IPO5O00410 1097 aaKnown RBP11.78□□□□□ -0.52
CCDC47-203ENST00000580986 ECM2O94769 699 aaPredicted RBP11.78□□□□□ -0.52
CCDC47-203ENST00000580986 TDP2O95551 362 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 YEATS4O95619 227 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 INHAP05111 366 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 ELNP15502 786 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 NASPP49321 788 aaPredicted RBP11.78□□□□□ -0.52
CCDC47-203ENST00000580986 ATP2C1P98194 919 aaPredicted RBP11.78□□□□□ -0.52
CCDC47-203ENST00000580986 SEMA3FQ13275 785 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 NEDD9Q14511 834 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 SLC9C1Q4G0N8 1177 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 DUSP28Q4G0W2 176 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 PRR16Q569H4 304 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 FBXO16Q8IX29 292 aaPredicted RBP11.78□□□□□ -0.52
CCDC47-203ENST00000580986 ZNF710Q8N1W2 664 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 SLC5A5Q92911 643 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 MTMR9Q96QG7 549 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 KRTAP3-3Q9BYR6 98 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 KRTAP3-2Q9BYR7 98 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 WDR11Q9BZH6 1224 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 AGO4Q9HCK5 861 aaKnown RBP11.78□□□□□ -0.52
CCDC47-203ENST00000580986 TBC1D22BQ9NU19 505 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 RTEL1Q9NZ71 1219 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 DDX41Q9UJV9 622 aaKnown RBP11.78□□□□□ -0.52
CCDC47-203ENST00000580986 CFAP45Q9UL16 551 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 FAM184BQ9ULE4 1060 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 MRVI1Q9Y6F6 885 aa11.78□□□□□ -0.52
CCDC47-203ENST00000580986 FRMPD3Q5JV73 1810 aa11.77□□□□□ -0.52
CCDC47-203ENST00000580986 WNT7AO00755 349 aa11.77□□□□□ -0.53
CCDC47-203ENST00000580986 SLC37A4O43826 429 aa11.77□□□□□ -0.53
CCDC47-203ENST00000580986 DUSP11O75319 330 aaKnown RBP11.77□□□□□ -0.53
CCDC47-203ENST00000580986 HOXB3P14651 431 aaPredicted RBP11.77□□□□□ -0.53
CCDC47-203ENST00000580986 KCNA2P16389 499 aa11.77□□□□□ -0.53
CCDC47-203ENST00000580986 MCM7P33993 719 aa11.77□□□□□ -0.53
CCDC47-203ENST00000580986 CCDC144BQ3MJ40 725 aa11.77□□□□□ -0.53
CCDC47-203ENST00000580986 METTL7BQ6UX53 244 aa11.77□□□□□ -0.53
CCDC47-203ENST00000580986 CLEC17AQ6ZS10 378 aa11.77□□□□□ -0.53
CCDC47-203ENST00000580986 EFCAB3Q8N7B9 438 aa11.77□□□□□ -0.53
CCDC47-203ENST00000580986 C4orf32Q8N8J7 132 aa11.77□□□□□ -0.53
CCDC47-203ENST00000580986 CYP2W1Q8TAV3 490 aa11.77□□□□□ -0.53
CCDC47-203ENST00000580986 HMX1Q9NP08 348 aaPredicted RBP11.77□□□□□ -0.53
CCDC47-203ENST00000580986 GNEQ9Y223 722 aaKnown RBP11.77□□□□□ -0.53
CCDC47-203ENST00000580986 PCDHB6Q9Y5E3 794 aa11.77□□□□□ -0.53
CCDC47-203ENST00000580986 MSH4O15457 936 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 PSMD10O75832 226 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 BAG4O95429 457 aaKnown RBP11.76□□□□□ -0.53
CCDC47-203ENST00000580986 OR52Z1P0C646 297 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 ARP10275 920 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 TXNP10599 105 aaKnown RBP11.76□□□□□ -0.53
CCDC47-203ENST00000580986 UBA1P22314 1058 aaKnown RBP11.76□□□□□ -0.53
CCDC47-203ENST00000580986 KRT85P78386 507 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 TNFAIP2Q03169 654 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 SLC39A14Q15043 492 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 PTPAQ15257 358 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 CALCRLQ16602 461 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 ANO1Q5XXA6 986 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 B3GNT9Q6UX72 402 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 SEPT14Q6ZU15 432 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 TRPV1Q8NER1 839 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 RDM1Q8NG50 284 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 HAS1Q92839 578 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 ZNF333Q96JL9 665 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 USP28Q96RU2 1077 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 ZNF577Q9BSK1 485 aa11.76□□□□□ -0.53
CCDC47-203ENST00000580986 SCAND2PQ9GZW5 306 aaPredicted RBP11.76□□□□□ -0.53
CCDC47-203ENST00000580986 PAK6Q9NQU5 681 aaPredicted RBP11.76□□□□□ -0.53
CCDC47-203ENST00000580986 ZHX1Q9UKY1 873 aaPredicted RBP11.76□□□□□ -0.53
CCDC47-203ENST00000580986 DHX15O43143 795 aaKnown RBP11.75□□□□□ -0.53
CCDC47-203ENST00000580986 PPP6R2O75170 966 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 FARP2O94887 1054 aaPredicted RBP11.75□□□□□ -0.53
CCDC47-203ENST00000580986 ARIH2O95376 493 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 GH1P01241 217 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 HOXD8P13378 290 aaPredicted RBP11.75□□□□□ -0.53
CCDC47-203ENST00000580986 CST5P28325 142 aaPredicted RBP11.75□□□□□ -0.53
CCDC47-203ENST00000580986 SFNP31947 248 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 ADCYAP1R1P41586 468 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 KRT76Q01546 638 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 PTGDRQ13258 359 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 ITGB3BPQ13352 177 aaPredicted RBP11.75□□□□□ -0.53
CCDC47-203ENST00000580986 PPP2R5CQ13362 524 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 LAMC2Q13753 1193 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 SF3A1Q15459 793 aaKnown RBP11.75□□□□□ -0.53
CCDC47-203ENST00000580986 CELF3Q5SZQ8 465 aaKnown RBP11.75□□□□□ -0.53
CCDC47-203ENST00000580986 ZNF746Q6NUN9 644 aaPredicted RBP11.75□□□□□ -0.53
CCDC47-203ENST00000580986 EEPD1Q7L9B9 569 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 SMAP1Q8IYB5 467 aaPredicted RBP11.75□□□□□ -0.53
CCDC47-203ENST00000580986 LINC00301Q8NCQ3 95 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 KCNG4Q8TDN1 519 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 FERMT2Q96AC1 680 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 SDF4Q9BRK5 362 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 UPF3AQ9H1J1 476 aaKnown RBP11.75□□□□□ -0.53
CCDC47-203ENST00000580986 PDGFCQ9NRA1 345 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 DDX20Q9UHI6 824 aaKnown RBP11.75□□□□□ -0.53
CCDC47-203ENST00000580986 PCDHA12Q9UN75 941 aa11.75□□□□□ -0.53
CCDC47-203ENST00000580986 DDX49Q9Y6V7 483 aaKnown RBP11.75□□□□□ -0.53
CCDC47-203ENST00000580986 GAS7O60861 476 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms