RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 ZBTB5O15062 677 aa24.46■■□□□ 1.51
CHKA-206ENST00000531341 NT5C2P49902 561 aa24.46■■□□□ 1.51
CHKA-206ENST00000531341 GPM6BQ13491 265 aa24.46■■□□□ 1.51
CHKA-206ENST00000531341 SEC23AQ15436 765 aa24.46■■□□□ 1.51
CHKA-206ENST00000531341 IFIT1BQ5T764 474 aaKnown RBP24.46■■□□□ 1.51
CHKA-206ENST00000531341 KCNV1Q6PIU1 500 aa24.46■■□□□ 1.51
CHKA-206ENST00000531341 CYB5R4Q7L1T6 521 aa24.46■■□□□ 1.51
CHKA-206ENST00000531341 FCHSD1Q86WN1 690 aa24.46■■□□□ 1.51
CHKA-206ENST00000531341 PLEKHM2Q8IWE5 1019 aa24.46■■□□□ 1.51
CHKA-206ENST00000531341 BANK1Q8NDB2 785 aa24.46■■□□□ 1.51
CHKA-206ENST00000531341 YME1L1Q96TA2 773 aa24.46■■□□□ 1.51
CHKA-206ENST00000531341 MYH6P13533 1939 aa24.45■■□□□ 1.51
CHKA-206ENST00000531341 LGALS2P05162 132 aa24.45■■□□□ 1.5
CHKA-206ENST00000531341 ALYREFQ86V81 257 aaKnown RBP24.45■■□□□ 1.5
CHKA-206ENST00000531341 HOMER1Q86YM7 354 aa24.45■■□□□ 1.5
CHKA-206ENST00000531341 TMEM192Q8IY95 271 aa24.45■■□□□ 1.5
CHKA-206ENST00000531341 IL25Q9H293 177 aa24.45■■□□□ 1.5
CHKA-206ENST00000531341 MAP3K20Q9NYL2 800 aaKnown RBP24.45■■□□□ 1.5
CHKA-206ENST00000531341 CTNNA3Q9UI47 895 aa24.45■■□□□ 1.5
CHKA-206ENST00000531341 PALM3A6NDB9 673 aaPredicted RBP24.44■■□□□ 1.5
CHKA-206ENST00000531341 TGFB3P10600 412 aa24.44■■□□□ 1.5
CHKA-206ENST00000531341 MRPS9P82933 396 aaKnown RBP24.44■■□□□ 1.5
CHKA-206ENST00000531341 PTPROQ16827 1216 aa24.44■■□□□ 1.5
CHKA-206ENST00000531341 IMMTQ16891 758 aaKnown RBP24.44■■□□□ 1.5
CHKA-206ENST00000531341 SEPT8Q92599 483 aa24.44■■□□□ 1.5
CHKA-206ENST00000531341 PIGSQ96S52 555 aa24.44■■□□□ 1.5
CHKA-206ENST00000531341 UBAC1Q9BSL1 405 aa24.44■■□□□ 1.5
CHKA-206ENST00000531341 DSCC1Q9BVC3 393 aa24.44■■□□□ 1.5
CHKA-206ENST00000531341 SETD4Q9NVD3 440 aa24.44■■□□□ 1.5
CHKA-206ENST00000531341 SUPT16HQ9Y5B9 1047 aaKnown RBP24.44■■□□□ 1.5
CHKA-206ENST00000531341 CCND2P30279 289 aa24.43■■□□□ 1.5
CHKA-206ENST00000531341 SEMA3FQ13275 785 aa24.43■■□□□ 1.5
CHKA-206ENST00000531341 EP400NLQ6ZTU2 488 aa24.43■■□□□ 1.5
CHKA-206ENST00000531341 PABPC5Q96DU9 382 aaKnown RBP24.43■■□□□ 1.5
CHKA-206ENST00000531341 SAMD11Q96NU1 681 aa24.43■■□□□ 1.5
CHKA-206ENST00000531341 UIMC1Q96RL1 719 aa24.43■■□□□ 1.5
CHKA-206ENST00000531341 KRT23Q9C075 422 aa24.43■■□□□ 1.5
CHKA-206ENST00000531341 OSBPL3Q9H4L5 887 aa24.43■■□□□ 1.5
CHKA-206ENST00000531341 DIAPH3Q9NSV4 1193 aa24.43■■□□□ 1.5
CHKA-206ENST00000531341 GCOM1H8Y6P7 765 aaPredicted RBP24.42■■□□□ 1.5
CHKA-206ENST00000531341 POLR2MP0CAP2 368 aa24.42■■□□□ 1.5
CHKA-206ENST00000531341 COL19A1Q14993 1142 aa24.42■■□□□ 1.5
CHKA-206ENST00000531341 TRIM50Q86XT4 487 aa24.42■■□□□ 1.5
CHKA-206ENST00000531341 SENP2Q9HC62 589 aa24.42■■□□□ 1.5
CHKA-206ENST00000531341 MUC6Q6W4X9 2439 aa24.42■■□□□ 1.5
CHKA-206ENST00000531341 POTEB3A0JP26 581 aa24.41■■□□□ 1.5
CHKA-206ENST00000531341 CYTH3O43739 400 aa24.41■■□□□ 1.5
CHKA-206ENST00000531341 ALADP13716 330 aa24.41■■□□□ 1.5
CHKA-206ENST00000531341 PUS10Q3MIT2 529 aaKnown RBP24.41■■□□□ 1.5
CHKA-206ENST00000531341 TIGD5Q53EQ6 642 aa24.41■■□□□ 1.5
CHKA-206ENST00000531341 POTEBQ6S5H4 581 aa24.41■■□□□ 1.5
CHKA-206ENST00000531341 CYFIP1Q7L576 1253 aa24.41■■□□□ 1.5
CHKA-206ENST00000531341 SMC5Q8IY18 1101 aa24.41■■□□□ 1.5
CHKA-206ENST00000531341 GPR20Q99678 358 aa24.41■■□□□ 1.5
CHKA-206ENST00000531341 IFIH1Q9BYX4 1025 aaKnown RBP24.41■■□□□ 1.5
CHKA-206ENST00000531341 RTEL1Q9NZ71 1219 aa24.41■■□□□ 1.5
CHKA-206ENST00000531341 LINC00271P0C7V0 271 aa24.4■■□□□ 1.5
CHKA-206ENST00000531341 LTBRP36941 435 aa24.4■■□□□ 1.5
CHKA-206ENST00000531341 ADAM17P78536 824 aa24.4■■□□□ 1.5
CHKA-206ENST00000531341 ZP2Q05996 745 aa24.4■■□□□ 1.5
CHKA-206ENST00000531341 CHD1LQ86WJ1 897 aa24.4■■□□□ 1.5
CHKA-206ENST00000531341 SAMD3Q8N6K7 520 aa24.4■■□□□ 1.5
CHKA-206ENST00000531341 NSUN3Q9H649 340 aaKnown RBP24.4■■□□□ 1.5
CHKA-206ENST00000531341 RIOX1Q9H6W3 641 aa24.4■■□□□ 1.5
CHKA-206ENST00000531341 CNNM2Q9H8M5 875 aa24.4■■□□□ 1.5
CHKA-206ENST00000531341 NOP56O00567 594 aaKnown RBP24.39■■□□□ 1.49
CHKA-206ENST00000531341 IGHDP01880 384 aa24.39■■□□□ 1.49
CHKA-206ENST00000531341 USP26Q9BXU7 913 aa24.39■■□□□ 1.49
CHKA-206ENST00000531341 CLDND1Q9NY35 253 aa24.39■■□□□ 1.49
CHKA-206ENST00000531341 SPATA31C2B4DYI2 1134 aa24.38■■□□□ 1.49
CHKA-206ENST00000531341 DCXO43602 365 aa24.38■■□□□ 1.49
CHKA-206ENST00000531341 CAND2O75155 1236 aa24.38■■□□□ 1.49
CHKA-206ENST00000531341 CHRNA1P02708 482 aa24.38■■□□□ 1.49
CHKA-206ENST00000531341 ICAM3P32942 547 aa24.38■■□□□ 1.49
CHKA-206ENST00000531341 DLX2Q07687 328 aaPredicted RBP24.38■■□□□ 1.49
CHKA-206ENST00000531341 GRM4Q14833 912 aa24.38■■□□□ 1.49
CHKA-206ENST00000531341 UTP14CQ5TAP6 766 aaKnown RBP24.38■■□□□ 1.49
CHKA-206ENST00000531341 METTL7BQ6UX53 244 aa24.38■■□□□ 1.49
CHKA-206ENST00000531341 INPP4AQ96PE3 977 aaPredicted RBP24.38■■□□□ 1.49
CHKA-206ENST00000531341 COL4A6Q14031 1691 aa24.37■■□□□ 1.49
CHKA-206ENST00000531341 C19orf67A6NJJ6 358 aa24.37■■□□□ 1.49
CHKA-206ENST00000531341 GRM6O15303 877 aa24.37■■□□□ 1.49
CHKA-206ENST00000531341 ARHGAP4P98171 946 aa24.37■■□□□ 1.49
CHKA-206ENST00000531341 FAM26DQ5JW98 314 aa24.37■■□□□ 1.49
CHKA-206ENST00000531341 RPAINQ86UA6 219 aa24.37■■□□□ 1.49
CHKA-206ENST00000531341 IL17RAQ96F46 866 aa24.37■■□□□ 1.49
CHKA-206ENST00000531341 FRMPD4Q14CM0 1322 aa24.36■■□□□ 1.49
CHKA-206ENST00000531341 CTNNB1P35222 781 aa24.36■■□□□ 1.49
CHKA-206ENST00000531341 NUCB1Q02818 461 aa24.36■■□□□ 1.49
CHKA-206ENST00000531341 CLUL1Q15846 466 aa24.36■■□□□ 1.49
CHKA-206ENST00000531341 RUFY4Q6ZNE9 571 aa24.36■■□□□ 1.49
CHKA-206ENST00000531341 FIBCD1Q8N539 461 aa24.36■■□□□ 1.49
CHKA-206ENST00000531341 LMBR1Q8WVP7 490 aa24.36■■□□□ 1.49
CHKA-206ENST00000531341 PIBF1Q8WXW3 757 aa24.36■■□□□ 1.49
CHKA-206ENST00000531341 PNMA6FA0A0J9YX94 578 aa24.35■■□□□ 1.49
CHKA-206ENST00000531341 C5orf67F2Z3F1 127 aa24.35■■□□□ 1.49
CHKA-206ENST00000531341 GTF2F1P35269 517 aaKnown RBP eCLIP24.35■■□□□ 1.491e-7■■■■□ 22.2
CHKA-206ENST00000531341 SP4Q02446 784 aa24.35■■□□□ 1.49
CHKA-206ENST00000531341 HYAL1Q12794 435 aa24.35■■□□□ 1.49
CHKA-206ENST00000531341 NEDD9Q14511 834 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms