RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 PXMP2Q9NR77 195 aa19.03■□□□□ 0.64
CHMP4A-203ENST00000527154 MRVI1Q9Y6F6 885 aa19.03■□□□□ 0.64
CHMP4A-203ENST00000527154 SPTBN4Q9H254 2564 aa19.03■□□□□ 0.64
CHMP4A-203ENST00000527154 PROB1E7EW31 1015 aa19.02■□□□□ 0.64
CHMP4A-203ENST00000527154 GTF2F1P35269 517 aaKnown RBP eCLIP19.02■□□□□ 0.64
CHMP4A-203ENST00000527154 DHX37Q8IY37 1157 aaKnown RBP19.02■□□□□ 0.64
CHMP4A-203ENST00000527154 FIBCD1Q8N539 461 aa19.02■□□□□ 0.64
CHMP4A-203ENST00000527154 ZNF689Q96CS4 500 aaPredicted RBP19.02■□□□□ 0.64
CHMP4A-203ENST00000527154 ASIC4Q96FT7 647 aa19.02■□□□□ 0.64
CHMP4A-203ENST00000527154 ADGRA3Q8IWK6 1321 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 PTPRZ1P23471 2315 aaPredicted RBP19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 OPLAHO14841 1288 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 LINC01565O15544 149 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 TREHO43280 583 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 GFRA3O60609 400 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 CTNNB1P35222 781 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 HSD17B4P51659 736 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 COASYQ13057 564 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 CLUL1Q15846 466 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 CDC37Q16543 378 aaPredicted RBP19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 KCNV1Q6PIU1 500 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 MCF2L2Q86YR7 1114 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 ATP6V0A1Q93050 837 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 FSD1Q9BTV5 496 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 PLVAPQ9BX97 442 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 CLEC1BQ9P126 229 aa19.01■□□□□ 0.63
CHMP4A-203ENST00000527154 C17orf102A2RUQ5 167 aa19■□□□□ 0.63
CHMP4A-203ENST00000527154 UPP2O95045 317 aa19■□□□□ 0.63
CHMP4A-203ENST00000527154 FGAP02671 866 aa19■□□□□ 0.63
CHMP4A-203ENST00000527154 TGFB3P10600 412 aa19■□□□□ 0.63
CHMP4A-203ENST00000527154 PCP11498 1178 aaKnown RBP19■□□□□ 0.63
CHMP4A-203ENST00000527154 SP2Q02086 613 aa19■□□□□ 0.63
CHMP4A-203ENST00000527154 SUGP1Q8IWZ8 645 aaKnown RBP19■□□□□ 0.63
CHMP4A-203ENST00000527154 P2RX5Q93086 422 aa19■□□□□ 0.63
CHMP4A-203ENST00000527154 IRF2BPLQ9H1B7 796 aa19■□□□□ 0.63
CHMP4A-203ENST00000527154 CPVLQ9H3G5 476 aa19■□□□□ 0.63
CHMP4A-203ENST00000527154 RNPEPQ9H4A4 650 aa19■□□□□ 0.63
CHMP4A-203ENST00000527154 H3BRB1 525 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 SMIM10L2AP0DMW4 78 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 SMIM10L2BP0DMW5 78 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 EIF2AK2P19525 551 aaKnown RBP18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 NUBP1P53384 320 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 SIGLEC14Q08ET2 396 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 ARHGEF16Q5VV41 709 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 STOX1Q6ZVD7 989 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 CRIPAKQ8N1N5 446 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 SPATA33Q96N06 139 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 PDCD2LQ9BRP1 358 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 UBA5Q9GZZ9 404 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 TUT1Q9H6E5 874 aaKnown RBP18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 EHMT1Q9H9B1 1298 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 PLAGL2Q9UPG8 496 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 PLXNA3P51805 1871 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 SALL3Q9BXA9 1300 aa18.99■□□□□ 0.63
CHMP4A-203ENST00000527154 GGPS1O95749 300 aa18.98■□□□□ 0.63
CHMP4A-203ENST00000527154 GOLGA8HP0CJ92 632 aa18.98■□□□□ 0.63
CHMP4A-203ENST00000527154 HSPD1P10809 573 aaKnown RBP18.98■□□□□ 0.63
CHMP4A-203ENST00000527154 UBA1P22314 1058 aaKnown RBP18.98■□□□□ 0.63
CHMP4A-203ENST00000527154 VSIG10LQ86VR7 867 aa18.98■□□□□ 0.63
CHMP4A-203ENST00000527154 DGKHQ86XP1 1220 aa18.98■□□□□ 0.63
CHMP4A-203ENST00000527154 ADGRF4Q8IZF3 695 aa18.98■□□□□ 0.63
CHMP4A-203ENST00000527154 EFHBQ8N7U6 833 aa18.98■□□□□ 0.63
CHMP4A-203ENST00000527154 MAP3K20Q9NYL2 800 aaKnown RBP18.98■□□□□ 0.63
CHMP4A-203ENST00000527154 MRPL11Q9Y3B7 192 aaKnown RBP18.98■□□□□ 0.63
CHMP4A-203ENST00000527154 RIF1Q5UIP0 2472 aaKnown RBP18.98■□□□□ 0.63
CHMP4A-203ENST00000527154 TTC3P53804 2025 aa18.98■□□□□ 0.63
CHMP4A-203ENST00000527154 MYH7BA7E2Y1 1941 aa18.98■□□□□ 0.63
CHMP4A-203ENST00000527154 GLP2RO95838 553 aa18.97■□□□□ 0.63
CHMP4A-203ENST00000527154 VCPP55072 806 aaKnown RBP18.97■□□□□ 0.63
CHMP4A-203ENST00000527154 RRP1P56182 461 aaKnown RBP18.97■□□□□ 0.63
CHMP4A-203ENST00000527154 HNRNPUQ00839 825 aaKnown RBP eCLIP18.97■□□□□ 0.63
CHMP4A-203ENST00000527154 QRICH1Q2TAL8 776 aa18.97■□□□□ 0.63
CHMP4A-203ENST00000527154 NAALADL2Q58DX5 795 aa18.97■□□□□ 0.63
CHMP4A-203ENST00000527154 VPS13AQ96RL7 3174 aa18.96■□□□□ 0.63
CHMP4A-203ENST00000527154 CACNA1AO00555 2505 aa18.96■□□□□ 0.63
CHMP4A-203ENST00000527154 LGALS2P05162 132 aa18.96■□□□□ 0.63
CHMP4A-203ENST00000527154 CTSHP09668 335 aa18.96■□□□□ 0.63
CHMP4A-203ENST00000527154 DNAJB1P25685 340 aa18.96■□□□□ 0.63
CHMP4A-203ENST00000527154 AVPR2P30518 371 aa18.96■□□□□ 0.63
CHMP4A-203ENST00000527154 NT5C2P49902 561 aa18.96■□□□□ 0.63
CHMP4A-203ENST00000527154 SAMD3Q8N6K7 520 aa18.96■□□□□ 0.63
CHMP4A-203ENST00000527154 OTUD7AQ8TE49 926 aaPredicted RBP18.96■□□□□ 0.63
CHMP4A-203ENST00000527154 SUSD6Q92537 303 aa18.96■□□□□ 0.63
CHMP4A-203ENST00000527154 HELLSQ9NRZ9 838 aa18.96■□□□□ 0.63
CHMP4A-203ENST00000527154 FAM186AA6NE01 2351 aa18.96■□□□□ 0.63
CHMP4A-203ENST00000527154 DGKIO75912 1065 aa18.95■□□□□ 0.62
CHMP4A-203ENST00000527154 ICAM3P32942 547 aa18.95■□□□□ 0.62
CHMP4A-203ENST00000527154 RRP12Q5JTH9 1297 aaKnown RBP18.95■□□□□ 0.62
CHMP4A-203ENST00000527154 TICAM2Q86XR7 235 aa18.95■□□□□ 0.62
CHMP4A-203ENST00000527154 SPPL3Q8TCT6 385 aa18.95■□□□□ 0.62
CHMP4A-203ENST00000527154 PHF7Q9BWX1 381 aaPredicted RBP18.95■□□□□ 0.62
CHMP4A-203ENST00000527154 FAM86C1Q9NVL1 165 aa18.95■□□□□ 0.62
CHMP4A-203ENST00000527154 ENPP3O14638 875 aa18.94■□□□□ 0.62
CHMP4A-203ENST00000527154 CHRNA1P02708 482 aa18.94■□□□□ 0.62
CHMP4A-203ENST00000527154 ATF7P17544 494 aaPredicted RBP18.94■□□□□ 0.62
CHMP4A-203ENST00000527154 NDUFV1P49821 464 aa18.94■□□□□ 0.62
CHMP4A-203ENST00000527154 MGAT3Q09327 533 aa18.94■□□□□ 0.62
CHMP4A-203ENST00000527154 PGM5Q15124 567 aa18.94■□□□□ 0.62
CHMP4A-203ENST00000527154 ADGRD2Q7Z7M1 963 aa18.94■□□□□ 0.62
CHMP4A-203ENST00000527154 IL31RAQ8NI17 732 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms