RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 MSL3Q8N5Y2 521 aaKnown RBP13.16□□□□□ -0.3
HERC1-214ENST00000561400 RAET1EQ8TD07 263 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 ITFG2Q969R8 447 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 MBOAT7Q96N66 472 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 MPHOSPH6Q99547 160 aaKnown RBP13.16□□□□□ -0.3
HERC1-214ENST00000561400 MXRA8Q9BRK3 442 aa13.16□□□□□ -0.3
HERC1-214ENST00000561400 TFIP11Q9UBB9 837 aaKnown RBP13.16□□□□□ -0.3
HERC1-214ENST00000561400 PRMT2P55345 433 aa13.15□□□□□ -0.3
HERC1-214ENST00000561400 TRIM32Q13049 653 aa13.15□□□□□ -0.3
HERC1-214ENST00000561400 PRAMEF19Q5SWL8 479 aa13.15□□□□□ -0.3
HERC1-214ENST00000561400 CALR3Q96L12 384 aaKnown RBP13.15□□□□□ -0.3
HERC1-214ENST00000561400 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.15□□□□□ -0.3
HERC1-214ENST00000561400 CLIC4Q9Y696 253 aa13.15□□□□□ -0.3
HERC1-214ENST00000561400 PTCH2Q9Y6C5 1203 aa13.15□□□□□ -0.3
HERC1-214ENST00000561400 MRVI1Q9Y6F6 885 aa13.15□□□□□ -0.3
HERC1-214ENST00000561400 STAM2O75886 525 aa13.15□□□□□ -0.31
HERC1-214ENST00000561400 ARP10275 920 aa13.15□□□□□ -0.31
HERC1-214ENST00000561400 GCFC2P16383 781 aaKnown RBP13.15□□□□□ -0.31
HERC1-214ENST00000561400 TNNT3P45378 269 aaPredicted RBP13.15□□□□□ -0.31
HERC1-214ENST00000561400 CEBPZQ03701 1054 aaKnown RBP13.15□□□□□ -0.31
HERC1-214ENST00000561400 SEPT14Q6ZU15 432 aa13.15□□□□□ -0.31
HERC1-214ENST00000561400 POTEDQ86YR6 584 aa13.15□□□□□ -0.31
HERC1-214ENST00000561400 UIMC1Q96RL1 719 aa13.15□□□□□ -0.31
HERC1-214ENST00000561400 JADE2Q9NQC1 790 aa13.15□□□□□ -0.31
HERC1-214ENST00000561400 PDGFCQ9NRA1 345 aa13.15□□□□□ -0.31
HERC1-214ENST00000561400 DDX25Q9UHL0 483 aaKnown RBP13.15□□□□□ -0.31
HERC1-214ENST00000561400 PTPN22Q9Y2R2 807 aa13.15□□□□□ -0.31
HERC1-214ENST00000561400 SF3A1Q15459 793 aaKnown RBP13.14□□□□□ -0.31
HERC1-214ENST00000561400 CSPP1Q1MSJ5 1256 aa13.14□□□□□ -0.31
HERC1-214ENST00000561400 Q4G0T1 1027 aa13.14□□□□□ -0.31
HERC1-214ENST00000561400 TAPT1Q6NXT6 567 aa13.14□□□□□ -0.31
HERC1-214ENST00000561400 PLA2G4DQ86XP0 818 aa13.14□□□□□ -0.31
HERC1-214ENST00000561400 PXYLP1Q8TE99 480 aa13.14□□□□□ -0.31
HERC1-214ENST00000561400 TNPO1Q92973 898 aaKnown RBP13.14□□□□□ -0.31
HERC1-214ENST00000561400 TMEM60Q9H2L4 133 aa13.14□□□□□ -0.31
HERC1-214ENST00000561400 ABHD16BQ9H3Z7 469 aa13.14□□□□□ -0.31
HERC1-214ENST00000561400 KCNH7Q9NS40 1196 aa13.14□□□□□ -0.31
HERC1-214ENST00000561400 BRCA2P51587 3418 aa13.14□□□□□ -0.31
HERC1-214ENST00000561400 MTMR1Q13613 665 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 ACVR2BQ13705 512 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 TMEM63BQ5T3F8 832 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 NIPA1Q7RTP0 329 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 C4orf32Q8N8J7 132 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 GJA10Q969M2 543 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 VTA1Q9NP79 307 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 ATP6V1DQ9Y5K8 247 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 NEMFO60524 1076 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 ATP9AO75110 1047 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 ZNF865P0CJ78 1059 aaPredicted RBP13.13□□□□□ -0.31
HERC1-214ENST00000561400 PTGDRQ13258 359 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 PTPAQ15257 358 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 ANO1Q5XXA6 986 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 CTU1Q7Z7A3 348 aaKnown RBP13.13□□□□□ -0.31
HERC1-214ENST00000561400 NLRX1Q86UT6 975 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 TRMT44Q8IYL2 757 aaKnown RBP13.13□□□□□ -0.31
HERC1-214ENST00000561400 TRPV1Q8NER1 839 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 GPRASP2Q96D09 838 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 ZNF396Q96N95 335 aaPredicted RBP13.13□□□□□ -0.31
HERC1-214ENST00000561400 NAP1L4Q99733 375 aaKnown RBP13.13□□□□□ -0.31
HERC1-214ENST00000561400 CNPY2Q9Y2B0 182 aa13.13□□□□□ -0.31
HERC1-214ENST00000561400 SPATA31C2B4DYI2 1134 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 MSH4O15457 936 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 ARIH2O95376 493 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 GRK4P32298 578 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 ICAM3P32942 547 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 SP2Q02086 613 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 CACNB2Q08289 660 aaPredicted RBP13.12□□□□□ -0.31
HERC1-214ENST00000561400 GNPTABQ3T906 1256 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 MFSD14CQ5VZR4 134 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 DNAJC14Q6Y2X3 702 aaPredicted RBP13.12□□□□□ -0.31
HERC1-214ENST00000561400 ETNPPLQ8TBG4 499 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 HAS1Q92839 578 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 BCAS3Q9H6U6 928 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 KCNMB3Q9NPA1 279 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 POLR3EQ9NVU0 708 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 RBM47A0AV96 593 aaKnown RBP13.12□□□□□ -0.31
HERC1-214ENST00000561400 FIBPO43427 364 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 HMGCRP04035 888 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 CYBAP13498 195 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 PTGS1P23219 599 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 ADCYAP1R1P41586 468 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 NASPP49321 788 aaPredicted RBP13.12□□□□□ -0.31
HERC1-214ENST00000561400 ORC2Q13416 577 aaPredicted RBP13.12□□□□□ -0.31
HERC1-214ENST00000561400 CCDC144BQ3MJ40 725 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 CCDC62Q6P9F0 684 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 ARMCX6Q7L4S7 300 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 SLAIN1Q8ND83 568 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 MTMR9Q96QG7 549 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 PPP1R9BQ96SB3 815 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 AGO4Q9HCK5 861 aaKnown RBP13.12□□□□□ -0.31
HERC1-214ENST00000561400 PKD2L1Q9P0L9 805 aa13.12□□□□□ -0.31
HERC1-214ENST00000561400 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.11□□□□□ -0.31
HERC1-214ENST00000561400 CCDC189A1A4V9 331 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 ADCY6O43306 1168 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 ATP2C1P98194 919 aaPredicted RBP13.11□□□□□ -0.31
HERC1-214ENST00000561400 CCDC173Q0VFZ6 552 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 CALCRLQ16602 461 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 LY6KQ17RY6 165 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 ICE2Q659A1 982 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms