RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 KCNQ1P51787 676 aa20.1■□□□□ 0.81
CRTC3-208ENST00000560098 NEDD9Q14511 834 aa20.1■□□□□ 0.81
CRTC3-208ENST00000560098 NECAB3Q96P71 396 aaPredicted RBP20.1■□□□□ 0.81
CRTC3-208ENST00000560098 USP26Q9BXU7 913 aa20.1■□□□□ 0.81
CRTC3-208ENST00000560098 FIBPO43427 364 aa20.09■□□□□ 0.81
CRTC3-208ENST00000560098 SMIM10L2AP0DMW4 78 aa20.09■□□□□ 0.81
CRTC3-208ENST00000560098 SMIM10L2BP0DMW5 78 aa20.09■□□□□ 0.81
CRTC3-208ENST00000560098 METTL7BQ6UX53 244 aa20.09■□□□□ 0.81
CRTC3-208ENST00000560098 CYFIP1Q7L576 1253 aa20.09■□□□□ 0.81
CRTC3-208ENST00000560098 DBF4BQ8NFT6 615 aa20.09■□□□□ 0.81
CRTC3-208ENST00000560098 CTCFLQ8NI51 663 aaPredicted RBP20.09■□□□□ 0.81
CRTC3-208ENST00000560098 TGS1Q96RS0 853 aaKnown RBP20.09■□□□□ 0.81
CRTC3-208ENST00000560098 SPZ1Q9BXG8 430 aa20.09■□□□□ 0.81
CRTC3-208ENST00000560098 RTEL1Q9NZ71 1219 aa20.09■□□□□ 0.81
CRTC3-208ENST00000560098 RBM8AQ9Y5S9 174 aaKnown RBP20.09■□□□□ 0.81
CRTC3-208ENST00000560098 BDP1A6H8Y1 2624 aa20.08■□□□□ 0.81
CRTC3-208ENST00000560098 LINC01553A4QN01 128 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 RBAK-RBAKDNI3L0D1 243 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 DDAH1O94760 285 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 KIF5BP33176 963 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 ERVK-21P61565 698 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 SEMA3FQ13275 785 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 FAM117BQ6P1L5 589 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.08■□□□□ 0.8
CRTC3-208ENST00000560098 ZNF654Q8IZM8 581 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 SMARCC2Q8TAQ2 1214 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 GDPD5Q8WTR4 605 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 HLA-CQ95604 372 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 RRP36Q96EU6 259 aaKnown RBP20.08■□□□□ 0.8
CRTC3-208ENST00000560098 RNPEPQ9H4A4 650 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 SUGCTQ9HAC7 445 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 LY9Q9HBG7 655 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 LMCD1Q9NZU5 365 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 MTUS1Q9ULD2 1270 aa20.08■□□□□ 0.8
CRTC3-208ENST00000560098 BAZ2BQ9UIF8 2168 aaKnown RBP20.07■□□□□ 0.8
CRTC3-208ENST00000560098 TREHO43280 583 aa20.07■□□□□ 0.8
CRTC3-208ENST00000560098 AMHP03971 560 aa20.07■□□□□ 0.8
CRTC3-208ENST00000560098 SMARCA1P28370 1054 aa20.07■□□□□ 0.8
CRTC3-208ENST00000560098 MKRN4PQ13434 485 aaPredicted RBP20.07■□□□□ 0.8
CRTC3-208ENST00000560098 USP17L6PQ6QN14 398 aa20.07■□□□□ 0.8
CRTC3-208ENST00000560098 CUL5Q93034 780 aa20.07■□□□□ 0.8
CRTC3-208ENST00000560098 GPR20Q99678 358 aa20.07■□□□□ 0.8
CRTC3-208ENST00000560098 MTA3Q9BTC8 594 aa20.07■□□□□ 0.8
CRTC3-208ENST00000560098 MYL10Q9BUA6 226 aa20.07■□□□□ 0.8
CRTC3-208ENST00000560098 SEC63Q9UGP8 760 aaKnown RBP20.07■□□□□ 0.8
CRTC3-208ENST00000560098 INSL6Q9Y581 213 aa20.07■□□□□ 0.8
CRTC3-208ENST00000560098 PIK3CDO00329 1044 aa20.06■□□□□ 0.8
CRTC3-208ENST00000560098 CAND2O75155 1236 aa20.06■□□□□ 0.8
CRTC3-208ENST00000560098 GNAT1P11488 350 aa20.06■□□□□ 0.8
CRTC3-208ENST00000560098 COL9A1P20849 921 aa20.06■□□□□ 0.8
CRTC3-208ENST00000560098 PLEKHG4Q58EX7 1191 aa20.06■□□□□ 0.8
CRTC3-208ENST00000560098 PCNX4Q63HM2 1172 aa20.06■□□□□ 0.8
CRTC3-208ENST00000560098 XRRA1Q6P2D8 792 aa20.06■□□□□ 0.8
CRTC3-208ENST00000560098 CASC1Q6TDU7 716 aa20.06■□□□□ 0.8
CRTC3-208ENST00000560098 LZTS2Q9BRK4 669 aa20.06■□□□□ 0.8
CRTC3-208ENST00000560098 COL4A4P53420 1690 aaPredicted RBP20.06■□□□□ 0.8
CRTC3-208ENST00000560098 MEIS2O14770 477 aa20.05■□□□□ 0.8
CRTC3-208ENST00000560098 MYOCDQ8IZQ8 938 aa20.05■□□□□ 0.8
CRTC3-208ENST00000560098 SENP7Q9BQF6 1050 aa20.05■□□□□ 0.8
CRTC3-208ENST00000560098 SETD4Q9NVD3 440 aa20.05■□□□□ 0.8
CRTC3-208ENST00000560098 ZNF215Q9UL58 517 aaPredicted RBP20.05■□□□□ 0.8
CRTC3-208ENST00000560098 PRC1O43663 620 aa20.04■□□□□ 0.8
CRTC3-208ENST00000560098 GNAQP50148 359 aa20.04■□□□□ 0.8
CRTC3-208ENST00000560098 IRX6P78412 446 aaPredicted RBP20.04■□□□□ 0.8
CRTC3-208ENST00000560098 TRIM50Q86XT4 487 aa20.04■□□□□ 0.8
CRTC3-208ENST00000560098 TMTC2Q8N394 836 aa20.04■□□□□ 0.8
CRTC3-208ENST00000560098 SEPT8Q92599 483 aa20.04■□□□□ 0.8
CRTC3-208ENST00000560098 PLEKHA8P1O95397 391 aa20.03■□□□□ 0.8
CRTC3-208ENST00000560098 CTSHP09668 335 aa20.03■□□□□ 0.8
CRTC3-208ENST00000560098 MCM5P33992 734 aa20.03■□□□□ 0.8
CRTC3-208ENST00000560098 HTRA4P83105 476 aaPredicted RBP20.03■□□□□ 0.8
CRTC3-208ENST00000560098 UTP14CQ5TAP6 766 aaKnown RBP20.03■□□□□ 0.8
CRTC3-208ENST00000560098 NFXL1Q6ZNB6 911 aa20.03■□□□□ 0.8
CRTC3-208ENST00000560098 NLRX1Q86UT6 975 aa20.03■□□□□ 0.8
CRTC3-208ENST00000560098 SRBD1Q8N5C6 995 aaKnown RBP20.03■□□□□ 0.8
CRTC3-208ENST00000560098 TMEM87BQ96K49 555 aa20.03■□□□□ 0.8
CRTC3-208ENST00000560098 TELO2Q9Y4R8 837 aa20.03■□□□□ 0.8
CRTC3-208ENST00000560098 TCF20Q9UGU0 1960 aaKnown RBP20.03■□□□□ 0.8
CRTC3-208ENST00000560098 NCOR1O75376 2440 aa20.03■□□□□ 0.8
CRTC3-208ENST00000560098 CCDC69A6NI79 296 aa20.02■□□□□ 0.8
CRTC3-208ENST00000560098 SH2B2O14492 632 aaPredicted RBP20.02■□□□□ 0.8
CRTC3-208ENST00000560098 SP4Q02446 784 aa20.02■□□□□ 0.8
CRTC3-208ENST00000560098 GIMAP8Q8ND71 665 aaPredicted RBP20.02■□□□□ 0.8
CRTC3-208ENST00000560098 C17orf80Q9BSJ5 609 aa20.02■□□□□ 0.8
CRTC3-208ENST00000560098 ADAM17P78536 824 aa20.02■□□□□ 0.79
CRTC3-208ENST00000560098 ARHGAP4P98171 946 aa20.02■□□□□ 0.79
CRTC3-208ENST00000560098 CMTR1Q8N1G2 835 aaKnown RBP20.02■□□□□ 0.79
CRTC3-208ENST00000560098 FBXO22Q8NEZ5 403 aa20.02■□□□□ 0.79
CRTC3-208ENST00000560098 SP7Q8TDD2 431 aaPredicted RBP20.02■□□□□ 0.79
CRTC3-208ENST00000560098 LMBR1Q8WVP7 490 aa20.02■□□□□ 0.79
CRTC3-208ENST00000560098 OSBPL7Q9BZF2 842 aa20.02■□□□□ 0.79
CRTC3-208ENST00000560098 LSG1Q9H089 658 aaKnown RBP20.02■□□□□ 0.79
CRTC3-208ENST00000560098 PSTPIP2Q9H939 334 aa20.02■□□□□ 0.79
CRTC3-208ENST00000560098 NRCAMQ92823 1304 aa20.01■□□□□ 0.79
CRTC3-208ENST00000560098 CALM1P0DP23 149 aa20.01■□□□□ 0.79
CRTC3-208ENST00000560098 CALM2P0DP24 149 aa20.01■□□□□ 0.79
CRTC3-208ENST00000560098 CALM3P0DP25 149 aa20.01■□□□□ 0.79
CRTC3-208ENST00000560098 RXRAP19793 462 aa20.01■□□□□ 0.79
CRTC3-208ENST00000560098 LIFRP42702 1097 aa20.01■□□□□ 0.79
CRTC3-208ENST00000560098 TOP1MTQ969P6 601 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms