RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 HOXC8P31273 242 aa12.37□□□□□ -0.43
VPS26B-203ENST00000525918 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
VPS26B-203ENST00000525918 GNPTABQ3T906 1256 aa12.37□□□□□ -0.43
VPS26B-203ENST00000525918 PLEKHG4Q58EX7 1191 aa12.37□□□□□ -0.43
VPS26B-203ENST00000525918 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.37□□□□□ -0.43
VPS26B-203ENST00000525918 FCHSD1Q86WN1 690 aa12.37□□□□□ -0.43
VPS26B-203ENST00000525918 GPKOWQ92917 476 aaPredicted RBP eCLIP12.37□□□□□ -0.43
VPS26B-203ENST00000525918 ZFP91Q96JP5 570 aaPredicted RBP12.37□□□□□ -0.43
VPS26B-203ENST00000525918 RNPEPQ9H4A4 650 aa12.37□□□□□ -0.43
VPS26B-203ENST00000525918 RALGAPA2Q2PPJ7 1873 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 BRWD1Q9NSI6 2320 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 NOP56O00567 594 aaKnown RBP12.36□□□□□ -0.43
VPS26B-203ENST00000525918 CYTH3O43739 400 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 CAND2O75155 1236 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 LGALS2P05162 132 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 SMIM10L2AP0DMW4 78 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 SMIM10L2BP0DMW5 78 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 GNAT1P11488 350 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 ICAM3P32942 547 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 PLA2G5P39877 138 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 HTRA4P83105 476 aaPredicted RBP12.36□□□□□ -0.43
VPS26B-203ENST00000525918 TROAPQ12815 778 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 NEDD9Q14511 834 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 SART3Q15020 963 aaKnown RBP12.36□□□□□ -0.43
VPS26B-203ENST00000525918 SLC35G1Q2M3R5 365 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 MYOCDQ8IZQ8 938 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 FBXO22Q8NEZ5 403 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 EXOC6Q8TAG9 804 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 RUFY2Q8WXA3 655 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 FAM122AQ96E09 287 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 EPHX3Q9H6B9 360 aa12.36□□□□□ -0.43
VPS26B-203ENST00000525918 SPATA31C2B4DYI2 1134 aa12.35□□□□□ -0.43
VPS26B-203ENST00000525918 TREHO43280 583 aa12.35□□□□□ -0.43
VPS26B-203ENST00000525918 CYP21A2P08686 494 aa12.35□□□□□ -0.43
VPS26B-203ENST00000525918 MRPS9P82933 396 aaKnown RBP12.35□□□□□ -0.43
VPS26B-203ENST00000525918 WTAPQ15007 396 aa12.35□□□□□ -0.43
VPS26B-203ENST00000525918 METTL7BQ6UX53 244 aa12.35□□□□□ -0.43
VPS26B-203ENST00000525918 CYFIP1Q7L576 1253 aa12.35□□□□□ -0.43
VPS26B-203ENST00000525918 RALYLQ86SE5 291 aaKnown RBP12.35□□□□□ -0.43
VPS26B-203ENST00000525918 NCOA7Q8NI08 942 aa12.35□□□□□ -0.43
VPS26B-203ENST00000525918 SP7Q8TDD2 431 aaPredicted RBP12.35□□□□□ -0.43
VPS26B-203ENST00000525918 SEPT8Q92599 483 aa12.35□□□□□ -0.43
VPS26B-203ENST00000525918 TOP1MTQ969P6 601 aa12.35□□□□□ -0.43
VPS26B-203ENST00000525918 SAMD11Q96NU1 681 aa12.35□□□□□ -0.43
VPS26B-203ENST00000525918 INPP4AQ96PE3 977 aaPredicted RBP12.35□□□□□ -0.43
VPS26B-203ENST00000525918 C17orf80Q9BSJ5 609 aa12.35□□□□□ -0.43
VPS26B-203ENST00000525918 LRFN3Q9BTN0 628 aa12.35□□□□□ -0.43
VPS26B-203ENST00000525918 BCAS3Q9H6U6 928 aa12.35□□□□□ -0.43
VPS26B-203ENST00000525918 UBE2ZQ9H832 354 aaPredicted RBP12.35□□□□□ -0.43
VPS26B-203ENST00000525918 ARIH1Q9Y4X5 557 aaPredicted RBP12.35□□□□□ -0.43
VPS26B-203ENST00000525918 FRMPD4Q14CM0 1322 aa12.35□□□□□ -0.43
VPS26B-203ENST00000525918 E7EWF7 191 aa12.34□□□□□ -0.43
VPS26B-203ENST00000525918 FIBPO43427 364 aa12.34□□□□□ -0.43
VPS26B-203ENST00000525918 PTH1RQ03431 593 aa12.34□□□□□ -0.43
VPS26B-203ENST00000525918 PTPROQ16827 1216 aa12.34□□□□□ -0.43
VPS26B-203ENST00000525918 LEXMQ3ZCV2 418 aa12.34□□□□□ -0.43
VPS26B-203ENST00000525918 EPC2Q52LR7 807 aa12.34□□□□□ -0.43
VPS26B-203ENST00000525918 TMEM31Q5JXX7 168 aa12.34□□□□□ -0.43
VPS26B-203ENST00000525918 TTC22Q5TAA0 569 aa12.34□□□□□ -0.43
VPS26B-203ENST00000525918 CATIPQ7Z7H3 387 aa12.34□□□□□ -0.43
VPS26B-203ENST00000525918 MRPL38Q96DV4 380 aaKnown RBP12.34□□□□□ -0.43
VPS26B-203ENST00000525918 GPR20Q99678 358 aa12.34□□□□□ -0.43
VPS26B-203ENST00000525918 SENP2Q9HC62 589 aa12.34□□□□□ -0.43
VPS26B-203ENST00000525918 SETD4Q9NVD3 440 aa12.34□□□□□ -0.43
VPS26B-203ENST00000525918 RTEL1Q9NZ71 1219 aa12.34□□□□□ -0.43
VPS26B-203ENST00000525918 COL4A6Q14031 1691 aa12.33□□□□□ -0.44
VPS26B-203ENST00000525918 GPR37L1O60883 481 aa12.33□□□□□ -0.44
VPS26B-203ENST00000525918 UPP2O95045 317 aa12.33□□□□□ -0.44
VPS26B-203ENST00000525918 GSPT1P15170 499 aaKnown RBP12.33□□□□□ -0.44
VPS26B-203ENST00000525918 KCNA5P22460 613 aa12.33□□□□□ -0.44
VPS26B-203ENST00000525918 XRRA1Q6P2D8 792 aa12.33□□□□□ -0.44
VPS26B-203ENST00000525918 GIMAP8Q8ND71 665 aaPredicted RBP12.33□□□□□ -0.44
VPS26B-203ENST00000525918 SMARCC2Q8TAQ2 1214 aa12.33□□□□□ -0.44
VPS26B-203ENST00000525918 IGDCC4Q8TDY8 1250 aa12.33□□□□□ -0.44
VPS26B-203ENST00000525918 APBB2Q92870 758 aa12.33□□□□□ -0.44
VPS26B-203ENST00000525918 YME1L1Q96TA2 773 aa12.33□□□□□ -0.44
VPS26B-203ENST00000525918 MAP3K14Q99558 947 aa12.33□□□□□ -0.44
VPS26B-203ENST00000525918 SENP7Q9BQF6 1050 aa12.33□□□□□ -0.44
VPS26B-203ENST00000525918 ZNF215Q9UL58 517 aaPredicted RBP12.33□□□□□ -0.44
VPS26B-203ENST00000525918 HCN4Q9Y3Q4 1203 aa12.33□□□□□ -0.44
VPS26B-203ENST00000525918 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.32□□□□□ -0.44
VPS26B-203ENST00000525918 PI4K2BG5E9Z4 385 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 H3BNC9 293 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 RBAK-RBAKDNI3L0D1 243 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 PIK3CDO00329 1044 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 CTSHP09668 335 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 CHMLP26374 656 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 PDE4AP27815 886 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 SMARCA1P28370 1054 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 ADAM17P78536 824 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 SEMA3FQ13275 785 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 PUS10Q3MIT2 529 aaKnown RBP12.32□□□□□ -0.44
VPS26B-203ENST00000525918 FAM26DQ5JW98 314 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 PCNX4Q63HM2 1172 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 FAM178BQ8IXR5 827 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 TMEM192Q8IY95 271 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.32□□□□□ -0.44
VPS26B-203ENST00000525918 PIBF1Q8WXW3 757 aa12.32□□□□□ -0.44
VPS26B-203ENST00000525918 KHSRPQ92945 711 aaKnown RBP eCLIP12.32□□□□□ -0.44
VPS26B-203ENST00000525918 CUL5Q93034 780 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms