RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 C1orf54Q8WWF1 131 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 AGRPO00253 132 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 LMNB2Q03252 620 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 TTC26A0AVF1 554 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 GFPT2O94808 682 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 TRIM65Q6PJ69 517 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ZSCAN18Q8TBC5 510 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 TMA7Q9Y2S6 64 aaKnown RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 M0R3G1 203 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 TRHP20396 242 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 NAB2Q15742 525 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 WASHC2DQ5SRD0 308 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 APLFQ8IW19 511 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 PRPF18Q99633 342 aaKnown RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 SH3BP1Q9Y3L3 701 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ANKRD30BQ9BXX2 1392 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 HDAC7Q8WUI4 952 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 PLGRKTQ9HBL7 147 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 DIS3Q9Y2L1 958 aaKnown RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 PRDM1O75626 825 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 PHBP35232 272 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 BPIFB4P59827 614 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 PDXDC1Q6P996 788 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 GSPT2Q8IYD1 628 aaKnown RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 CUEDC2Q9H467 287 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 MIA2Q96PC5 1412 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ATP6V1B1P15313 513 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 LZICQ8WZA0 190 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 PCDHA12Q9UN75 941 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 PDCD2Q16342 344 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 KYNUQ16719 465 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 SAP30BPQ9UHR5 308 aaKnown RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 PCP4L1A6NKN8 68 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 PPP6R2O75170 966 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ARHGAP26Q9UNA1 814 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 AFG3L2Q9Y4W6 797 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 PPP1R2P41236 205 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 SPATA21Q7Z572 469 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 EGFL6Q8IUX8 553 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 FMR1NBQ8N0W7 255 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ZBED2Q9BTP6 218 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 TRABDQ9H4I3 376 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 NAALADL1Q9UQQ1 740 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ZCCHC6Q5VYS8 1495 aaKnown RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 PPP1R37O75864 691 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 RTN3O95197 1032 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ACAP1Q15027 740 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ACCSLQ4AC99 568 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ADNPQ9H2P0 1102 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 UPP2O95045 317 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 CYLDQ9NQC7 956 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ZSWIM5Q9P217 1185 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 C3orf62Q6ZUJ4 267 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 SGSM3Q96HU1 749 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 AP1B1Q10567 949 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ATG16L1Q676U5 607 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ANKRD40Q6AI12 368 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 TRIM74Q86UV6 250 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 TRIM73Q86UV7 250 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 RNF25Q96BH1 459 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 MCM9Q9NXL9 1143 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 STK10O94804 968 aaKnown RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 TMEM87AQ8NBN3 555 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 HOOK2Q96ED9 719 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 UNC45AQ9H3U1 944 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ANGEL1Q9UNK9 670 aaKnown RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 BRAFP15056 766 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 KIF23Q02241 960 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 MAGEC3Q8TD91 643 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 DBNDD2Q9BQY9 259 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ROPN1BQ9BZX4 212 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ROPN1Q9HAT0 212 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 CHPF2Q9P2E5 772 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 HEY2Q9UBP5 337 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 CALB2P22676 271 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 TFAP4Q01664 338 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ZMYM3Q14202 1370 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 FLOT2Q14254 428 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 HES6Q96HZ4 224 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 LRPPRCP42704 1394 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 NOA1Q8NC60 698 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 ITGB1BP2Q9UKP3 347 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 ADCY6O43306 1168 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 SNX16P57768 344 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 TNNI3KQ59H18 835 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 LRRN4CLQ8ND94 238 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 EZH1Q92800 747 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 HEXIM2Q96MH2 286 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 FPGT-TNNI3KV9GXZ4 949 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 ATP9AO75110 1047 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 AFAP1L2Q8N4X5 818 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 NT5C3AQ9H0P0 336 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 PACSIN2Q9UNF0 486 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 PRPF6O94906 941 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 SERPINB3P29508 390 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 TMPRSS15P98073 1019 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 RAD9BQ6WBX8 426 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 SFR1Q86XK3 245 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 RBBP8NLQ8NC74 664 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms