RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 HSPA1LP34931 641 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 TBX2Q13207 712 aaPredicted RBP8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 ODR4Q5SWX8 454 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 CDKAL1Q5VV42 579 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 CEP95Q96GE4 821 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 AP1M1Q9BXS5 423 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 TMEM60Q9H2L4 133 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 ZNF446Q9NWS9 450 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 KNDC1Q76NI1 1749 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 MON2Q7Z3U7 1717 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 ESYT3A0FGR9 886 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 USP17L5A8MUK1 530 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 NCK2O43639 380 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 PSMC2P35998 433 aaKnown RBP8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 ICA1Q05084 483 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 NAA25Q14CX7 972 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 PPP4R3CPQ6ZMV5 832 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 FAM186BQ8IYM0 893 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 CEP63Q96MT8 703 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 TRIM7Q9C029 511 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 IQCGQ9H095 443 aaKnown RBP8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 SYNCQ9H7C4 482 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 CNTNAP5Q8WYK1 1306 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 TRIM66O15016 1216 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 GFPT2O94808 682 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 PLTPP55058 493 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 KCNH2Q12809 1159 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 SBK1Q52WX2 424 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 MUM1L1Q5H9M0 696 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 INTS8Q75QN2 995 aaKnown RBP8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 SH2D4AQ9H788 454 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 HOMER2Q9NSB8 354 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 TMEM260Q9NX78 707 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 EXOC7Q9UPT5 735 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 LTBP4Q8N2S1 1624 aa8.96□□□□□ -0.98
PRKAB1-207ENST00000542698 FAM237AA0A1B0GTK4 181 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 CCDC188H7C350 402 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 FGFR2P21802 821 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 BMP6P22004 513 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 SP4Q02446 784 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 ORC2Q13416 577 aaPredicted RBP8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 CUL1Q13616 776 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 SEC23AQ15436 765 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 KIAA0825Q8IV33 1275 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 MSANTD4Q8NCY6 345 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 RAD54LQ92698 747 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 GCNT4Q9P109 453 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 NOVA2Q9UNW9 492 aaKnown RBP8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 DLG5Q8TDM6 1919 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 BBOX1O75936 387 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 VSIG1Q86XK7 387 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 NEDD1Q8NHV4 660 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 MGARPQ8TDB4 240 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 C7orf25Q9BPX7 421 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 INTS9Q9NV88 658 aaKnown RBP8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 TFR2Q9UP52 801 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 MEGF6O75095 1541 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 BACH1O14867 736 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 CTNND1O60716 968 aaKnown RBP8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 PRPF6O94906 941 aaKnown RBP8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 ZRANB2O95218 330 aaKnown RBP eCLIP8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 GRAPQ13588 217 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 MESDQ14696 234 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 SF3B3Q15393 1217 aaKnown RBP8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 E2F4Q16254 413 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 DOK7Q18PE1 504 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 WDR93Q6P2C0 686 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 CPXCR1Q8N123 301 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 PPM1KQ8N3J5 372 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 GRAPLQ8TC17 118 aaPredicted RBP8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 CHURC1Q8WUH1 139 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 IWS1Q96ST2 819 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 KANSL2Q9H9L4 492 aa8.95□□□□□ -0.98
PRKAB1-207ENST00000542698 CACNA1FO60840 1977 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 TCRBV5S4A2TA0A5A2 114 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 E9PMD0 336 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 TDP2O95551 362 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 COASYQ13057 564 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 ANKRD42Q8N9B4 389 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 FMO2Q99518 471 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 SPZ1Q9BXG8 430 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 BHMT2Q9H2M3 363 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 PRM3Q9NNZ6 103 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 PLAAQ9Y263 795 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 CEP83Q9Y592 693 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 GAP43P17677 238 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 ATP11AP98196 1134 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 MDM2Q00987 491 aaPredicted RBP8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 PDIA5Q14554 519 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 PKN1Q16512 942 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 C6orf163Q5TEZ5 329 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 LIN9Q5TKA1 542 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 CEP128Q6ZU80 1094 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 MAIP1Q8WWC4 291 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 KIFC2Q96AC6 838 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 GPR101Q96P66 508 aaPredicted RBP8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 HPCAL4Q9UM19 191 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 PLAGL2Q9UPG8 496 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 AKAP12Q02952 1782 aa8.94□□□□□ -0.98
PRKAB1-207ENST00000542698 PDS5AQ29RF7 1337 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms