RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 SP4Q02446 784 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 RBL2Q08999 1139 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 FUT2Q10981 343 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 PTK7Q13308 1070 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 ADGRE1Q14246 886 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 NEDD9Q14511 834 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 KRT32Q14532 448 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 RTN1Q16799 776 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 TCTN1Q2MV58 587 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 WWC2Q6AWC2 1192 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 TYW1BQ6NUM6 668 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 XRRA1Q6P2D8 792 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 TRAF7Q6Q0C0 670 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 LRRC8DQ7L1W4 858 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 TUT1Q9H6E5 874 aaKnown RBP11.19□□□□□ -0.62
GCN1-208ENST00000551549 SLC28A3Q9HAS3 691 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 FAM217BQ9NTX9 383 aaPredicted RBP11.19□□□□□ -0.62
GCN1-208ENST00000551549 RBM28Q9NW13 759 aaKnown RBP11.19□□□□□ -0.62
GCN1-208ENST00000551549 V9GY48 417 aaPredicted RBP11.19□□□□□ -0.62
GCN1-208ENST00000551549 TET1Q8NFU7 2136 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 SCN5AQ14524 2016 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 KLF18A0A0U1RQI7 1052 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 ATP9AO75110 1047 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 CXCL10P02778 98 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 SMIM10L2AP0DMW4 78 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 SMIM10L2BP0DMW5 78 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 CDC27P30260 824 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 MBTPS1Q14703 1052 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 ZNF618Q5T7W0 954 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 UTP14CQ5TAP6 766 aaKnown RBP11.18□□□□□ -0.62
GCN1-208ENST00000551549 PPP2R2DQ66LE6 453 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 NLRX1Q86UT6 975 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 TRIM50Q86XT4 487 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 KCNB2Q92953 911 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 SENP7Q9BQF6 1050 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 NAP1L2Q9ULW6 460 aaPredicted RBP11.18□□□□□ -0.62
GCN1-208ENST00000551549 PCDHA6Q9UN73 950 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 PCDHA8Q9Y5H6 950 aa11.18□□□□□ -0.62
GCN1-208ENST00000551549 C17orf102A2RUQ5 167 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 SPDYE3A6NKU9 549 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 GOLGA8AA7E2F4 631 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 GOLGA8BA8MQT2 603 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 STXBP3O00186 592 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 TREHO43280 583 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 ARHGEF15O94989 841 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 CA3P07451 260 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 HMGB1P09429 215 aaKnown RBP11.17□□□□□ -0.62
GCN1-208ENST00000551549 KCNA2P16389 499 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 HOXC8P31273 242 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 ADD1P35611 737 aaKnown RBP11.17□□□□□ -0.62
GCN1-208ENST00000551549 THPOP40225 353 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 NAPAP54920 295 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 APOBRQ0VD83 1088 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 TMCO2Q7Z6W1 182 aaPredicted RBP11.17□□□□□ -0.62
GCN1-208ENST00000551549 SERINC5Q86VE9 423 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 HERC6Q8IVU3 1022 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 PHOSPHO2Q8TCD6 241 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 PPM1EQ8WY54 764 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 ATP6V0A1Q93050 837 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 GPRASP2Q96D09 838 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 JAKMIP1Q96N16 626 aaKnown RBP11.17□□□□□ -0.62
GCN1-208ENST00000551549 GAS2L1Q99501 681 aaPredicted RBP11.17□□□□□ -0.62
GCN1-208ENST00000551549 USP26Q9BXU7 913 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 RNPEPQ9H4A4 650 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 SETD4Q9NVD3 440 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 PKD2L1Q9P0L9 805 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 SNX14Q9Y5W7 946 aa11.17□□□□□ -0.62
GCN1-208ENST00000551549 TRIP12Q14669 1992 aaPredicted RBP11.16□□□□□ -0.62
GCN1-208ENST00000551549 MYH7BA7E2Y1 1941 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 BAIAP3O94812 1187 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 PARNO95453 639 aaKnown RBP11.16□□□□□ -0.62
GCN1-208ENST00000551549 IGFBP4P22692 258 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 HSPA4P34932 840 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 WDR5P61964 334 aaKnown RBP11.16□□□□□ -0.62
GCN1-208ENST00000551549 DEFB103AP81534 67 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 FGD1P98174 961 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 CNKSR3Q6P9H4 555 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 Q6ZUG5 572 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 GIMAP8Q8ND71 665 aaPredicted RBP11.16□□□□□ -0.62
GCN1-208ENST00000551549 CYP2W1Q8TAV3 490 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 CDHR1Q96JP9 859 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 PGBD1Q96JS3 809 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 SLC9A7Q96T83 725 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 COL25A1Q9BXS0 654 aaPredicted RBP11.16□□□□□ -0.62
GCN1-208ENST00000551549 CERS4Q9HA82 394 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 RIC8AQ9NPQ8 531 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 JADE2Q9NQC1 790 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 PRDM6Q9NQX0 595 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 UBIAD1Q9Y5Z9 338 aa11.16□□□□□ -0.62
GCN1-208ENST00000551549 BDP1A6H8Y1 2624 aa11.15□□□□□ -0.62
GCN1-208ENST00000551549 GSTTP1A0A1W2PQM5 241 aa11.15□□□□□ -0.62
GCN1-208ENST00000551549 SMCO2A6NFE2 343 aa11.15□□□□□ -0.62
GCN1-208ENST00000551549 EPOPA6NHQ4 379 aa11.15□□□□□ -0.62
GCN1-208ENST00000551549 RSPH10B2B2RC85 870 aa11.15□□□□□ -0.62
GCN1-208ENST00000551549 RFXAPO00287 272 aa11.15□□□□□ -0.62
GCN1-208ENST00000551549 RSPH10BP0C881 870 aa11.15□□□□□ -0.62
GCN1-208ENST00000551549 TCF7P36402 384 aaPredicted RBP11.15□□□□□ -0.62
GCN1-208ENST00000551549 KCNJ6P48051 423 aa11.15□□□□□ -0.62
GCN1-208ENST00000551549 METAP2P50579 478 aaKnown RBP eCLIP11.15□□□□□ -0.62
GCN1-208ENST00000551549 ADCY7P51828 1080 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms