RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 DHX8Q14562 1220 aaKnown RBP15.4■□□□□ 0.06
TPM1-215ENST00000558868 COBLL1Q53SF7 1204 aa15.4■□□□□ 0.06
TPM1-215ENST00000558868 MAP1SQ66K74 1059 aaPredicted RBP15.4■□□□□ 0.06
TPM1-215ENST00000558868 NLRX1Q86UT6 975 aa15.4■□□□□ 0.06
TPM1-215ENST00000558868 GIMAP8Q8ND71 665 aaPredicted RBP15.4■□□□□ 0.06
TPM1-215ENST00000558868 LRRC15Q8TF66 581 aa15.4■□□□□ 0.06
TPM1-215ENST00000558868 EIF2AK1Q9BQI3 630 aaKnown RBP15.4■□□□□ 0.06
TPM1-215ENST00000558868 PDCD2LQ9BRP1 358 aa15.4■□□□□ 0.06
TPM1-215ENST00000558868 RRAGCQ9HB90 399 aa15.4■□□□□ 0.06
TPM1-215ENST00000558868 TBC1D22BQ9NU19 505 aa15.4■□□□□ 0.06
TPM1-215ENST00000558868 TCEAL9Q9UHQ7 104 aa15.4■□□□□ 0.06
TPM1-215ENST00000558868 NFE2L3Q9Y4A8 694 aa15.4■□□□□ 0.06
TPM1-215ENST00000558868 POTEB3A0JP26 581 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 PSMA7O14818 248 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 MED24O75448 989 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 SLC25A27O95847 323 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 ARP10275 920 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 ITGB5P18084 799 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 CDK11BP21127 795 aaKnown RBP15.39■□□□□ 0.05
TPM1-215ENST00000558868 HERVK_113P62684 666 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 FANCCQ00597 558 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 MLLT1Q03111 559 aaPredicted RBP15.39■□□□□ 0.05
TPM1-215ENST00000558868 FMR1Q06787 632 aaKnown RBP eCLIP15.39■□□□□ 0.05
TPM1-215ENST00000558868 MTMR1Q13613 665 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 EPHA7Q15375 998 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 TPD52L1Q16890 204 aaPredicted RBP15.39■□□□□ 0.05
TPM1-215ENST00000558868 KLHL10Q6JEL2 608 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 POTEBQ6S5H4 581 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 CATSPER3Q86XQ3 398 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 ADSSL1Q8N142 457 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 C2orf69Q8N8R5 385 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 DHTKD1Q96HY7 919 aaPredicted RBP15.39■□□□□ 0.05
TPM1-215ENST00000558868 CDHR1Q96JP9 859 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 IWS1Q96ST2 819 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 ASCC2Q9H1I8 757 aaPredicted RBP15.39■□□□□ 0.05
TPM1-215ENST00000558868 AGO4Q9HCK5 861 aaKnown RBP15.39■□□□□ 0.05
TPM1-215ENST00000558868 KCNH7Q9NS40 1196 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 FANCLQ9NW38 375 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 CYP39A1Q9NYL5 469 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 PNMA3Q9UL41 463 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 A0A0G2JMZ2 1700 aa15.39■□□□□ 0.05
TPM1-215ENST00000558868 TNRC18O15417 2968 aaPredicted RBP15.39■□□□□ 0.05
TPM1-215ENST00000558868 MYMKA6NI61 221 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 B4DLN1 442 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 SERPINC1P01008 464 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 SSBP05455 408 aaKnown RBP eCLIP15.38■□□□□ 0.05
TPM1-215ENST00000558868 MYCLP12524 364 aaPredicted RBP15.38■□□□□ 0.05
TPM1-215ENST00000558868 CD44P16070 742 aaKnown RBP15.38■□□□□ 0.05
TPM1-215ENST00000558868 MRPS9P82933 396 aaKnown RBP15.38■□□□□ 0.05
TPM1-215ENST00000558868 ECM1Q16610 540 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 KCNK18Q7Z418 384 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 VSIG10LQ86VR7 867 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 CCDC65Q8IXS2 484 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 DNERQ8NFT8 737 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 IL31RAQ8NI17 732 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 DDX12PQ92771 950 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 GPRASP2Q96D09 838 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 UIMC1Q96RL1 719 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 SPATC1LQ9H0A9 340 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 ZNF408Q9H9D4 720 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 GBA2Q9HCG7 927 aaPredicted RBP15.38■□□□□ 0.05
TPM1-215ENST00000558868 NMRK2Q9NPI5 230 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 A1CFQ9NQ94 594 aaKnown RBP15.38■□□□□ 0.05
TPM1-215ENST00000558868 CTNND2Q9UQB3 1225 aa15.38■□□□□ 0.05
TPM1-215ENST00000558868 BICDL2A1A5D9 508 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 E9PMD0 336 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 TRAF5O00463 557 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 EYA4O95677 639 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 KRT18P05783 430 aaKnown RBP15.37■□□□□ 0.05
TPM1-215ENST00000558868 NR3C2P08235 984 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 SPATA31C1P0DKV0 1188 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 CETPP11597 493 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 PRCPP42785 496 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 GTF2A2P52657 109 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 SPAG1Q07617 926 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 B3GNT9Q6UX72 402 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 GPBP1Q86WP2 473 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 ANKRD35Q8N283 1001 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 SYT2Q8N9I0 419 aaPredicted RBP15.37■□□□□ 0.05
TPM1-215ENST00000558868 ANKRD20A12PQ8NF67 263 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 NOC3LQ8WTT2 800 aaKnown RBP15.37■□□□□ 0.05
TPM1-215ENST00000558868 NELFBQ8WX92 580 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 NACC1Q96RE7 527 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 MPHOSPH6Q99547 160 aaKnown RBP15.37■□□□□ 0.05
TPM1-215ENST00000558868 HSD17B14Q9BPX1 270 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 IFNKQ9P0W0 207 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 BTBD7Q9P203 1132 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 SLC45A1Q9Y2W3 748 aa15.37■□□□□ 0.05
TPM1-215ENST00000558868 POTEFA5A3E0 1075 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 EML1O00423 815 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 KIF20AO95235 890 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 POTEIP0CG38 1075 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 POTEJP0CG39 1038 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 ZNF18P17022 549 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 SLC12A3P55017 1021 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 UBASH3AP57075 661 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 MOGSQ13724 837 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 GNPTABQ3T906 1256 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 GPAT2Q6NUI2 795 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 POTEGQ6S5H5 508 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms