RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 VAT1LQ9HCJ6 419 aa12.42□□□□□ -0.42
C11orf54-209ENST00000530620 BDP1A6H8Y1 2624 aa12.42□□□□□ -0.42
C11orf54-209ENST00000530620 EPOPA6NHQ4 379 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 RBAK-RBAKDNI3L0D1 243 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 TNFRSF10AO00220 468 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 RFXAPO00287 272 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 PPP1R11O60927 126 aaPredicted RBP12.41□□□□□ -0.42
C11orf54-209ENST00000530620 CFBP00751 764 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 BFSP2Q13515 415 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 STXBP2Q15833 593 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 ARHGEF16Q5VV41 709 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 SESTD1Q86VW0 696 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 MCF2L2Q86YR7 1114 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 RETREG2Q8NC44 543 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 ADAMTS19Q8TE59 1207 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 DHX38Q92620 1227 aaKnown RBP12.41□□□□□ -0.42
C11orf54-209ENST00000530620 IWS1Q96ST2 819 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 UBAC1Q9BSL1 405 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 FTOQ9C0B1 505 aaKnown RBP eCLIP12.41□□□□□ -0.42
C11orf54-209ENST00000530620 CERS4Q9HA82 394 aa12.41□□□□□ -0.42
C11orf54-209ENST00000530620 MRPL11Q9Y3B7 192 aaKnown RBP12.41□□□□□ -0.42
C11orf54-209ENST00000530620 MUC3AQ02505 3323 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 OATP04181 439 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 ZNF286BP0CG31 522 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 HSD17B4P51659 736 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 MRPS5P82675 430 aaKnown RBP12.4□□□□□ -0.42
C11orf54-209ENST00000530620 SEC23AQ15436 765 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 IFIT1BQ5T764 474 aaKnown RBP12.4□□□□□ -0.42
C11orf54-209ENST00000530620 THSD4Q6ZMP0 1018 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 CYB5R4Q7L1T6 521 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 HERC6Q8IVU3 1022 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 CAGE1Q8TC20 777 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 AMNQ9BXJ7 453 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 CNNM2Q9H8M5 875 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 PXMP2Q9NR77 195 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 CTNNA3Q9UI47 895 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 DDX41Q9UJV9 622 aaKnown RBP12.4□□□□□ -0.42
C11orf54-209ENST00000530620 BRWD1Q9NSI6 2320 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 KAT6AQ92794 2004 aa12.4□□□□□ -0.42
C11orf54-209ENST00000530620 ATG2AQ2TAZ0 1938 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 KLRF2D3W0D1 207 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 BAIAP3O94812 1187 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 F2P00734 622 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 NR3C2P08235 984 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 GSPT1P15170 499 aaKnown RBP12.39□□□□□ -0.43
C11orf54-209ENST00000530620 CASTP20810 708 aaKnown RBP12.39□□□□□ -0.43
C11orf54-209ENST00000530620 GHRHRQ02643 423 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 TAP1Q03518 808 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 RBL2Q08999 1139 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 GPNMBQ14956 572 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 DGKDQ16760 1214 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 SLC35G1Q2M3R5 365 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 KRT40Q6A162 431 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 LRRC8DQ7L1W4 858 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 SPRED2Q7Z698 418 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 CCDC155Q8N6L0 562 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 IL31RAQ8NI17 732 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 PHOSPHO2Q8TCD6 241 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 AFAP1L1Q8TED9 768 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 EMID1Q96A84 441 aaPredicted RBP12.39□□□□□ -0.43
C11orf54-209ENST00000530620 MTMR8Q96EF0 704 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 ALG1Q9BT22 464 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 HDAC6Q9UBN7 1215 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 GTF2IRD1Q9UHL9 959 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 MAD2L2Q9UI95 211 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 MRVI1Q9Y6F6 885 aa12.39□□□□□ -0.43
C11orf54-209ENST00000530620 ZBTB5O15062 677 aa12.38□□□□□ -0.43
C11orf54-209ENST00000530620 SORBS3O60504 671 aa12.38□□□□□ -0.43
C11orf54-209ENST00000530620 EIF3JO75822 258 aaKnown RBP12.38□□□□□ -0.43
C11orf54-209ENST00000530620 RGS20O76081 388 aa12.38□□□□□ -0.43
C11orf54-209ENST00000530620 SELPP16109 830 aa12.38□□□□□ -0.43
C11orf54-209ENST00000530620 HOXA13P31271 388 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-209ENST00000530620 KCNJ6P48051 423 aa12.38□□□□□ -0.43
C11orf54-209ENST00000530620 WDR5P61964 334 aaKnown RBP12.38□□□□□ -0.43
C11orf54-209ENST00000530620 TFF2Q03403 129 aa12.38□□□□□ -0.43
C11orf54-209ENST00000530620 TCTN1Q2MV58 587 aa12.38□□□□□ -0.43
C11orf54-209ENST00000530620 TTC22Q5TAA0 569 aa12.38□□□□□ -0.43
C11orf54-209ENST00000530620 TMCO2Q7Z6W1 182 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-209ENST00000530620 PPTC7Q8NI37 304 aa12.38□□□□□ -0.43
C11orf54-209ENST00000530620 ARNTL2Q8WYA1 636 aa12.38□□□□□ -0.43
C11orf54-209ENST00000530620 WNT8BQ93098 351 aa12.38□□□□□ -0.43
C11orf54-209ENST00000530620 PDCD2LQ9BRP1 358 aa12.38□□□□□ -0.43
C11orf54-209ENST00000530620 PCDHA1Q9Y5I3 950 aa12.38□□□□□ -0.43
C11orf54-209ENST00000530620 MTCH2Q9Y6C9 303 aa12.38□□□□□ -0.43
C11orf54-209ENST00000530620 LCHNA4D1U4 455 aa12.37□□□□□ -0.43
C11orf54-209ENST00000530620 HAS3O00219 553 aa12.37□□□□□ -0.43
C11orf54-209ENST00000530620 NBNO60934 754 aa12.37□□□□□ -0.43
C11orf54-209ENST00000530620 ZMYND10O75800 440 aa12.37□□□□□ -0.43
C11orf54-209ENST00000530620 CKBP12277 381 aa12.37□□□□□ -0.43
C11orf54-209ENST00000530620 MYCLP12524 364 aaPredicted RBP12.37□□□□□ -0.43
C11orf54-209ENST00000530620 DEFB103AP81534 67 aa12.37□□□□□ -0.43
C11orf54-209ENST00000530620 LAMC2Q13753 1193 aa12.37□□□□□ -0.43
C11orf54-209ENST00000530620 GRM4Q14833 912 aa12.37□□□□□ -0.43
C11orf54-209ENST00000530620 PGM5Q15124 567 aa12.37□□□□□ -0.43
C11orf54-209ENST00000530620 KIAA0753Q2KHM9 967 aa12.37□□□□□ -0.43
C11orf54-209ENST00000530620 METTL3Q86U44 580 aaKnown RBP12.37□□□□□ -0.43
C11orf54-209ENST00000530620 HOMER1Q86YM7 354 aa12.37□□□□□ -0.43
C11orf54-209ENST00000530620 DHX37Q8IY37 1157 aaKnown RBP12.37□□□□□ -0.43
C11orf54-209ENST00000530620 C7orf31Q8N865 590 aa12.37□□□□□ -0.43
C11orf54-209ENST00000530620 NECAB3Q96P71 396 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms