RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 TTC22Q5TAA0 569 aa24.13■■□□□ 1.45
HERC2-204ENST00000563945 CYFIP1Q7L576 1253 aa24.13■■□□□ 1.45
HERC2-204ENST00000563945 SMARCC2Q8TAQ2 1214 aa24.13■■□□□ 1.45
HERC2-204ENST00000563945 FAM122AQ96E09 287 aa24.13■■□□□ 1.45
HERC2-204ENST00000563945 IL25Q9H293 177 aa24.13■■□□□ 1.45
HERC2-204ENST00000563945 RNPEPQ9H4A4 650 aa24.13■■□□□ 1.45
HERC2-204ENST00000563945 RTEL1Q9NZ71 1219 aa24.13■■□□□ 1.45
HERC2-204ENST00000563945 ZNF215Q9UL58 517 aaPredicted RBP24.13■■□□□ 1.45
HERC2-204ENST00000563945 BAZ2BQ9UIF8 2168 aaKnown RBP24.12■■□□□ 1.45
HERC2-204ENST00000563945 PTPRSQ13332 1948 aa24.12■■□□□ 1.45
HERC2-204ENST00000563945 TREHO43280 583 aa24.12■■□□□ 1.45
HERC2-204ENST00000563945 FIBPO43427 364 aa24.12■■□□□ 1.45
HERC2-204ENST00000563945 CAND2O75155 1236 aa24.12■■□□□ 1.45
HERC2-204ENST00000563945 PTPROQ16827 1216 aa24.12■■□□□ 1.45
HERC2-204ENST00000563945 METTL7BQ6UX53 244 aa24.12■■□□□ 1.45
HERC2-204ENST00000563945 SAMD11Q96NU1 681 aa24.12■■□□□ 1.45
HERC2-204ENST00000563945 YME1L1Q96TA2 773 aa24.12■■□□□ 1.45
HERC2-204ENST00000563945 E7EWF7 191 aa24.11■■□□□ 1.45
HERC2-204ENST00000563945 CYTH3O43739 400 aa24.11■■□□□ 1.45
HERC2-204ENST00000563945 CTSHP09668 335 aa24.11■■□□□ 1.45
HERC2-204ENST00000563945 ICAM3P32942 547 aa24.11■■□□□ 1.45
HERC2-204ENST00000563945 TROAPQ12815 778 aa24.11■■□□□ 1.45
HERC2-204ENST00000563945 PLEKHG4Q58EX7 1191 aa24.11■■□□□ 1.45
HERC2-204ENST00000563945 UTP14CQ5TAP6 766 aaKnown RBP24.11■■□□□ 1.45
HERC2-204ENST00000563945 CTCFLQ8NI51 663 aaPredicted RBP24.11■■□□□ 1.45
HERC2-204ENST00000563945 RRP36Q96EU6 259 aaKnown RBP24.11■■□□□ 1.45
HERC2-204ENST00000563945 INPP4AQ96PE3 977 aaPredicted RBP24.11■■□□□ 1.45
HERC2-204ENST00000563945 C17orf80Q9BSJ5 609 aa24.11■■□□□ 1.45
HERC2-204ENST00000563945 EPHX3Q9H6B9 360 aa24.11■■□□□ 1.45
HERC2-204ENST00000563945 UBE2ZQ9H832 354 aaPredicted RBP24.11■■□□□ 1.45
HERC2-204ENST00000563945 SETD4Q9NVD3 440 aa24.11■■□□□ 1.45
HERC2-204ENST00000563945 MUC3AQ02505 3323 aa24.11■■□□□ 1.45
HERC2-204ENST00000563945 SPATA31C2B4DYI2 1134 aa24.1■■□□□ 1.45
HERC2-204ENST00000563945 UPP2O95045 317 aa24.1■■□□□ 1.45
HERC2-204ENST00000563945 KIF5BP33176 963 aa24.1■■□□□ 1.45
HERC2-204ENST00000563945 PTH1RQ03431 593 aa24.1■■□□□ 1.45
HERC2-204ENST00000563945 SLC35G1Q2M3R5 365 aa24.1■■□□□ 1.45
HERC2-204ENST00000563945 NLRX1Q86UT6 975 aa24.1■■□□□ 1.45
HERC2-204ENST00000563945 SEC63Q9UGP8 760 aaKnown RBP24.1■■□□□ 1.45
HERC2-204ENST00000563945 CHMLP26374 656 aa24.09■■□□□ 1.45
HERC2-204ENST00000563945 MRPS9P82933 396 aaKnown RBP24.09■■□□□ 1.45
HERC2-204ENST00000563945 HTRA4P83105 476 aaPredicted RBP24.09■■□□□ 1.45
HERC2-204ENST00000563945 SP4Q02446 784 aa24.09■■□□□ 1.45
HERC2-204ENST00000563945 TMEM31Q5JXX7 168 aa24.09■■□□□ 1.45
HERC2-204ENST00000563945 XRRA1Q6P2D8 792 aa24.09■■□□□ 1.45
HERC2-204ENST00000563945 BCAS3Q9H6U6 928 aa24.09■■□□□ 1.45
HERC2-204ENST00000563945 SENP2Q9HC62 589 aa24.09■■□□□ 1.45
HERC2-204ENST00000563945 GSPT1P15170 499 aaKnown RBP24.08■■□□□ 1.45
HERC2-204ENST00000563945 ARHGAP4P98171 946 aa24.08■■□□□ 1.45
HERC2-204ENST00000563945 GIMAP8Q8ND71 665 aaPredicted RBP24.08■■□□□ 1.45
HERC2-204ENST00000563945 APBB2Q92870 758 aa24.08■■□□□ 1.45
HERC2-204ENST00000563945 GPR20Q99678 358 aa24.08■■□□□ 1.45
HERC2-204ENST00000563945 HCN4Q9Y3Q4 1203 aa24.08■■□□□ 1.45
HERC2-204ENST00000563945 COL4A4P53420 1690 aaPredicted RBP24.08■■□□□ 1.44
HERC2-204ENST00000563945 KCNA5P22460 613 aa24.07■■□□□ 1.44
HERC2-204ENST00000563945 HOXC8P31273 242 aa24.07■■□□□ 1.44
HERC2-204ENST00000563945 PLA2G5P39877 138 aa24.07■■□□□ 1.44
HERC2-204ENST00000563945 CASC1Q6TDU7 716 aa24.07■■□□□ 1.44
HERC2-204ENST00000563945 TOP1MTQ969P6 601 aa24.07■■□□□ 1.44
HERC2-204ENST00000563945 MRPL38Q96DV4 380 aaKnown RBP24.07■■□□□ 1.44
HERC2-204ENST00000563945 LZTS2Q9BRK4 669 aa24.07■■□□□ 1.44
HERC2-204ENST00000563945 LRFN3Q9BTN0 628 aa24.07■■□□□ 1.44
HERC2-204ENST00000563945 IFIH1Q9BYX4 1025 aaKnown RBP24.07■■□□□ 1.44
HERC2-204ENST00000563945 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.06■■□□□ 1.44
HERC2-204ENST00000563945 PDE4AP27815 886 aa24.06■■□□□ 1.44
HERC2-204ENST00000563945 GNAQP50148 359 aa24.06■■□□□ 1.44
HERC2-204ENST00000563945 GPM6BQ13491 265 aa24.06■■□□□ 1.44
HERC2-204ENST00000563945 EPC2Q52LR7 807 aa24.06■■□□□ 1.44
HERC2-204ENST00000563945 PCNX4Q63HM2 1172 aa24.06■■□□□ 1.44
HERC2-204ENST00000563945 USP17L6PQ6QN14 398 aa24.06■■□□□ 1.44
HERC2-204ENST00000563945 NFXL1Q6ZNB6 911 aa24.06■■□□□ 1.44
HERC2-204ENST00000563945 RSPH3Q86UC2 560 aa24.06■■□□□ 1.44
HERC2-204ENST00000563945 SP7Q8TDD2 431 aaPredicted RBP24.06■■□□□ 1.44
HERC2-204ENST00000563945 MAP3K14Q99558 947 aa24.06■■□□□ 1.44
HERC2-204ENST00000563945 SENP7Q9BQF6 1050 aa24.06■■□□□ 1.44
HERC2-204ENST00000563945 BRWD1Q9NSI6 2320 aa24.06■■□□□ 1.44
HERC2-204ENST00000563945 FRMPD4Q14CM0 1322 aa24.06■■□□□ 1.44
HERC2-204ENST00000563945 LEXMQ3ZCV2 418 aa24.05■■□□□ 1.44
HERC2-204ENST00000563945 TIGD5Q53EQ6 642 aa24.05■■□□□ 1.44
HERC2-204ENST00000563945 EP400NLQ6ZTU2 488 aa24.05■■□□□ 1.44
HERC2-204ENST00000563945 TRIM50Q86XT4 487 aa24.05■■□□□ 1.44
HERC2-204ENST00000563945 IGDCC4Q8TDY8 1250 aa24.05■■□□□ 1.44
HERC2-204ENST00000563945 CDHR1Q96JP9 859 aa24.05■■□□□ 1.44
HERC2-204ENST00000563945 SPZ1Q9BXG8 430 aa24.05■■□□□ 1.44
HERC2-204ENST00000563945 NRCAMQ92823 1304 aa24.05■■□□□ 1.44
HERC2-204ENST00000563945 REV3LO60673 3130 aa24.04■■□□□ 1.44
HERC2-204ENST00000563945 DDAH1O94760 285 aa24.04■■□□□ 1.44
HERC2-204ENST00000563945 SMARCA1P28370 1054 aa24.04■■□□□ 1.44
HERC2-204ENST00000563945 SEMA3FQ13275 785 aa24.04■■□□□ 1.44
HERC2-204ENST00000563945 PUS10Q3MIT2 529 aaKnown RBP24.04■■□□□ 1.44
HERC2-204ENST00000563945 TMEM192Q8IY95 271 aa24.04■■□□□ 1.44
HERC2-204ENST00000563945 ZNF654Q8IZM8 581 aa24.04■■□□□ 1.44
HERC2-204ENST00000563945 TMTC2Q8N394 836 aa24.04■■□□□ 1.44
HERC2-204ENST00000563945 SIP14410 1827 aa24.04■■□□□ 1.44
HERC2-204ENST00000563945 MICAL3Q7RTP6 2002 aa24.03■■□□□ 1.44
HERC2-204ENST00000563945 CCDC69A6NI79 296 aa24.03■■□□□ 1.44
HERC2-204ENST00000563945 SGSM2O43147 1006 aa24.03■■□□□ 1.44
HERC2-204ENST00000563945 SSTR3P32745 418 aaPredicted RBP24.03■■□□□ 1.44
HERC2-204ENST00000563945 MKRN4PQ13434 485 aaPredicted RBP24.03■■□□□ 1.44
HERC2-204ENST00000563945 PTCRAQ6ISU1 281 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms