RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 PTCH2Q9Y6C5 1203 aa18.68■□□□□ 0.58
TPM1-219ENST00000559397 ELNP15502 786 aa18.67■□□□□ 0.58
TPM1-219ENST00000559397 ICAM3P32942 547 aa18.67■□□□□ 0.58
TPM1-219ENST00000559397 MCM7P33993 719 aa18.67■□□□□ 0.58
TPM1-219ENST00000559397 SEMA3FQ13275 785 aa18.67■□□□□ 0.58
TPM1-219ENST00000559397 TAPT1Q6NXT6 567 aa18.67■□□□□ 0.58
TPM1-219ENST00000559397 ABHD16BQ9H3Z7 469 aa18.67■□□□□ 0.58
TPM1-219ENST00000559397 SPATA31C2B4DYI2 1134 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 ARP10275 920 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 SYKP43405 635 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 SETQ01105 290 aaPredicted RBP18.66■□□□□ 0.58
TPM1-219ENST00000559397 TRIM32Q13049 653 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 ACVR2BQ13705 512 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 PRAMEF19Q5SWL8 479 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 ARL6IP4Q66PJ3 421 aaKnown RBP18.66■□□□□ 0.58
TPM1-219ENST00000559397 CTU1Q7Z7A3 348 aaKnown RBP18.66■□□□□ 0.58
TPM1-219ENST00000559397 NLRX1Q86UT6 975 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 PLA2G4DQ86XP0 818 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 GPRASP2Q96D09 838 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 RBM47A0AV96 593 aaKnown RBP18.66■□□□□ 0.58
TPM1-219ENST00000559397 NEMFO60524 1076 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 ZNF865P0CJ78 1059 aaPredicted RBP18.66■□□□□ 0.58
TPM1-219ENST00000559397 CCDC192P0DO97 292 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 MTMR1Q13613 665 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 GNPTABQ3T906 1256 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 MFSD14CQ5VZR4 134 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 SEPT14Q6ZU15 432 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 CKAP2LQ8IYA6 745 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 SLAIN1Q8ND83 568 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 CSRNP2Q9H175 543 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 TMEM60Q9H2L4 133 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 KCNMB3Q9NPA1 279 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 PDGFCQ9NRA1 345 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 KCNH7Q9NS40 1196 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 KCNH3Q9ULD8 1083 aa18.66■□□□□ 0.58
TPM1-219ENST00000559397 MSH4O15457 936 aa18.65■□□□□ 0.58
TPM1-219ENST00000559397 MAFGO15525 162 aa18.65■□□□□ 0.58
TPM1-219ENST00000559397 HMGCRP04035 888 aa18.65■□□□□ 0.58
TPM1-219ENST00000559397 TRPV1Q8NER1 839 aa18.65■□□□□ 0.58
TPM1-219ENST00000559397 ETNPPLQ8TBG4 499 aa18.65■□□□□ 0.58
TPM1-219ENST00000559397 MTMR9Q96QG7 549 aa18.65■□□□□ 0.58
TPM1-219ENST00000559397 AGO4Q9HCK5 861 aaKnown RBP18.65■□□□□ 0.58
TPM1-219ENST00000559397 FAM13BQ9NYF5 915 aa18.65■□□□□ 0.58
TPM1-219ENST00000559397 NRBP1Q9UHY1 535 aa18.65■□□□□ 0.58
TPM1-219ENST00000559397 TYRO3Q06418 890 aa18.64■□□□□ 0.57
TPM1-219ENST00000559397 ELOA2Q8IYF1 753 aaPredicted RBP18.64■□□□□ 0.57
TPM1-219ENST00000559397 HAS1Q92839 578 aa18.64■□□□□ 0.57
TPM1-219ENST00000559397 CDHR1Q96JP9 859 aa18.64■□□□□ 0.57
TPM1-219ENST00000559397 ZHX1Q9UKY1 873 aaPredicted RBP18.64■□□□□ 0.57
TPM1-219ENST00000559397 LAD1O00515 517 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 ATP9AO75110 1047 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 ARIH2O95376 493 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 CYBAP13498 195 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 GRK4P32298 578 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 CACNB2Q08289 660 aaPredicted RBP18.63■□□□□ 0.57
TPM1-219ENST00000559397 IL17AQ16552 155 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 SPECC1Q5M775 1068 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 MAP3K21Q5TCX8 1036 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 CCDC62Q6P9F0 684 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 SDF4Q9BRK5 362 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 PRDM10Q9NQV6 1147 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 DDX41Q9UJV9 622 aaKnown RBP18.63■□□□□ 0.57
TPM1-219ENST00000559397 TBX3O15119 743 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 TGFB3P10600 412 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 KCNA2P16389 499 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 PRPHP41219 470 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 ADCYAP1R1P41586 468 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 SP2Q02086 613 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 CALCRLQ16602 461 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 TMEM63BQ5T3F8 832 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 USP49Q70CQ1 688 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 SCFD2Q8WU76 684 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 SLC5A5Q92911 643 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 GJA10Q969M2 543 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 UIMC1Q96RL1 719 aa18.63■□□□□ 0.57
TPM1-219ENST00000559397 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.62■□□□□ 0.57
TPM1-219ENST00000559397 PRKAR2AP13861 404 aaKnown RBP18.62■□□□□ 0.57
TPM1-219ENST00000559397 ITGB3BPQ13352 177 aaPredicted RBP18.62■□□□□ 0.57
TPM1-219ENST00000559397 CCDC144BQ3MJ40 725 aa18.62■□□□□ 0.57
TPM1-219ENST00000559397 IQSEC1Q6DN90 963 aa18.62■□□□□ 0.57
TPM1-219ENST00000559397 KCNV1Q6PIU1 500 aa18.62■□□□□ 0.57
TPM1-219ENST00000559397 FAM20AQ96MK3 541 aa18.62■□□□□ 0.57
TPM1-219ENST00000559397 SENP7Q9BQF6 1050 aa18.62■□□□□ 0.57
TPM1-219ENST00000559397 ZNF577Q9BSK1 485 aa18.62■□□□□ 0.57
TPM1-219ENST00000559397 PANK2Q9BZ23 570 aa18.62■□□□□ 0.57
TPM1-219ENST00000559397 IPO5O00410 1097 aaKnown RBP18.61■□□□□ 0.57
TPM1-219ENST00000559397 DHX15O43143 795 aaKnown RBP18.61■□□□□ 0.57
TPM1-219ENST00000559397 INHAP05111 366 aa18.61■□□□□ 0.57
TPM1-219ENST00000559397 OR52Z1P0C646 297 aa18.61■□□□□ 0.57
TPM1-219ENST00000559397 TTLL4Q14679 1199 aa18.61■□□□□ 0.57
TPM1-219ENST00000559397 PKN2Q16513 984 aaKnown RBP18.61■□□□□ 0.57
TPM1-219ENST00000559397 LY6KQ17RY6 165 aa18.61■□□□□ 0.57
TPM1-219ENST00000559397 FBXO46Q6PJ61 603 aaPredicted RBP18.61■□□□□ 0.57
TPM1-219ENST00000559397 SASS6Q6UVJ0 657 aa18.61■□□□□ 0.57
TPM1-219ENST00000559397 KRBA2Q6ZNG9 492 aa18.61■□□□□ 0.57
TPM1-219ENST00000559397 DOCK5Q9H7D0 1870 aa18.61■□□□□ 0.57
TPM1-219ENST00000559397 VWA3AA6NCI4 1184 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 ADCY6O43306 1168 aa18.6■□□□□ 0.57
TPM1-219ENST00000559397 UBA1P22314 1058 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms