RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 MOCS3O95396 460 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 EHHADHQ08426 723 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 CDC37Q16543 378 aaPredicted RBP12.77□□□□□ -0.37
C11orf54-214ENST00000540113 MAN2A1Q16706 1144 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 COBLL1Q53SF7 1204 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 RETREG2Q8NC44 543 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 NEK11Q8NG66 645 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 BCAS3Q9H6U6 928 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 JADE2Q9NQC1 790 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 CAPN6Q9Y6Q1 641 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 POTEFA5A3E0 1075 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 MAP2K7O14733 419 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 ATP8B1O43520 1251 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 MED24O75448 989 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 POTEIP0CG38 1075 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 PSMC6P62333 389 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 ICA1Q05084 483 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 KCNMA1Q12791 1236 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 ENOX2Q16206 610 aaKnown RBP12.77□□□□□ -0.37
C11orf54-214ENST00000540113 POTEGQ6S5H5 508 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 POTEEQ6S8J3 1075 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 GSPT2Q8IYD1 628 aaKnown RBP12.77□□□□□ -0.37
C11orf54-214ENST00000540113 MYOCDQ8IZQ8 938 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 SMARCAL1Q9NZC9 954 aa12.77□□□□□ -0.37
C11orf54-214ENST00000540113 ATRNL1Q5VV63 1379 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 KIF11P52732 1056 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 GFPT1Q06210 699 aaPredicted RBP12.76□□□□□ -0.37
C11orf54-214ENST00000540113 C2orf54Q08AI8 447 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 IKQ13123 557 aaPredicted RBP12.76□□□□□ -0.37
C11orf54-214ENST00000540113 TUBB2AQ13885 445 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 CCDC40Q4G0X9 1142 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 GPBP1Q86WP2 473 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 CCDC170Q8IYT3 715 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 CAGE1Q8TC20 777 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 CNKSR1Q969H4 720 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 PRMT6Q96LA8 375 aaPredicted RBP12.76□□□□□ -0.37
C11orf54-214ENST00000540113 TUBB2BQ9BVA1 445 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 ANO3Q9BYT9 981 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 IFIH1Q9BYX4 1025 aaKnown RBP12.76□□□□□ -0.37
C11orf54-214ENST00000540113 DEF6Q9H4E7 631 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 EHD2Q9NZN4 543 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 L1RE1Q9UN81 338 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 PLAGL2Q9UPG8 496 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 PCDHA13Q9Y5I0 950 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 A0A1W2PQJ5 194 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 NDUFB10O96000 172 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 PLA2G4BP0C869 781 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 CXCR5P32302 372 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 PPP1R2P41236 205 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 VAV2P52735 878 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 KIF5AQ12840 1032 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 SPA17Q15506 151 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 PRR16Q569H4 304 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 HERC4Q5GLZ8 1057 aaPredicted RBP12.76□□□□□ -0.37
C11orf54-214ENST00000540113 FAM26FQ5R3K3 315 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 PAPD7Q5XG87 772 aaKnown RBP12.76□□□□□ -0.37
C11orf54-214ENST00000540113 TMEM179Q6ZVK1 233 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 DEFB132Q7Z7B7 95 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 SPICE1Q8N0Z3 855 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 SECISBP2LQ93073 1101 aaKnown RBP12.76□□□□□ -0.37
C11orf54-214ENST00000540113 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.76□□□□□ -0.37
C11orf54-214ENST00000540113 SALL4Q9UJQ4 1053 aa12.76□□□□□ -0.37
C11orf54-214ENST00000540113 COL4A5P29400 1685 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 LRRIQ3A6PVS8 624 aaPredicted RBP12.75□□□□□ -0.37
C11orf54-214ENST00000540113 F5H6K3 240 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 MEIS2O14770 477 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 NCK2O43639 380 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 AKR1B10O60218 316 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 PHACTR2O75167 634 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 HOXA13P31271 388 aaPredicted RBP12.75□□□□□ -0.37
C11orf54-214ENST00000540113 ARID5AQ03989 594 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 LRRC63Q05C16 580 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 KLRC3Q07444 240 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 ABCB5Q2M3G0 1257 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 CCDC125Q86Z20 511 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 BAP1Q92560 729 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 ZFP91Q96JP5 570 aaPredicted RBP12.75□□□□□ -0.37
C11orf54-214ENST00000540113 TSG101Q99816 390 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 TRIM34Q9BYJ4 488 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 MYH10P35580 1976 aa12.75□□□□□ -0.37
C11orf54-214ENST00000540113 BUB1O43683 1085 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 KRT18P05783 430 aaKnown RBP12.74□□□□□ -0.37
C11orf54-214ENST00000540113 GCFC2P16383 781 aaKnown RBP12.74□□□□□ -0.37
C11orf54-214ENST00000540113 CYP2C19P33261 490 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 CASP5P51878 434 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 ARSHQ5FYA8 562 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 FIGNQ5HY92 759 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 HDXQ7Z353 690 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 CACNA2D4Q7Z3S7 1137 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 GMCL1P1Q8NEA9 526 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 CYP2W1Q8TAV3 490 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 HNRNPLLQ8WVV9 542 aaKnown RBP12.74□□□□□ -0.37
C11orf54-214ENST00000540113 CRYGNQ8WXF5 182 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 KCNMB3Q9NPA1 279 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 SMCHD1A6NHR9 2005 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 ENTPD3O75355 529 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 ERLIN1O75477 346 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 GH2P01242 217 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 CYP11B2P19099 503 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms