RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 GDF6Q6KF10 455 aaPredicted RBP19.68■□□□□ 0.74
SFSWAP-205ENST00000537164 PSRC1Q6PGN9 363 aaPredicted RBP19.68■□□□□ 0.74
SFSWAP-205ENST00000537164 CRYGNQ8WXF5 182 aa19.68■□□□□ 0.74
SFSWAP-205ENST00000537164 VWCEQ96DN2 955 aa19.68■□□□□ 0.74
SFSWAP-205ENST00000537164 GPR20Q99678 358 aa19.68■□□□□ 0.74
SFSWAP-205ENST00000537164 HOXC8P31273 242 aa19.67■□□□□ 0.74
SFSWAP-205ENST00000537164 SMAD3P84022 425 aaKnown RBP19.67■□□□□ 0.74
SFSWAP-205ENST00000537164 RBL2Q08999 1139 aa19.67■□□□□ 0.74
SFSWAP-205ENST00000537164 MTMR1Q13613 665 aa19.67■□□□□ 0.74
SFSWAP-205ENST00000537164 PTGISQ16647 500 aa19.67■□□□□ 0.74
SFSWAP-205ENST00000537164 C7orf31Q8N865 590 aa19.67■□□□□ 0.74
SFSWAP-205ENST00000537164 PPP1R13LQ8WUF5 828 aa19.67■□□□□ 0.74
SFSWAP-205ENST00000537164 RNPC3Q96LT9 517 aaKnown RBP19.67■□□□□ 0.74
SFSWAP-205ENST00000537164 MXRA8Q9BRK3 442 aa19.67■□□□□ 0.74
SFSWAP-205ENST00000537164 C6orf50Q9HD87 102 aa19.67■□□□□ 0.74
SFSWAP-205ENST00000537164 SH3GLB2Q9NR46 395 aa19.67■□□□□ 0.74
SFSWAP-205ENST00000537164 HDAC6Q9UBN7 1215 aa19.67■□□□□ 0.74
SFSWAP-205ENST00000537164 SCN5AQ14524 2016 aa19.67■□□□□ 0.74
SFSWAP-205ENST00000537164 H3BRB1 525 aa19.66■□□□□ 0.74
SFSWAP-205ENST00000537164 NOP56O00567 594 aaKnown RBP19.66■□□□□ 0.74
SFSWAP-205ENST00000537164 SORBS3O60504 671 aa19.66■□□□□ 0.74
SFSWAP-205ENST00000537164 LGALS2P05162 132 aa19.66■□□□□ 0.74
SFSWAP-205ENST00000537164 GNA11P29992 359 aa19.66■□□□□ 0.74
SFSWAP-205ENST00000537164 CCL23P55773 120 aa19.66■□□□□ 0.74
SFSWAP-205ENST00000537164 AKAP17AQ02040 695 aaKnown RBP19.66■□□□□ 0.74
SFSWAP-205ENST00000537164 CAGE1Q8TC20 777 aa19.66■□□□□ 0.74
SFSWAP-205ENST00000537164 SLC26A6Q9BXS9 759 aa19.66■□□□□ 0.74
SFSWAP-205ENST00000537164 TUT1Q9H6E5 874 aaKnown RBP19.66■□□□□ 0.74
SFSWAP-205ENST00000537164 KCNH7Q9NS40 1196 aa19.66■□□□□ 0.74
SFSWAP-205ENST00000537164 TMEM260Q9NX78 707 aa19.66■□□□□ 0.74
SFSWAP-205ENST00000537164 MEIS1O00470 390 aa19.65■□□□□ 0.74
SFSWAP-205ENST00000537164 PFKMP08237 780 aa19.65■□□□□ 0.74
SFSWAP-205ENST00000537164 CYP3A4P08684 503 aa19.65■□□□□ 0.74
SFSWAP-205ENST00000537164 BFSP2Q13515 415 aa19.65■□□□□ 0.74
SFSWAP-205ENST00000537164 CEP55Q53EZ4 464 aa19.65■□□□□ 0.74
SFSWAP-205ENST00000537164 ZNF365Q70YC5 407 aa19.65■□□□□ 0.74
SFSWAP-205ENST00000537164 NIPA1Q7RTP0 329 aa19.65■□□□□ 0.74
SFSWAP-205ENST00000537164 RPUSD2Q8IZ73 545 aaKnown RBP19.65■□□□□ 0.74
SFSWAP-205ENST00000537164 FAM177A1Q8N128 213 aaPredicted RBP19.65■□□□□ 0.74
SFSWAP-205ENST00000537164 CCDC148Q8NFR7 591 aa19.65■□□□□ 0.74
SFSWAP-205ENST00000537164 PGBD1Q96JS3 809 aa19.65■□□□□ 0.74
SFSWAP-205ENST00000537164 ALG1Q9BT22 464 aa19.65■□□□□ 0.74
SFSWAP-205ENST00000537164 CDH23Q9H251 3354 aa19.65■□□□□ 0.74
SFSWAP-205ENST00000537164 ADAMTS3O15072 1205 aa19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 SEC24BO95487 1268 aa19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 RFC2P35250 354 aa19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 CHMP4BP1P59074 171 aa19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 ARHGAP4P98171 946 aa19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 TRIM22Q8IYM9 498 aa19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 REXO1Q8N1G1 1221 aaKnown RBP19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 CCDC155Q8N6L0 562 aa19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 CYP2W1Q8TAV3 490 aa19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 BICD2Q8TD16 824 aa19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 HERVK_113Q902F9 699 aa19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 SCLYQ96I15 445 aa19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 LARP6Q9BRS8 491 aaKnown RBP19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 NOD1Q9Y239 953 aa19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 TELO2Q9Y4R8 837 aa19.64■□□□□ 0.73
SFSWAP-205ENST00000537164 NFASCO94856 1347 aa19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 CPLX1O14810 134 aa19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 DEXIO95424 95 aa19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 FGBP02675 491 aa19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 IQCF3P0C7M6 154 aa19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 ACRP10323 421 aa19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 SSRP1Q08945 709 aaKnown RBP19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 PTK7Q13308 1070 aa19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 HIC1Q14526 733 aa19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 ANKRD1Q15327 319 aa19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 JAKMIP3Q5VZ66 844 aa19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 AFAP1L1Q8TED9 768 aa19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 DHX38Q92620 1227 aaKnown RBP19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 TPCN1Q9ULQ1 816 aa19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 TET1Q8NFU7 2136 aa19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 KAT6AQ92794 2004 aa19.63■□□□□ 0.73
SFSWAP-205ENST00000537164 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.62■□□□□ 0.73
SFSWAP-205ENST00000537164 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.62■□□□□ 0.73
SFSWAP-205ENST00000537164 GSTTP1A0A1W2PQM5 241 aa19.62■□□□□ 0.73
SFSWAP-205ENST00000537164 PFKFB2O60825 505 aa19.62■□□□□ 0.73
SFSWAP-205ENST00000537164 SCRN1Q12765 414 aa19.62■□□□□ 0.73
SFSWAP-205ENST00000537164 TRIM71Q2Q1W2 868 aaKnown RBP19.62■□□□□ 0.73
SFSWAP-205ENST00000537164 CPLX2Q6PUV4 134 aaKnown RBP19.62■□□□□ 0.73
SFSWAP-205ENST00000537164 DEFB123Q8N688 67 aa19.62■□□□□ 0.73
SFSWAP-205ENST00000537164 RETREG2Q8NC44 543 aa19.62■□□□□ 0.73
SFSWAP-205ENST00000537164 SEPT1Q8WYJ6 367 aa19.62■□□□□ 0.73
SFSWAP-205ENST00000537164 VPS54Q9P1Q0 977 aa19.62■□□□□ 0.73
SFSWAP-205ENST00000537164 ZNF215Q9UL58 517 aaPredicted RBP19.62■□□□□ 0.73
SFSWAP-205ENST00000537164 IGLV3-22A0A075B6J6 115 aa19.61■□□□□ 0.73
SFSWAP-205ENST00000537164 FAM86B1E9PN63 330 aa19.61■□□□□ 0.73
SFSWAP-205ENST00000537164 PPFIA3O75145 1194 aa19.61■□□□□ 0.73
SFSWAP-205ENST00000537164 PARNO95453 639 aaKnown RBP19.61■□□□□ 0.73
SFSWAP-205ENST00000537164 FAM86B2P0C5J1 330 aa19.61■□□□□ 0.73
SFSWAP-205ENST00000537164 ARP10275 920 aa19.61■□□□□ 0.73
SFSWAP-205ENST00000537164 TCF7P36402 384 aaPredicted RBP19.61■□□□□ 0.73
SFSWAP-205ENST00000537164 AK2P54819 239 aa19.61■□□□□ 0.73
SFSWAP-205ENST00000537164 STK3Q13188 491 aa19.61■□□□□ 0.73
SFSWAP-205ENST00000537164 SERINC5Q86VE9 423 aa19.61■□□□□ 0.73
SFSWAP-205ENST00000537164 RNPEPQ9H4A4 650 aa19.61■□□□□ 0.73
SFSWAP-205ENST00000537164 AGO4Q9HCK5 861 aaKnown RBP19.61■□□□□ 0.73
SFSWAP-205ENST00000537164 EMSYQ7Z589 1322 aa19.6■□□□□ 0.73
SFSWAP-205ENST00000537164 TMEM265A0A087WTH1 108 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms