RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 TAF3Q5VWG9 929 aa19.68■□□□□ 0.74
CMTM3-214ENST00000567572 TRAPPC11Q7Z392 1133 aa19.68■□□□□ 0.74
CMTM3-214ENST00000567572 CCDC84Q86UT8 332 aaPredicted RBP19.68■□□□□ 0.74
CMTM3-214ENST00000567572 FBXO11Q86XK2 927 aa19.68■□□□□ 0.74
CMTM3-214ENST00000567572 RAD54LQ92698 747 aa19.68■□□□□ 0.74
CMTM3-214ENST00000567572 MYH7BA7E2Y1 1941 aa19.68■□□□□ 0.74
CMTM3-214ENST00000567572 MAP2K7O14733 419 aa19.68■□□□□ 0.74
CMTM3-214ENST00000567572 SEC31AO94979 1220 aaKnown RBP19.68■□□□□ 0.74
CMTM3-214ENST00000567572 STAT2P52630 851 aa19.68■□□□□ 0.74
CMTM3-214ENST00000567572 PAPD7Q5XG87 772 aaKnown RBP19.68■□□□□ 0.74
CMTM3-214ENST00000567572 PNMA5Q96PV4 448 aa19.68■□□□□ 0.74
CMTM3-214ENST00000567572 EDEM3Q9BZQ6 932 aa19.68■□□□□ 0.74
CMTM3-214ENST00000567572 VCPKMTQ9H867 229 aa19.68■□□□□ 0.74
CMTM3-214ENST00000567572 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.68■□□□□ 0.74
CMTM3-214ENST00000567572 PRR12Q9ULL5 1215 aa19.68■□□□□ 0.74
CMTM3-214ENST00000567572 KDM3AQ9Y4C1 1321 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 PHF20L1A8MW92 1017 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 USP17L15C9J2P7 530 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 USP17L13C9JLJ4 530 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 USP17L11C9JVI0 530 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 USP17L18D6R9N7 530 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 USP17L22D6RA61 530 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 USP17L17D6RBQ6 530 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 USP17L19D6RCP7 530 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 USP17L20D6RJB6 530 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 MEIS2O14770 477 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 ASNSP08243 561 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 MCM3P25205 808 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 SNAP25P60880 206 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 HERVK_113P62684 666 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 EHHADHQ08426 723 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 USP17L24Q0WX57 530 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 GPS2Q13227 327 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 MAN2A1Q16706 1144 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 USP17L6PQ6QN14 398 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 SH2D4AQ9H788 454 aa19.67■□□□□ 0.74
CMTM3-214ENST00000567572 PUF60Q9UHX1 559 aaKnown RBP19.67■□□□□ 0.74
CMTM3-214ENST00000567572 SASH3O75995 380 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 FCER1AP12319 257 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 CKAP4Q07065 602 aaKnown RBP19.66■□□□□ 0.74
CMTM3-214ENST00000567572 AP3B2Q13367 1082 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 HYIQ5T013 277 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 CCDC122Q5T0U0 273 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 FAM83BQ5T0W9 1011 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 SAMD7Q7Z3H4 446 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 PURBQ96QR8 312 aaKnown RBP19.66■□□□□ 0.74
CMTM3-214ENST00000567572 CNOT7Q9UIV1 285 aaKnown RBP19.66■□□□□ 0.74
CMTM3-214ENST00000567572 SCAF8Q9UPN6 1271 aaKnown RBP19.66■□□□□ 0.74
CMTM3-214ENST00000567572 GJA3Q9Y6H8 435 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 ZNF541Q9H0D2 1346 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 MYMKA6NI61 221 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 VWA3BQ502W6 1294 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 MCTP2Q6DN12 878 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 WDR93Q6P2C0 686 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 KIAA1328Q86T90 577 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 SNX29Q8TEQ0 813 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 JAKMIP2Q96AA8 810 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 TSG101Q99816 390 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 NT5C3AQ9H0P0 336 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 EPC1Q9H2F5 836 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 SEMA6BQ9H3T3 888 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 GUCA1BQ9UMX6 200 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 PLAGL2Q9UPG8 496 aa19.66■□□□□ 0.74
CMTM3-214ENST00000567572 PLA2G6O60733 806 aa19.65■□□□□ 0.74
CMTM3-214ENST00000567572 SMC1AQ14683 1233 aaKnown RBP19.65■□□□□ 0.74
CMTM3-214ENST00000567572 HDXQ7Z353 690 aa19.65■□□□□ 0.74
CMTM3-214ENST00000567572 TXLNBQ8N3L3 684 aa19.65■□□□□ 0.74
CMTM3-214ENST00000567572 CRYGNQ8WXF5 182 aa19.65■□□□□ 0.74
CMTM3-214ENST00000567572 ANO3Q9BYT9 981 aa19.65■□□□□ 0.74
CMTM3-214ENST00000567572 NHEJ1Q9H9Q4 299 aaPredicted RBP19.65■□□□□ 0.74
CMTM3-214ENST00000567572 ASTN2O75129 1339 aaPredicted RBP19.65■□□□□ 0.74
CMTM3-214ENST00000567572 CCDC66A2RUB6 948 aa19.64■□□□□ 0.74
CMTM3-214ENST00000567572 RASSF10A6NK89 507 aa19.64■□□□□ 0.74
CMTM3-214ENST00000567572 EIF3JO75822 258 aaKnown RBP19.64■□□□□ 0.74
CMTM3-214ENST00000567572 USH1GQ495M9 461 aa19.64■□□□□ 0.74
CMTM3-214ENST00000567572 TBC1D10BQ4KMP7 808 aaPredicted RBP19.64■□□□□ 0.74
CMTM3-214ENST00000567572 BEND6Q5SZJ8 279 aaPredicted RBP19.64■□□□□ 0.74
CMTM3-214ENST00000567572 GLIS2Q9BZE0 524 aaPredicted RBP19.64■□□□□ 0.74
CMTM3-214ENST00000567572 NDST4Q9H3R1 872 aa19.64■□□□□ 0.74
CMTM3-214ENST00000567572 DDX25Q9UHL0 483 aaKnown RBP19.64■□□□□ 0.74
CMTM3-214ENST00000567572 SAR1BQ9Y6B6 198 aa19.64■□□□□ 0.74
CMTM3-214ENST00000567572 OPLAHO14841 1288 aa19.64■□□□□ 0.73
CMTM3-214ENST00000567572 USP11P51784 963 aa19.64■□□□□ 0.73
CMTM3-214ENST00000567572 VAV2P52735 878 aa19.64■□□□□ 0.73
CMTM3-214ENST00000567572 MCM6Q14566 821 aa19.64■□□□□ 0.73
CMTM3-214ENST00000567572 P2RX7Q99572 595 aaKnown RBP19.64■□□□□ 0.73
CMTM3-214ENST00000567572 AGPAT5Q9NUQ2 364 aa19.64■□□□□ 0.73
CMTM3-214ENST00000567572 HACL1Q9UJ83 578 aa19.64■□□□□ 0.73
CMTM3-214ENST00000567572 SIK3Q9Y2K2 1263 aa19.64■□□□□ 0.73
CMTM3-214ENST00000567572 LCA5LO95447 670 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 ABL1P00519 1130 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 IQCEQ6IPM2 695 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 MOXD1Q6UVY6 613 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 TEX2Q8IWB9 1127 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 HAS1Q92839 578 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 PCMTD1Q96MG8 357 aaPredicted RBP19.63■□□□□ 0.73
CMTM3-214ENST00000567572 MBOAT7Q96N66 472 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 ZSWIM4Q9H7M6 989 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 SLC39A2Q9NP94 309 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 ZHX1Q9UKY1 873 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms