RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 FZD1Q9UP38 647 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 SFI1A8K8P3 1242 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 TUBB4AP04350 444 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 CAP2P40123 477 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 SLC12A3P55017 1021 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 PPP2R3AQ06190 1150 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 RASA3Q14644 834 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 TSR1Q2NL82 804 aaKnown RBP11.72□□□□□ -0.53
TPM1-210ENST00000558264 HYIQ5T013 277 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 TEX35Q5T0J7 233 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 UBXN4Q92575 508 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 AGBL1Q96MI9 1066 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 DNAJC7Q99615 494 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 NAP1L4Q99733 375 aaKnown RBP11.72□□□□□ -0.53
TPM1-210ENST00000558264 BHMT2Q9H2M3 363 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 VCPKMTQ9H867 229 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 HOMER2Q9NSB8 354 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 CGNQ9P2M7 1197 aaKnown RBP11.72□□□□□ -0.53
TPM1-210ENST00000558264 MRFAP1Q9Y605 127 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 RGPD3A6NKT7 1758 aaPredicted RBP11.72□□□□□ -0.53
TPM1-210ENST00000558264 RGPD4Q7Z3J3 1758 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 DDX39AO00148 427 aaKnown RBP11.72□□□□□ -0.53
TPM1-210ENST00000558264 INPP5BP32019 993 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 MAP3K9P80192 1104 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 Q4G0T1 1027 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 CCDC40Q4G0X9 1142 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 HAUS3Q68CZ6 603 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 CCDC65Q8IXS2 484 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 CPXCR1Q8N123 301 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 TSG101Q99816 390 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 REEP2Q9BRK0 252 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 CRACR2AQ9BSW2 395 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 IKZF4Q9H2S9 585 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 MYOZ2Q9NPC6 264 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 PRDM10Q9NQV6 1147 aa11.72□□□□□ -0.53
TPM1-210ENST00000558264 TADA3O75528 432 aa11.71□□□□□ -0.53
TPM1-210ENST00000558264 FOSP01100 380 aaPredicted RBP11.71□□□□□ -0.53
TPM1-210ENST00000558264 POLD1P28340 1107 aa11.71□□□□□ -0.53
TPM1-210ENST00000558264 PPP1R2P41236 205 aa11.71□□□□□ -0.53
TPM1-210ENST00000558264 HERVK_113P62684 666 aa11.71□□□□□ -0.53
TPM1-210ENST00000558264 SEMA3FQ13275 785 aa11.71□□□□□ -0.53
TPM1-210ENST00000558264 KIF4BQ2VIQ3 1234 aa11.71□□□□□ -0.53
TPM1-210ENST00000558264 SAMD7Q7Z3H4 446 aa11.71□□□□□ -0.53
TPM1-210ENST00000558264 KRT26Q7Z3Y9 468 aa11.71□□□□□ -0.53
TPM1-210ENST00000558264 SFR1Q86XK3 245 aa11.71□□□□□ -0.53
TPM1-210ENST00000558264 SCFD1Q8WVM8 642 aa11.71□□□□□ -0.53
TPM1-210ENST00000558264 LRRC27Q9C0I9 530 aa11.71□□□□□ -0.53
TPM1-210ENST00000558264 PIM2Q9P1W9 311 aa11.71□□□□□ -0.53
TPM1-210ENST00000558264 VAV3Q9UKW4 847 aa11.71□□□□□ -0.53
TPM1-210ENST00000558264 ABCB11O95342 1321 aa11.71□□□□□ -0.53
TPM1-210ENST00000558264 IGLV3-22A0A075B6J6 115 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 GCOM1H8Y6P7 765 aaPredicted RBP11.71□□□□□ -0.54
TPM1-210ENST00000558264 ENC1O14682 589 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 POLR2MP0CAP2 368 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 MMP14P50281 582 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 LRRC63Q05C16 580 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 COBLL1Q53SF7 1204 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 PRAMEF18Q5VWM3 479 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 CIAPIN1Q6FI81 312 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 TRMT1LQ7Z2T5 733 aaKnown RBP11.71□□□□□ -0.54
TPM1-210ENST00000558264 LDHDQ86WU2 507 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 TPH2Q8IWU9 490 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 ZNF397Q8NF99 534 aaPredicted RBP11.71□□□□□ -0.54
TPM1-210ENST00000558264 EIF2AK1Q9BQI3 630 aaKnown RBP11.71□□□□□ -0.54
TPM1-210ENST00000558264 RUSC1Q9BVN2 902 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 DNM3Q9UQ16 869 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 PCDHA2Q9Y5H9 948 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 GJA3Q9Y6H8 435 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 DUSP10Q9Y6W6 482 aa11.71□□□□□ -0.54
TPM1-210ENST00000558264 RCCD1A6NED2 376 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 MYBP10242 640 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 MAN2A1Q16706 1144 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 TBC1D10BQ4KMP7 808 aaPredicted RBP11.7□□□□□ -0.54
TPM1-210ENST00000558264 ERMNQ8TAM6 284 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 JDP2Q8WYK2 163 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 ZBTB9Q96C00 473 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 NHEJ1Q9H9Q4 299 aaPredicted RBP11.7□□□□□ -0.54
TPM1-210ENST00000558264 NLRC4Q9NPP4 1024 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 EMILIN3Q9NT22 766 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 COL2A1P02458 1487 aaPredicted RBP11.7□□□□□ -0.54
TPM1-210ENST00000558264 PRPF6O94906 941 aaKnown RBP11.7□□□□□ -0.54
TPM1-210ENST00000558264 ARP10275 920 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 RPA1P27694 616 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 RASSF7Q02833 373 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 PSMD2Q13200 908 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 GIT2Q14161 759 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 ZCWPW2Q504Y3 356 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 LRCH2Q5VUJ6 765 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 MOXD1Q6UVY6 613 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 AGBL3Q8NEM8 1001 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 DYDC2Q96IM9 177 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 ERGIC2Q96RQ1 377 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 LACRTQ9GZZ8 138 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 TAOK3Q9H2K8 898 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 RANBP17Q9H2T7 1088 aaKnown RBP11.7□□□□□ -0.54
TPM1-210ENST00000558264 ZNF446Q9NWS9 450 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 BCS1LQ9Y276 419 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 SIK3Q9Y2K2 1263 aa11.7□□□□□ -0.54
TPM1-210ENST00000558264 NFIBO00712 420 aa11.69□□□□□ -0.54
TPM1-210ENST00000558264 ZBED6P86452 979 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms