RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 LGR6Q9HBX8 967 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 OBP2AQ9NY56 170 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 ZKSCAN5Q9Y2L8 839 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 METP08581 1390 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 PIK3R4Q99570 1358 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 C2orf71A6NGG8 1288 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 ULK1O75385 1050 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 GSNP06396 782 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 CELA2BP08218 269 aaPredicted RBP7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 MYBL2P10244 700 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 ATP2A2P16615 1042 aaKnown RBP7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 RXRBP28702 533 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 VPS72Q15906 364 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 TMEM177Q53S58 311 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 LYPD4Q6UWN0 246 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 SEZ6L2Q6UXD5 910 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 DTWD2Q8NBA8 298 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 EZH1Q92800 747 aaPredicted RBP7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 CABP5Q9NP86 173 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 THG1LQ9NWX6 298 aaKnown RBP7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 BACE2Q9Y5Z0 518 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 LAMC1P11047 1609 aa7.87□□□□□ -1.15
TGFBR1-208ENST00000550253 MEIS1O00470 390 aa7.86□□□□□ -1.15
TGFBR1-208ENST00000550253 MEFVO15553 781 aaPredicted RBP7.86□□□□□ -1.15
TGFBR1-208ENST00000550253 NFICP08651 508 aa7.86□□□□□ -1.15
TGFBR1-208ENST00000550253 CYP7A1P22680 504 aa7.86□□□□□ -1.15
TGFBR1-208ENST00000550253 PAK1Q13153 545 aa7.86□□□□□ -1.15
TGFBR1-208ENST00000550253 E4F1Q66K89 784 aaPredicted RBP7.86□□□□□ -1.15
TGFBR1-208ENST00000550253 CHST14Q8NCH0 376 aa7.86□□□□□ -1.15
TGFBR1-208ENST00000550253 FCRL3Q96P31 734 aaPredicted RBP7.86□□□□□ -1.15
TGFBR1-208ENST00000550253 DCCP43146 1447 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 CLTCL1P53675 1640 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 VSTM5A8MXK1 200 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 WNT9AO14904 365 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 CD3EP07766 207 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 SRGAP2CP0DJJ0 459 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 U2AF1L5P0DN76 240 aaPredicted RBP7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 LCP1P13796 627 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 YBX3P16989 372 aaKnown RBP eCLIP7.85□□□□□ -1.153e-8■■□□□ 14.3
TGFBR1-208ENST00000550253 LTBRP36941 435 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 GRIK1P39086 918 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 USP11P51784 963 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 U2AF1Q01081 240 aaKnown RBP eCLIP7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 OCRLQ01968 901 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 NMIQ13287 307 aaPredicted RBP7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 KLF1Q13351 362 aaPredicted RBP7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 BRD3Q15059 726 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 CRTC3Q6UUV7 619 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 OVCH1Q7RTY7 1134 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 CPA6Q8N4T0 437 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 CLRN3Q8NCR9 226 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 IL17RAQ96F46 866 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 AHCYL2Q96HN2 611 aaKnown RBP7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 COX4I2Q96KJ9 171 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 IRX2Q9BZI1 471 aaPredicted RBP7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 NEXMIFQ5QGS0 1516 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 PNPLA6Q8IY17 1366 aa7.85□□□□□ -1.15
TGFBR1-208ENST00000550253 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 SHISA3A0PJX4 238 aa7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 SNUPNO95149 360 aaKnown RBP7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 MT-CO1P00395 513 aa7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 IFNGR1P15260 489 aa7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 ELNP15502 786 aa7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 PCBP2Q15366 365 aaKnown RBP eCLIP7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 CREB3L3Q68CJ9 461 aa7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 CWF19L1Q69YN2 538 aaKnown RBP7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 FBLIM1Q8WUP2 373 aa7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 ALG1Q9BT22 464 aa7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 KCNH3Q9ULD8 1083 aa7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 PNMA8BQ9ULN7 279 aaPredicted RBP7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 TPX2Q9ULW0 747 aaKnown RBP7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 ANKRD6Q9Y2G4 727 aa7.84□□□□□ -1.15
TGFBR1-208ENST00000550253 ALX3O95076 343 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 PLS3P13797 630 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 CCND1P24385 295 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 KPNA1P52294 538 aaPredicted RBP7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 PURAQ00577 322 aaKnown RBP7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 CDK5R2Q13319 367 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 C4orf46Q504U0 113 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 TMEM240Q5SV17 173 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 LINC00114Q6XXX2 140 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 Q6ZS46 218 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 HDGFL2Q7Z4V5 671 aaPredicted RBP7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 C11orf74Q86VG3 221 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 TOP6BLQ8N6T0 577 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 C1orf162Q8NEQ5 155 aaPredicted RBP7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 EVI5LQ96CN4 794 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 PLVAPQ9BX97 442 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 HDAC8Q9BY41 377 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 ADGRL3Q9HAR2 1447 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 COL22A1Q8NFW1 1626 aaPredicted RBP7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 PTPDC1A2A3K4 754 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 FAM229AH3BQW9 127 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 CT47B1P0C2W7 299 aaPredicted RBP7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 PF4V1P10720 104 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 TRIM27P14373 513 aa7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 RECQLP46063 649 aaPredicted RBP7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 NOP2P46087 812 aaKnown RBP7.83□□□□□ -1.16
TGFBR1-208ENST00000550253 SESN3P58005 492 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms